Dereplication of peptidic natural products through database search of mass spectra View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2016-10-31

AUTHORS

Hosein Mohimani, Alexey Gurevich, Alla Mikheenko, Neha Garg, Louis-Felix Nothias, Akihiro Ninomiya, Kentaro Takada, Pieter C Dorrestein, Pavel A Pevzner

ABSTRACT

Aggregated mass spectral data by consortia such as the Global Natural Products Social (GNPS) molecular networking infrastructure enable natural product discovery. DEREPLICATOR, validated on peptidic natural products, is a computational tool to identify known metabolites in complex samples.

PAGES

30-37

References to SciGraph publications

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  • 1994-11-01. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database in JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
  • 2011-10-09. A mass spectrometry–guided genome mining approach for natural product peptidogenomics in NATURE CHEMICAL BIOLOGY
  • 2015-08-18. A chemocentric view of the natural product inventory in NATURE CHEMICAL BIOLOGY
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  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/nchembio.2219

    DOI

    http://dx.doi.org/10.1038/nchembio.2219

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1043661254

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/27820803


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