Unusual biology across a group comprising more than 15% of domain Bacteria View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2015-06-15

AUTHORS

Christopher T. Brown, Laura A. Hug, Brian C. Thomas, Itai Sharon, Cindy J. Castelle, Andrea Singh, Michael J. Wilkins, Kelly C. Wrighton, Kenneth H. Williams, Jillian F. Banfield

ABSTRACT

More than 15% of the bacterial domain consists of a radiation of phyla about which very little is known; here, metagenomics is used to reconstruct 8 complete and 789 draft genomes from more than 35 of these phyla, revealing a shared evolutionary history, metabolic limitations, and unusual ribosome compositions.

PAGES

208-211

References to SciGraph publications

  • 2014-08-14. Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences in NATURE REVIEWS MICROBIOLOGY
  • 2009-08-21. Community-wide analysis of microbial genome sequence signatures in GENOME BIOLOGY
  • 2012-03-08. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2013-08-05. Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling in MICROBIOME
  • 2010. Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project in ENVIRONMENTAL MICROBIOME
  • 2013-05-26. Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes in NATURE BIOTECHNOLOGY
  • 2015-02-27. Diverse uncultivated ultra-small bacterial cells in groundwater in NATURE COMMUNICATIONS
  • 2007-01-15. Prediction of effective genome size in metagenomic samples in GENOME BIOLOGY
  • 2014-03-13. Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2009-02-26. Protein structure prediction on the Web: a case study using the Phyre server in NATURE PROTOCOLS
  • 2013-08-27. Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment in NATURE COMMUNICATIONS
  • 2002-01-17. The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs in BMC BIOINFORMATICS
  • 2010-03-08. Prodigal: prokaryotic gene recognition and translation initiation site identification in BMC BIOINFORMATICS
  • 2013-07-14. Insights into the phylogeny and coding potential of microbial dark matter in NATURE
  • 2012-10-04. Iron-reducing bacteria accumulate ferric oxyhydroxide nanoparticle aggregates that may support planktonic growth in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2012-03-04. Fast gapped-read alignment with Bowtie 2 in NATURE METHODS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/nature14486

    DOI

    http://dx.doi.org/10.1038/nature14486

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1029031769

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/26083755


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