Integrated multi-omics analysis of oligodendroglial tumours identifies three subgroups of 1p/19q co-deleted gliomas View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2016-04-19

AUTHORS

Aurélie Kamoun, Ahmed Idbaih, Caroline Dehais, Nabila Elarouci, Catherine Carpentier, Eric Letouzé, Carole Colin, Karima Mokhtari, Anne Jouvet, Emmanuelle Uro-Coste, Nadine Martin-Duverneuil, Marc Sanson, Jean-Yves Delattre, Dominique Figarella-Branger, Aurélien de Reyniès, François Ducray, POLA network, Clovis Adam, Marie Andraud, Marie-Hélène Aubriot-Lorton, Luc Bauchet, Patrick Beauchesne, Franck Bielle, Claire Blechet, Mario Campone, Antoine F. Carpentier, Ioana Carpiuc, Dominique Cazals-Hatem, Marie-Pierre Chenard, Danchristian Chiforeanu, Olivier Chinot, Elisabeth Cohen-Moyal, Philippe Colin, Phong Dam-Hieu, Christine Desenclos, Nicolas Desse, Frederic Dhermain, Marie-Danièle Diebold, Sandrine Eimer, Thierry Faillot, Mélanie Fesneau, Denys Fontaine, Stéphane Gaillard, Guillaume Gauchotte, Claude Gaultier, François Ghiringhelli, Joel Godard, Edouard Marcel Gueye, Jean Sebastien Guillamo, Selma Hamdi-Elouadhani, Jerome Honnorat, Jean Louis Kemeny, Toufik Khallil, François Labrousse, Olivier Langlois, Annie Laquerriere, Delphine Larrieu-Ciron, Emmanuelle Lechapt-Zalcman, Caroline Le Guérinel, Pierre-Marie Levillain, Hugues Loiseau, Delphine Loussouarn, Claude-Alain Maurage, Philippe Menei, Marie Janette Motsuo Fotso, Georges Noel, Fabrice Parker, Michel Peoc'h, Marc Polivka, Isabelle Quintin-Roué, Carole Ramirez, Damien Ricard, Pomone Richard, Valérie Rigau, Audrey Rousseau, Gwenaelle Runavot, Henri Sevestre, Marie Christine Tortel, Fanny Vandenbos, Elodie Vauleon, Gabriel Viennet, Chiara Villa

ABSTRACT

Oligodendroglial tumours (OT) are a heterogeneous group of gliomas. Three molecular subgroups are currently distinguished on the basis of the IDH mutation and 1p/19q co-deletion. Here we present an integrated analysis of the transcriptome, genome and methylome of 156 OT. Not only does our multi-omics classification match the current classification but also reveals three subgroups within 1p/19q co-deleted tumours, associated with specific expression patterns of nervous system cell types: oligodendrocyte, oligodendrocyte precursor cell (OPC) and neuronal lineage. We confirm the validity of these three subgroups using public datasets. Importantly, the OPC-like group is associated with more aggressive clinical and molecular patterns, including MYC activation. We show that the MYC activation occurs through various alterations, including MYC genomic gain, MAX genomic loss, MYC hypomethylation and microRNA-34b/c down-regulation. In the lower grade glioma TCGA dataset, the OPC-like group is associated with a poorer outcome independently of histological grade. Our study reveals previously unrecognized heterogeneity among 1p/19q co-deleted tumours. More... »

PAGES

11263

References to SciGraph publications

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  • Journal

    TITLE

    Nature Communications

    ISSUE

    N/A

    VOLUME

    7

    Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ncomms11263

    DOI

    http://dx.doi.org/10.1038/ncomms11263

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1040691349

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/27090007


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