Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2006-08

AUTHORS

Susanne Schneiker, Vítor AP Martins dos Santos, Daniela Bartels, Thomas Bekel, Martina Brecht, Jens Buhrmester, Tatyana N Chernikova, Renata Denaro, Manuel Ferrer, Christoph Gertler, Alexander Goesmann, Olga V Golyshina, Filip Kaminski, Amit N Khachane, Siegmund Lang, Burkhard Linke, Alice C McHardy, Folker Meyer, Taras Nechitaylo, Alfred Pühler, Daniela Regenhardt, Oliver Rupp, Julia S Sabirova, Werner Selbitschka, Michail M Yakimov, Kenneth N Timmis, Frank-Jörg Vorhölter, Stefan Weidner, Olaf Kaiser, Peter N Golyshin

ABSTRACT

Alcanivorax borkumensis is a cosmopolitan marine bacterium that uses oil hydrocarbons as its exclusive source of carbon and energy. Although barely detectable in unpolluted environments, A. borkumensis becomes the dominant microbe in oil-polluted waters. A. borkumensis SK2 has a streamlined genome with a paucity of mobile genetic elements and energy generation-related genes, but with a plethora of genes accounting for its wide hydrocarbon substrate range and efficient oil-degradation capabilities. The genome further specifies systems for scavenging of nutrients, particularly organic and inorganic nitrogen and oligo-elements, biofilm formation at the oil-water interface, biosurfactant production and niche-specific stress responses. The unique combination of these features provides A. borkumensis SK2 with a competitive edge in oil-polluted environments. This genome sequence provides the basis for the future design of strategies to mitigate the ecological damage caused by oil spills. More... »

PAGES

997-1004

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nbt1232

DOI

http://dx.doi.org/10.1038/nbt1232

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1004032284

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/16878126


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