Functional metagenomic profiling of nine biomes View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2008-03-12

AUTHORS

Elizabeth A. Dinsdale, Robert A. Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M. Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren McDaniel, Mary Ann Moran, Karen E. Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran Rodriguez Brito, Yijun Ruan, Brandon K. Swan, Rick Stevens, David L. Valentine, Rebecca Vega Thurber, Linda Wegley, Bryan A. White, Forest Rohwer

ABSTRACT

Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts. More... »

PAGES

629-632

Journal

TITLE

Nature

ISSUE

7187

VOLUME

452

Clinical Trials linked to this publication

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nature06810

DOI

http://dx.doi.org/10.1038/nature06810

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1047805213

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/18337718


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0605", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Animals", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Anthozoa", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Archaea", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Bacteria", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Chemotaxis", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Computational Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Culicidae", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Ecosystem", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Fishes", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Fresh Water", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Gene Expression Profiling", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Archaeal", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Viral", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genomics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Seawater", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Viruses", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia", 
          "id": "http://www.grid.ac/institutes/grid.1014.4", 
          "name": [
            "Department of Biology,", 
            "School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Dinsdale", 
        "givenName": "Elizabeth A.", 
        "id": "sg:person.01040724241.02", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01040724241.02"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Department of Biology,", 
            "Center for Microbial Sciences,", 
            "Department of Computer Sciences, and", 
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Edwards", 
        "givenName": "Robert A.", 
        "id": "sg:person.01136331207.33", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136331207.33"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hall", 
        "givenName": "Dana", 
        "id": "sg:person.01004505617.97", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01004505617.97"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA", 
          "id": "http://www.grid.ac/institutes/grid.263081.e", 
          "name": [
            "Department of Biology,", 
            "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Angly", 
        "givenName": "Florent", 
        "id": "sg:person.01070216007.87", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070216007.87"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Breitbart", 
        "givenName": "Mya", 
        "id": "sg:person.01021303536.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021303536.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Animal Sciences, and", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Animal Sciences, and"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brulc", 
        "givenName": "Jennifer M.", 
        "id": "sg:person.01062533764.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01062533764.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Furlan", 
        "givenName": "Mike", 
        "id": "sg:person.01362257306.84", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01362257306.84"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Present address: Unit\u00e9 des Rickettsies, CNRS-UMR 6020, Facult\u00e9 de m\u00e9decine, 13385 Marseille, France.", 
          "id": "http://www.grid.ac/institutes/grid.5399.6", 
          "name": [
            "Department of Biology,", 
            "Present address: Unit\u00e9 des Rickettsies, CNRS-UMR 6020, Facult\u00e9 de m\u00e9decine, 13385 Marseille, France."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Desnues", 
        "givenName": "Christelle", 
        "id": "sg:person.01336527215.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01336527215.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Haynes", 
        "givenName": "Matthew", 
        "id": "sg:person.0636653206.93", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0636653206.93"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li", 
        "givenName": "Linlin", 
        "id": "sg:person.01313105165.66", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01313105165.66"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McDaniel", 
        "givenName": "Lauren", 
        "id": "sg:person.01044565341.40", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044565341.40"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA", 
          "id": "http://www.grid.ac/institutes/grid.213876.9", 
          "name": [
            "Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Moran", 
        "givenName": "Mary Ann", 
        "id": "sg:person.01215610154.59", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215610154.59"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA", 
          "id": "http://www.grid.ac/institutes/grid.469946.0", 
          "name": [
            "The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nelson", 
        "givenName": "Karen E.", 
        "id": "sg:person.01213406210.22", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01213406210.22"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore", 
          "id": "http://www.grid.ac/institutes/grid.418377.e", 
          "name": [
            "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nilsson", 
        "givenName": "Christina", 
        "id": "sg:person.01227127141.38", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227127141.38"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Olson", 
        "givenName": "Robert", 
        "id": "sg:person.01021612334.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021612334.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Paul", 
        "givenName": "John", 
        "id": "sg:person.014422704722.99", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014422704722.99"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA", 
          "id": "http://www.grid.ac/institutes/grid.263081.e", 
          "name": [
            "Department of Biology,", 
            "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brito", 
        "givenName": "Beltran Rodriguez", 
        "id": "sg:person.0617751441.06", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0617751441.06"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore", 
          "id": "http://www.grid.ac/institutes/grid.418377.e", 
          "name": [
            "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ruan", 
        "givenName": "Yijun", 
        "id": "sg:person.013335137357.86", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013335137357.86"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA", 
          "id": "http://www.grid.ac/institutes/grid.133342.4", 
          "name": [
            "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Swan", 
        "givenName": "Brandon K.", 
        "id": "sg:person.01147435060.08", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01147435060.08"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stevens", 
        "givenName": "Rick", 
        "id": "sg:person.0707416220.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0707416220.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA", 
          "id": "http://www.grid.ac/institutes/grid.133342.4", 
          "name": [
            "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Valentine", 
        "givenName": "David L.", 
        "id": "sg:person.0616303347.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616303347.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Thurber", 
        "givenName": "Rebecca Vega", 
        "id": "sg:person.01351411217.16", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01351411217.16"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wegley", 
        "givenName": "Linda", 
        "id": "sg:person.0661532307.68", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661532307.68"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA", 
          "id": "http://www.grid.ac/institutes/grid.35403.31", 
          "name": [
            "Department of Animal Sciences, and", 
            "The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "White", 
        "givenName": "Bryan A.", 
        "id": "sg:person.01140156265.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140156265.31"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Center for Microbial Sciences,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,", 
            "Center for Microbial Sciences,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rohwer", 
        "givenName": "Forest", 
        "id": "sg:person.0606340210.26", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0606340210.26"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1038/4441022a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018798093", 
          "https://doi.org/10.1038/4441022a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature04435", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000290333", 
          "https://doi.org/10.1038/nature04435"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-7-57", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020041008", 
          "https://doi.org/10.1186/1471-2164-7-57"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03959", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021574562", 
          "https://doi.org/10.1038/nature03959"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrg1709", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017719492", 
          "https://doi.org/10.1038/nrg1709"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/424741a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031785841", 
          "https://doi.org/10.1038/424741a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrm1524", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017946773", 
          "https://doi.org/10.1038/nrm1524"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrmicro1643", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003287226", 
          "https://doi.org/10.1038/nrmicro1643"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-9-386", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006083026", 
          "https://doi.org/10.1186/1471-2105-9-386"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2008-03-12", 
    "datePublishedReg": "2008-03-12", 
    "description": "Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts.", 
    "genre": "article", 
    "id": "sg:pub.10.1038/nature06810", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1018957", 
        "issn": [
          "0028-0836", 
          "1476-4687"
        ], 
        "name": "Nature", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "7187", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "452"
      }
    ], 
    "keywords": [
      "metabolic capabilities", 
      "comparative metagenomic study", 
      "functional metagenomic profiling", 
      "different ecosystem types", 
      "microbial genomes", 
      "microbial hosts", 
      "gene pool", 
      "coral reefs", 
      "metagenomic studies", 
      "microbial fingerprints", 
      "metagenomic profiling", 
      "ecosystem types", 
      "metabolic traits", 
      "surprising array", 
      "genome", 
      "reefs", 
      "genes", 
      "biome", 
      "distinct types", 
      "traits", 
      "ecosystems", 
      "microbiome", 
      "profiling", 
      "host", 
      "sequence", 
      "pool", 
      "virus", 
      "River", 
      "types", 
      "fingerprints", 
      "environment", 
      "analysis", 
      "array", 
      "study", 
      "capability", 
      "mine", 
      "deep mines", 
      "roster"
    ], 
    "name": "Functional metagenomic profiling of nine biomes", 
    "pagination": "629-632", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1047805213"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/nature06810"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "18337718"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/nature06810", 
      "https://app.dimensions.ai/details/publication/pub.1047805213"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-09-02T15:53", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20220902/entities/gbq_results/article/article_459.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1038/nature06810"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/nature06810'


 

This table displays all metadata directly associated to this object as RDF triples.

416 TRIPLES      21 PREDICATES      90 URIs      73 LITERALS      25 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/nature06810 schema:about N13367de463b64e019d5779e9a95d53fa
2 N25734a7149434366b476fc33c6c19cde
3 N30866556b578464494d6a7b0d85073c2
4 N3353dc165abb4c148d19731688c35eb5
5 N3aea244f9c434ed684381ae691a3a8d0
6 N5be8c8f6844246d38b9688a45ab8cb55
7 N6204710575d24e8898e8f83d14d423ed
8 N6999a3ada99b4d8da250e08435ab501f
9 N781cdd91460c458d9e548de25e429f8f
10 N81ccca29286c49c9b9e12dd08021b127
11 N8852488ca55a490db63ab00627d43c39
12 N8fadde76f8ca41488d053bffeea30539
13 Na2ce6c617cf847cd984e1e8dbfb14e5c
14 Na4025c68809f4c50b4f7449ddae3a909
15 Ncf090c48991946c0aca2a59a5e494123
16 Nd44c19e76bcf4718b0b6ac71863aff31
17 Nd89a832226d14518b2fa2815fc526e62
18 Ndb4ada5208b5412cabaae30354555e4a
19 anzsrc-for:06
20 anzsrc-for:0605
21 schema:author N99d2f17fdd1b47e4b91902b3c3fe636a
22 schema:citation sg:pub.10.1038/424741a
23 sg:pub.10.1038/4441022a
24 sg:pub.10.1038/nature03959
25 sg:pub.10.1038/nature04435
26 sg:pub.10.1038/nrg1709
27 sg:pub.10.1038/nrm1524
28 sg:pub.10.1038/nrmicro1643
29 sg:pub.10.1186/1471-2105-9-386
30 sg:pub.10.1186/1471-2164-7-57
31 schema:datePublished 2008-03-12
32 schema:datePublishedReg 2008-03-12
33 schema:description Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts.
34 schema:genre article
35 schema:isAccessibleForFree false
36 schema:isPartOf N5f6ebaf21b39401f8702afac8fa88298
37 N9d8d41f8fce843a6acbe6e3721f4d657
38 sg:journal.1018957
39 schema:keywords River
40 analysis
41 array
42 biome
43 capability
44 comparative metagenomic study
45 coral reefs
46 deep mines
47 different ecosystem types
48 distinct types
49 ecosystem types
50 ecosystems
51 environment
52 fingerprints
53 functional metagenomic profiling
54 gene pool
55 genes
56 genome
57 host
58 metabolic capabilities
59 metabolic traits
60 metagenomic profiling
61 metagenomic studies
62 microbial fingerprints
63 microbial genomes
64 microbial hosts
65 microbiome
66 mine
67 pool
68 profiling
69 reefs
70 roster
71 sequence
72 study
73 surprising array
74 traits
75 types
76 virus
77 schema:name Functional metagenomic profiling of nine biomes
78 schema:pagination 629-632
79 schema:productId N108576559434451888466e9e489b24be
80 N1b5133f9c9364c30b336741152c65beb
81 Ndd70e4d7a6394c2a8f5d00622e763207
82 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047805213
83 https://doi.org/10.1038/nature06810
84 schema:sdDatePublished 2022-09-02T15:53
85 schema:sdLicense https://scigraph.springernature.com/explorer/license/
86 schema:sdPublisher N7eedcd413364491eaf63369ab462c263
87 schema:url https://doi.org/10.1038/nature06810
88 sgo:license sg:explorer/license/
89 sgo:sdDataset articles
90 rdf:type schema:ScholarlyArticle
91 N00f1d39b598941e8a16b86263a0e4700 rdf:first sg:person.01351411217.16
92 rdf:rest N61c9280e47ed498fb0980e9e101be1d7
93 N0ef51fffc42b46d5902b463fac4d9b08 rdf:first sg:person.01215610154.59
94 rdf:rest N0ff0d39cadcc40a8a8858588a5072de7
95 N0ff0d39cadcc40a8a8858588a5072de7 rdf:first sg:person.01213406210.22
96 rdf:rest Ne69bb78b3da14498a2f5a51f9e865829
97 N108134cbe746447bafdd11e582629342 rdf:first sg:person.0617751441.06
98 rdf:rest N8c1a3bbc44ca45829b3283e0d30ab40e
99 N108576559434451888466e9e489b24be schema:name dimensions_id
100 schema:value pub.1047805213
101 rdf:type schema:PropertyValue
102 N1167172c31154d01be8ae80b483547b6 rdf:first sg:person.01362257306.84
103 rdf:rest Ned72138ce61540439a32b80bdde5b012
104 N13367de463b64e019d5779e9a95d53fa schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
105 schema:name Seawater
106 rdf:type schema:DefinedTerm
107 N1b5133f9c9364c30b336741152c65beb schema:name doi
108 schema:value 10.1038/nature06810
109 rdf:type schema:PropertyValue
110 N1d1d5758e65e49d08769a83a55fa0941 rdf:first sg:person.01062533764.12
111 rdf:rest N1167172c31154d01be8ae80b483547b6
112 N25734a7149434366b476fc33c6c19cde schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
113 schema:name Animals
114 rdf:type schema:DefinedTerm
115 N30866556b578464494d6a7b0d85073c2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
116 schema:name Fishes
117 rdf:type schema:DefinedTerm
118 N3353dc165abb4c148d19731688c35eb5 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
119 schema:name Gene Expression Profiling
120 rdf:type schema:DefinedTerm
121 N3aea244f9c434ed684381ae691a3a8d0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
122 schema:name Ecosystem
123 rdf:type schema:DefinedTerm
124 N3b47137eb15b49bc82d6c71bc814a2cf rdf:first sg:person.0707416220.12
125 rdf:rest N934b55c367724c63b41dd32991923ec1
126 N4a00a844321b4abfb82cdef7196a841c rdf:first sg:person.01313105165.66
127 rdf:rest N74a4aeaa0c854f4fb12c67d5390ab90d
128 N4b9bdd9e6af648b7a807e7fe4d13e373 rdf:first sg:person.01140156265.31
129 rdf:rest Na9db1de9980d48a997621c9f7f1e859a
130 N5be8c8f6844246d38b9688a45ab8cb55 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
131 schema:name Genome, Archaeal
132 rdf:type schema:DefinedTerm
133 N5f6ebaf21b39401f8702afac8fa88298 schema:volumeNumber 452
134 rdf:type schema:PublicationVolume
135 N61c9280e47ed498fb0980e9e101be1d7 rdf:first sg:person.0661532307.68
136 rdf:rest N4b9bdd9e6af648b7a807e7fe4d13e373
137 N6204710575d24e8898e8f83d14d423ed schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
138 schema:name Genomics
139 rdf:type schema:DefinedTerm
140 N62e089e81f284e36af42ac834f562d05 rdf:first sg:person.01070216007.87
141 rdf:rest N66633196b56e490fb7134be37fd49cec
142 N66633196b56e490fb7134be37fd49cec rdf:first sg:person.01021303536.04
143 rdf:rest N1d1d5758e65e49d08769a83a55fa0941
144 N6999a3ada99b4d8da250e08435ab501f schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
145 schema:name Fresh Water
146 rdf:type schema:DefinedTerm
147 N74a4aeaa0c854f4fb12c67d5390ab90d rdf:first sg:person.01044565341.40
148 rdf:rest N0ef51fffc42b46d5902b463fac4d9b08
149 N75310825619b42bc87588eeeba0d97d1 rdf:first sg:person.01147435060.08
150 rdf:rest N3b47137eb15b49bc82d6c71bc814a2cf
151 N781cdd91460c458d9e548de25e429f8f schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
152 schema:name Genome, Bacterial
153 rdf:type schema:DefinedTerm
154 N7eedcd413364491eaf63369ab462c263 schema:name Springer Nature - SN SciGraph project
155 rdf:type schema:Organization
156 N7fc4902be8f14462a8b2b4033f62e182 rdf:first sg:person.01136331207.33
157 rdf:rest N8d1173f2dc6c41ec96f75336add4edde
158 N81ccca29286c49c9b9e12dd08021b127 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
159 schema:name Anthozoa
160 rdf:type schema:DefinedTerm
161 N8852488ca55a490db63ab00627d43c39 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
162 schema:name Archaea
163 rdf:type schema:DefinedTerm
164 N8c1a3bbc44ca45829b3283e0d30ab40e rdf:first sg:person.013335137357.86
165 rdf:rest N75310825619b42bc87588eeeba0d97d1
166 N8d1173f2dc6c41ec96f75336add4edde rdf:first sg:person.01004505617.97
167 rdf:rest N62e089e81f284e36af42ac834f562d05
168 N8dd5eec88d674bbf97208b040dd1bfc2 rdf:first sg:person.014422704722.99
169 rdf:rest N108134cbe746447bafdd11e582629342
170 N8fadde76f8ca41488d053bffeea30539 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
171 schema:name Bacteria
172 rdf:type schema:DefinedTerm
173 N8faea63a2d524eb0bc477a53f39185df rdf:first sg:person.0636653206.93
174 rdf:rest N4a00a844321b4abfb82cdef7196a841c
175 N934b55c367724c63b41dd32991923ec1 rdf:first sg:person.0616303347.04
176 rdf:rest N00f1d39b598941e8a16b86263a0e4700
177 N99d2f17fdd1b47e4b91902b3c3fe636a rdf:first sg:person.01040724241.02
178 rdf:rest N7fc4902be8f14462a8b2b4033f62e182
179 N9d8d41f8fce843a6acbe6e3721f4d657 schema:issueNumber 7187
180 rdf:type schema:PublicationIssue
181 Na2ce6c617cf847cd984e1e8dbfb14e5c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
182 schema:name Microbiology
183 rdf:type schema:DefinedTerm
184 Na4025c68809f4c50b4f7449ddae3a909 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
185 schema:name Chemotaxis
186 rdf:type schema:DefinedTerm
187 Na9db1de9980d48a997621c9f7f1e859a rdf:first sg:person.0606340210.26
188 rdf:rest rdf:nil
189 Nc751979ea13d416ab8e6df4da7acbd9b rdf:first sg:person.01021612334.04
190 rdf:rest N8dd5eec88d674bbf97208b040dd1bfc2
191 Ncf090c48991946c0aca2a59a5e494123 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
192 schema:name Culicidae
193 rdf:type schema:DefinedTerm
194 Nd44c19e76bcf4718b0b6ac71863aff31 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
195 schema:name Genome, Viral
196 rdf:type schema:DefinedTerm
197 Nd89a832226d14518b2fa2815fc526e62 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
198 schema:name Computational Biology
199 rdf:type schema:DefinedTerm
200 Ndb4ada5208b5412cabaae30354555e4a schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
201 schema:name Viruses
202 rdf:type schema:DefinedTerm
203 Ndd70e4d7a6394c2a8f5d00622e763207 schema:name pubmed_id
204 schema:value 18337718
205 rdf:type schema:PropertyValue
206 Ne69bb78b3da14498a2f5a51f9e865829 rdf:first sg:person.01227127141.38
207 rdf:rest Nc751979ea13d416ab8e6df4da7acbd9b
208 Ned72138ce61540439a32b80bdde5b012 rdf:first sg:person.01336527215.04
209 rdf:rest N8faea63a2d524eb0bc477a53f39185df
210 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
211 schema:name Biological Sciences
212 rdf:type schema:DefinedTerm
213 anzsrc-for:0605 schema:inDefinedTermSet anzsrc-for:
214 schema:name Microbiology
215 rdf:type schema:DefinedTerm
216 sg:journal.1018957 schema:issn 0028-0836
217 1476-4687
218 schema:name Nature
219 schema:publisher Springer Nature
220 rdf:type schema:Periodical
221 sg:person.01004505617.97 schema:affiliation grid-institutes:None
222 schema:familyName Hall
223 schema:givenName Dana
224 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01004505617.97
225 rdf:type schema:Person
226 sg:person.01021303536.04 schema:affiliation grid-institutes:grid.170693.a
227 schema:familyName Breitbart
228 schema:givenName Mya
229 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021303536.04
230 rdf:type schema:Person
231 sg:person.01021612334.04 schema:affiliation grid-institutes:grid.187073.a
232 schema:familyName Olson
233 schema:givenName Robert
234 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021612334.04
235 rdf:type schema:Person
236 sg:person.01040724241.02 schema:affiliation grid-institutes:grid.1014.4
237 schema:familyName Dinsdale
238 schema:givenName Elizabeth A.
239 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01040724241.02
240 rdf:type schema:Person
241 sg:person.01044565341.40 schema:affiliation grid-institutes:grid.170693.a
242 schema:familyName McDaniel
243 schema:givenName Lauren
244 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044565341.40
245 rdf:type schema:Person
246 sg:person.01062533764.12 schema:affiliation grid-institutes:None
247 schema:familyName Brulc
248 schema:givenName Jennifer M.
249 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01062533764.12
250 rdf:type schema:Person
251 sg:person.01070216007.87 schema:affiliation grid-institutes:grid.263081.e
252 schema:familyName Angly
253 schema:givenName Florent
254 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070216007.87
255 rdf:type schema:Person
256 sg:person.01136331207.33 schema:affiliation grid-institutes:grid.187073.a
257 schema:familyName Edwards
258 schema:givenName Robert A.
259 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136331207.33
260 rdf:type schema:Person
261 sg:person.01140156265.31 schema:affiliation grid-institutes:grid.35403.31
262 schema:familyName White
263 schema:givenName Bryan A.
264 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140156265.31
265 rdf:type schema:Person
266 sg:person.01147435060.08 schema:affiliation grid-institutes:grid.133342.4
267 schema:familyName Swan
268 schema:givenName Brandon K.
269 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01147435060.08
270 rdf:type schema:Person
271 sg:person.01213406210.22 schema:affiliation grid-institutes:grid.469946.0
272 schema:familyName Nelson
273 schema:givenName Karen E.
274 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01213406210.22
275 rdf:type schema:Person
276 sg:person.01215610154.59 schema:affiliation grid-institutes:grid.213876.9
277 schema:familyName Moran
278 schema:givenName Mary Ann
279 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215610154.59
280 rdf:type schema:Person
281 sg:person.01227127141.38 schema:affiliation grid-institutes:grid.418377.e
282 schema:familyName Nilsson
283 schema:givenName Christina
284 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227127141.38
285 rdf:type schema:Person
286 sg:person.01313105165.66 schema:affiliation grid-institutes:None
287 schema:familyName Li
288 schema:givenName Linlin
289 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01313105165.66
290 rdf:type schema:Person
291 sg:person.013335137357.86 schema:affiliation grid-institutes:grid.418377.e
292 schema:familyName Ruan
293 schema:givenName Yijun
294 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013335137357.86
295 rdf:type schema:Person
296 sg:person.01336527215.04 schema:affiliation grid-institutes:grid.5399.6
297 schema:familyName Desnues
298 schema:givenName Christelle
299 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01336527215.04
300 rdf:type schema:Person
301 sg:person.01351411217.16 schema:affiliation grid-institutes:None
302 schema:familyName Thurber
303 schema:givenName Rebecca Vega
304 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01351411217.16
305 rdf:type schema:Person
306 sg:person.01362257306.84 schema:affiliation grid-institutes:None
307 schema:familyName Furlan
308 schema:givenName Mike
309 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01362257306.84
310 rdf:type schema:Person
311 sg:person.014422704722.99 schema:affiliation grid-institutes:grid.170693.a
312 schema:familyName Paul
313 schema:givenName John
314 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014422704722.99
315 rdf:type schema:Person
316 sg:person.0606340210.26 schema:affiliation grid-institutes:None
317 schema:familyName Rohwer
318 schema:givenName Forest
319 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0606340210.26
320 rdf:type schema:Person
321 sg:person.0616303347.04 schema:affiliation grid-institutes:grid.133342.4
322 schema:familyName Valentine
323 schema:givenName David L.
324 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616303347.04
325 rdf:type schema:Person
326 sg:person.0617751441.06 schema:affiliation grid-institutes:grid.263081.e
327 schema:familyName Brito
328 schema:givenName Beltran Rodriguez
329 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0617751441.06
330 rdf:type schema:Person
331 sg:person.0636653206.93 schema:affiliation grid-institutes:None
332 schema:familyName Haynes
333 schema:givenName Matthew
334 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0636653206.93
335 rdf:type schema:Person
336 sg:person.0661532307.68 schema:affiliation grid-institutes:None
337 schema:familyName Wegley
338 schema:givenName Linda
339 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661532307.68
340 rdf:type schema:Person
341 sg:person.0707416220.12 schema:affiliation grid-institutes:grid.187073.a
342 schema:familyName Stevens
343 schema:givenName Rick
344 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0707416220.12
345 rdf:type schema:Person
346 sg:pub.10.1038/424741a schema:sameAs https://app.dimensions.ai/details/publication/pub.1031785841
347 https://doi.org/10.1038/424741a
348 rdf:type schema:CreativeWork
349 sg:pub.10.1038/4441022a schema:sameAs https://app.dimensions.ai/details/publication/pub.1018798093
350 https://doi.org/10.1038/4441022a
351 rdf:type schema:CreativeWork
352 sg:pub.10.1038/nature03959 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021574562
353 https://doi.org/10.1038/nature03959
354 rdf:type schema:CreativeWork
355 sg:pub.10.1038/nature04435 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000290333
356 https://doi.org/10.1038/nature04435
357 rdf:type schema:CreativeWork
358 sg:pub.10.1038/nrg1709 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017719492
359 https://doi.org/10.1038/nrg1709
360 rdf:type schema:CreativeWork
361 sg:pub.10.1038/nrm1524 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017946773
362 https://doi.org/10.1038/nrm1524
363 rdf:type schema:CreativeWork
364 sg:pub.10.1038/nrmicro1643 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003287226
365 https://doi.org/10.1038/nrmicro1643
366 rdf:type schema:CreativeWork
367 sg:pub.10.1186/1471-2105-9-386 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006083026
368 https://doi.org/10.1186/1471-2105-9-386
369 rdf:type schema:CreativeWork
370 sg:pub.10.1186/1471-2164-7-57 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020041008
371 https://doi.org/10.1186/1471-2164-7-57
372 rdf:type schema:CreativeWork
373 grid-institutes:None schema:alternateName Center for Microbial Sciences,
374 Department of Animal Sciences, and
375 Department of Biology,
376 schema:name Center for Microbial Sciences,
377 Department of Animal Sciences, and
378 Department of Biology,
379 rdf:type schema:Organization
380 grid-institutes:grid.1014.4 schema:alternateName School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia
381 schema:name Department of Biology,
382 School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia
383 rdf:type schema:Organization
384 grid-institutes:grid.133342.4 schema:alternateName Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA
385 schema:name Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA
386 rdf:type schema:Organization
387 grid-institutes:grid.170693.a schema:alternateName University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA
388 schema:name University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA
389 rdf:type schema:Organization
390 grid-institutes:grid.187073.a schema:alternateName Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
391 schema:name Center for Microbial Sciences,
392 Department of Biology,
393 Department of Computer Sciences, and
394 Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
395 rdf:type schema:Organization
396 grid-institutes:grid.213876.9 schema:alternateName Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA
397 schema:name Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA
398 rdf:type schema:Organization
399 grid-institutes:grid.263081.e schema:alternateName Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA
400 schema:name Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA
401 Department of Biology,
402 rdf:type schema:Organization
403 grid-institutes:grid.35403.31 schema:alternateName The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA
404 schema:name Department of Animal Sciences, and
405 The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA
406 rdf:type schema:Organization
407 grid-institutes:grid.418377.e schema:alternateName Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore
408 schema:name Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore
409 rdf:type schema:Organization
410 grid-institutes:grid.469946.0 schema:alternateName The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
411 schema:name The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
412 rdf:type schema:Organization
413 grid-institutes:grid.5399.6 schema:alternateName Present address: Unité des Rickettsies, CNRS-UMR 6020, Faculté de médecine, 13385 Marseille, France.
414 schema:name Department of Biology,
415 Present address: Unité des Rickettsies, CNRS-UMR 6020, Faculté de médecine, 13385 Marseille, France.
416 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...