Functional metagenomic profiling of nine biomes View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2008-03-12

AUTHORS

Elizabeth A. Dinsdale, Robert A. Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M. Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren McDaniel, Mary Ann Moran, Karen E. Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran Rodriguez Brito, Yijun Ruan, Brandon K. Swan, Rick Stevens, David L. Valentine, Rebecca Vega Thurber, Linda Wegley, Bryan A. White, Forest Rohwer

ABSTRACT

Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts. More... »

PAGES

629-632

Journal

TITLE

Nature

ISSUE

7187

VOLUME

452

Clinical Trials linked to this publication

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nature06810

DOI

http://dx.doi.org/10.1038/nature06810

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1047805213

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/18337718


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0605", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Animals", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Anthozoa", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Archaea", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Bacteria", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Chemotaxis", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Computational Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Culicidae", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Ecosystem", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Fishes", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Fresh Water", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Gene Expression Profiling", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Archaeal", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Viral", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genomics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Seawater", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Viruses", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia", 
          "id": "http://www.grid.ac/institutes/grid.1014.4", 
          "name": [
            "Department of Biology,", 
            "School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Dinsdale", 
        "givenName": "Elizabeth A.", 
        "id": "sg:person.01040724241.02", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01040724241.02"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Department of Biology,", 
            "Center for Microbial Sciences,", 
            "Department of Computer Sciences, and", 
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Edwards", 
        "givenName": "Robert A.", 
        "id": "sg:person.01136331207.33", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136331207.33"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hall", 
        "givenName": "Dana", 
        "id": "sg:person.01004505617.97", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01004505617.97"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA", 
          "id": "http://www.grid.ac/institutes/grid.263081.e", 
          "name": [
            "Department of Biology,", 
            "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Angly", 
        "givenName": "Florent", 
        "id": "sg:person.01070216007.87", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070216007.87"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Breitbart", 
        "givenName": "Mya", 
        "id": "sg:person.01021303536.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021303536.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Animal Sciences, and", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Animal Sciences, and"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brulc", 
        "givenName": "Jennifer M.", 
        "id": "sg:person.01062533764.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01062533764.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Furlan", 
        "givenName": "Mike", 
        "id": "sg:person.01362257306.84", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01362257306.84"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Present address: Unit\u00e9 des Rickettsies, CNRS-UMR 6020, Facult\u00e9 de m\u00e9decine, 13385 Marseille, France.", 
          "id": "http://www.grid.ac/institutes/grid.5399.6", 
          "name": [
            "Department of Biology,", 
            "Present address: Unit\u00e9 des Rickettsies, CNRS-UMR 6020, Facult\u00e9 de m\u00e9decine, 13385 Marseille, France."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Desnues", 
        "givenName": "Christelle", 
        "id": "sg:person.01336527215.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01336527215.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Haynes", 
        "givenName": "Matthew", 
        "id": "sg:person.0636653206.93", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0636653206.93"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li", 
        "givenName": "Linlin", 
        "id": "sg:person.01313105165.66", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01313105165.66"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McDaniel", 
        "givenName": "Lauren", 
        "id": "sg:person.01044565341.40", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044565341.40"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA", 
          "id": "http://www.grid.ac/institutes/grid.213876.9", 
          "name": [
            "Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Moran", 
        "givenName": "Mary Ann", 
        "id": "sg:person.01215610154.59", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215610154.59"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA", 
          "id": "http://www.grid.ac/institutes/grid.469946.0", 
          "name": [
            "The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nelson", 
        "givenName": "Karen E.", 
        "id": "sg:person.01213406210.22", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01213406210.22"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore", 
          "id": "http://www.grid.ac/institutes/grid.418377.e", 
          "name": [
            "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nilsson", 
        "givenName": "Christina", 
        "id": "sg:person.01227127141.38", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227127141.38"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Olson", 
        "givenName": "Robert", 
        "id": "sg:person.01021612334.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021612334.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA", 
          "id": "http://www.grid.ac/institutes/grid.170693.a", 
          "name": [
            "University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Paul", 
        "givenName": "John", 
        "id": "sg:person.014422704722.99", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014422704722.99"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA", 
          "id": "http://www.grid.ac/institutes/grid.263081.e", 
          "name": [
            "Department of Biology,", 
            "Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brito", 
        "givenName": "Beltran Rodriguez", 
        "id": "sg:person.0617751441.06", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0617751441.06"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore", 
          "id": "http://www.grid.ac/institutes/grid.418377.e", 
          "name": [
            "Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ruan", 
        "givenName": "Yijun", 
        "id": "sg:person.013335137357.86", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013335137357.86"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA", 
          "id": "http://www.grid.ac/institutes/grid.133342.4", 
          "name": [
            "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Swan", 
        "givenName": "Brandon K.", 
        "id": "sg:person.01147435060.08", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01147435060.08"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA", 
          "id": "http://www.grid.ac/institutes/grid.187073.a", 
          "name": [
            "Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stevens", 
        "givenName": "Rick", 
        "id": "sg:person.0707416220.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0707416220.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA", 
          "id": "http://www.grid.ac/institutes/grid.133342.4", 
          "name": [
            "Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Valentine", 
        "givenName": "David L.", 
        "id": "sg:person.0616303347.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616303347.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Thurber", 
        "givenName": "Rebecca Vega", 
        "id": "sg:person.01351411217.16", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01351411217.16"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wegley", 
        "givenName": "Linda", 
        "id": "sg:person.0661532307.68", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661532307.68"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA", 
          "id": "http://www.grid.ac/institutes/grid.35403.31", 
          "name": [
            "Department of Animal Sciences, and", 
            "The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "White", 
        "givenName": "Bryan A.", 
        "id": "sg:person.01140156265.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140156265.31"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Center for Microbial Sciences,", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Department of Biology,", 
            "Center for Microbial Sciences,"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rohwer", 
        "givenName": "Forest", 
        "id": "sg:person.0606340210.26", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0606340210.26"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1038/nature04435", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000290333", 
          "https://doi.org/10.1038/nature04435"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrg1709", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017719492", 
          "https://doi.org/10.1038/nrg1709"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/4441022a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018798093", 
          "https://doi.org/10.1038/4441022a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-9-386", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006083026", 
          "https://doi.org/10.1186/1471-2105-9-386"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/424741a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031785841", 
          "https://doi.org/10.1038/424741a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-7-57", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020041008", 
          "https://doi.org/10.1186/1471-2164-7-57"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03959", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021574562", 
          "https://doi.org/10.1038/nature03959"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrmicro1643", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003287226", 
          "https://doi.org/10.1038/nrmicro1643"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrm1524", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017946773", 
          "https://doi.org/10.1038/nrm1524"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2008-03-12", 
    "datePublishedReg": "2008-03-12", 
    "description": "Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts.", 
    "genre": "article", 
    "id": "sg:pub.10.1038/nature06810", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1018957", 
        "issn": [
          "0028-0836", 
          "1476-4687"
        ], 
        "name": "Nature", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "7187", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "452"
      }
    ], 
    "keywords": [
      "metabolic capabilities", 
      "comparative metagenomic study", 
      "functional metagenomic profiling", 
      "different ecosystem types", 
      "microbial genomes", 
      "microbial hosts", 
      "gene pool", 
      "coral reefs", 
      "metagenomic studies", 
      "microbial fingerprints", 
      "metagenomic profiling", 
      "ecosystem types", 
      "metabolic traits", 
      "surprising array", 
      "genome", 
      "reefs", 
      "genes", 
      "biome", 
      "distinct types", 
      "traits", 
      "ecosystems", 
      "microbiome", 
      "profiling", 
      "host", 
      "sequence", 
      "pool", 
      "virus", 
      "River", 
      "types", 
      "fingerprints", 
      "environment", 
      "analysis", 
      "array", 
      "study", 
      "capability", 
      "mine", 
      "deep mines", 
      "roster"
    ], 
    "name": "Functional metagenomic profiling of nine biomes", 
    "pagination": "629-632", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1047805213"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/nature06810"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "18337718"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/nature06810", 
      "https://app.dimensions.ai/details/publication/pub.1047805213"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-10-01T06:35", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20221001/entities/gbq_results/article/article_476.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1038/nature06810"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/nature06810'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/nature06810'


 

This table displays all metadata directly associated to this object as RDF triples.

416 TRIPLES      21 PREDICATES      90 URIs      73 LITERALS      25 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/nature06810 schema:about N0e2cc46824df40feadb386d1474eba08
2 N35243b152d3b4401b1dbba9f29bc92d0
3 N40f32de8f2934e79ae6088bb2c3e4f2b
4 N5c4763cde74645dc9a51be81e43db498
5 N5eba32d92f4c471c96c59279e0e7125c
6 N6c12cfa0e7ac4d61a27d14528713191b
7 N70e1f62fbeb14550a38efc7340d2d3de
8 N7777877abb0242038f59c15a7d01bdcd
9 N7e356f1793de4246b36f3c4c7b40be62
10 N8f5d979736924ecf85fdbb634f4ec826
11 N90d9f393a1ac42d287d9862005e7d86e
12 Nb08c623678b9458bbafb17edad112142
13 Nc3ccad37c54641569d309eceb4db7e2f
14 Nc56770b8b53943e5b0da7ff4b864c30d
15 Nca633563618e48a3afa5ca6aaf62cf57
16 Nd5e3e347c8004b83a9a87d29975d8a79
17 Nf5cf94c80afb49b6972ebdef0d628b24
18 Nf987e7697e1d44a28bd824a25b3ff9cc
19 anzsrc-for:06
20 anzsrc-for:0605
21 schema:author N674efcdfbde941a7a8dc8197b923e179
22 schema:citation sg:pub.10.1038/424741a
23 sg:pub.10.1038/4441022a
24 sg:pub.10.1038/nature03959
25 sg:pub.10.1038/nature04435
26 sg:pub.10.1038/nrg1709
27 sg:pub.10.1038/nrm1524
28 sg:pub.10.1038/nrmicro1643
29 sg:pub.10.1186/1471-2105-9-386
30 sg:pub.10.1186/1471-2164-7-57
31 schema:datePublished 2008-03-12
32 schema:datePublishedReg 2008-03-12
33 schema:description Microbial profilesNearly 15 million sequences were used in a comparative metagenomic study of 45 microbiomes and 42 viriomes (the latter dominated by bacteriophage) from nine distinct types of ecosystem, varying from coral reefs and rivers to deep mines. While the core metabolic traits were represented in microbial genomes from all environments, a characteristic microbial fingerprint was found for each of the nine different ecosystem types based on a roster of metabolic capabilities. The analysis also reveals a surprising array of viral metabolic capabilities, suggesting that viruses may serve as a gene pool for sharing genes among their microbial hosts.
34 schema:genre article
35 schema:isAccessibleForFree false
36 schema:isPartOf N0845dd20089349dfa97958bc05ea8742
37 Nc4673167b3474c67980eb219542bf97c
38 sg:journal.1018957
39 schema:keywords River
40 analysis
41 array
42 biome
43 capability
44 comparative metagenomic study
45 coral reefs
46 deep mines
47 different ecosystem types
48 distinct types
49 ecosystem types
50 ecosystems
51 environment
52 fingerprints
53 functional metagenomic profiling
54 gene pool
55 genes
56 genome
57 host
58 metabolic capabilities
59 metabolic traits
60 metagenomic profiling
61 metagenomic studies
62 microbial fingerprints
63 microbial genomes
64 microbial hosts
65 microbiome
66 mine
67 pool
68 profiling
69 reefs
70 roster
71 sequence
72 study
73 surprising array
74 traits
75 types
76 virus
77 schema:name Functional metagenomic profiling of nine biomes
78 schema:pagination 629-632
79 schema:productId N6d82f4ae6de34f469d3c552be3b980b8
80 N708d5a8d462b4bf7bdb7187f23d07cf3
81 Naa606dadede94ca794949f65031a9ada
82 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047805213
83 https://doi.org/10.1038/nature06810
84 schema:sdDatePublished 2022-10-01T06:35
85 schema:sdLicense https://scigraph.springernature.com/explorer/license/
86 schema:sdPublisher Nd3ac7f3051334b36aa3c0bd864525e35
87 schema:url https://doi.org/10.1038/nature06810
88 sgo:license sg:explorer/license/
89 sgo:sdDataset articles
90 rdf:type schema:ScholarlyArticle
91 N0799fdec617347cbab2533235e0fd452 rdf:first sg:person.0661532307.68
92 rdf:rest Na32039ab19b945bb8c4a1d9ea72d0426
93 N0845dd20089349dfa97958bc05ea8742 schema:volumeNumber 452
94 rdf:type schema:PublicationVolume
95 N0e2cc46824df40feadb386d1474eba08 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
96 schema:name Gene Expression Profiling
97 rdf:type schema:DefinedTerm
98 N1b079f48e87f44aea840bea6b24f7b1e rdf:first sg:person.0606340210.26
99 rdf:rest rdf:nil
100 N35243b152d3b4401b1dbba9f29bc92d0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
101 schema:name Chemotaxis
102 rdf:type schema:DefinedTerm
103 N38132fc2fa224657aaa038e2d971fd25 rdf:first sg:person.01004505617.97
104 rdf:rest N599388d4c849477cb473784f43d20254
105 N3a8c5aef53a64c6eaf137849f9fc16ec rdf:first sg:person.014422704722.99
106 rdf:rest N6e3a34850af3404a84f6aeee59869bb8
107 N40f32de8f2934e79ae6088bb2c3e4f2b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
108 schema:name Anthozoa
109 rdf:type schema:DefinedTerm
110 N42e3f38a56ab4d21b51d4ee603dddd5c rdf:first sg:person.01227127141.38
111 rdf:rest Nd6ada16d57084ad98fbf8cad788dd355
112 N435bba529d3045a8935dc5e66d787209 rdf:first sg:person.01213406210.22
113 rdf:rest N42e3f38a56ab4d21b51d4ee603dddd5c
114 N4d9cfd291f794ec783a42e906f3823d9 rdf:first sg:person.013335137357.86
115 rdf:rest Nc3364f0af51d44818c9b9b2875e0599b
116 N599388d4c849477cb473784f43d20254 rdf:first sg:person.01070216007.87
117 rdf:rest Nb23c038e33fe4b2892ea5acaea395efa
118 N5c4763cde74645dc9a51be81e43db498 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
119 schema:name Bacteria
120 rdf:type schema:DefinedTerm
121 N5eba32d92f4c471c96c59279e0e7125c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
122 schema:name Fresh Water
123 rdf:type schema:DefinedTerm
124 N674efcdfbde941a7a8dc8197b923e179 rdf:first sg:person.01040724241.02
125 rdf:rest Nd31cff7df5084085b97a593492c90576
126 N6c12cfa0e7ac4d61a27d14528713191b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
127 schema:name Microbiology
128 rdf:type schema:DefinedTerm
129 N6d82f4ae6de34f469d3c552be3b980b8 schema:name dimensions_id
130 schema:value pub.1047805213
131 rdf:type schema:PropertyValue
132 N6e3a34850af3404a84f6aeee59869bb8 rdf:first sg:person.0617751441.06
133 rdf:rest N4d9cfd291f794ec783a42e906f3823d9
134 N708d5a8d462b4bf7bdb7187f23d07cf3 schema:name doi
135 schema:value 10.1038/nature06810
136 rdf:type schema:PropertyValue
137 N70e1f62fbeb14550a38efc7340d2d3de schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
138 schema:name Fishes
139 rdf:type schema:DefinedTerm
140 N74440f50d7e8496998c2c505c5c6cd81 rdf:first sg:person.01062533764.12
141 rdf:rest N863a22ac759446dd8b34a394e53d8655
142 N7777877abb0242038f59c15a7d01bdcd schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
143 schema:name Animals
144 rdf:type schema:DefinedTerm
145 N7e10d93ec6214e7992795747afa75121 rdf:first sg:person.01313105165.66
146 rdf:rest Na2c89bdfa5134c95b5e3a25811e18285
147 N7e356f1793de4246b36f3c4c7b40be62 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
148 schema:name Archaea
149 rdf:type schema:DefinedTerm
150 N7ec0d3055441461cab77e1b15240a13d rdf:first sg:person.01351411217.16
151 rdf:rest N0799fdec617347cbab2533235e0fd452
152 N863a22ac759446dd8b34a394e53d8655 rdf:first sg:person.01362257306.84
153 rdf:rest Nb2be00c044be4158a84d6e3a42229c1b
154 N8f5d979736924ecf85fdbb634f4ec826 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
155 schema:name Viruses
156 rdf:type schema:DefinedTerm
157 N90d9f393a1ac42d287d9862005e7d86e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
158 schema:name Culicidae
159 rdf:type schema:DefinedTerm
160 N97e6796476a84eba81575795872dc9e3 rdf:first sg:person.0707416220.12
161 rdf:rest Nf31cd900b1f849748010478704da84f5
162 Na2c89bdfa5134c95b5e3a25811e18285 rdf:first sg:person.01044565341.40
163 rdf:rest Nc6e64fa7fd514ec8b5e857e6b117bb86
164 Na32039ab19b945bb8c4a1d9ea72d0426 rdf:first sg:person.01140156265.31
165 rdf:rest N1b079f48e87f44aea840bea6b24f7b1e
166 Na4d7d3825d6b4b9b811b727fc39937f8 rdf:first sg:person.0636653206.93
167 rdf:rest N7e10d93ec6214e7992795747afa75121
168 Naa606dadede94ca794949f65031a9ada schema:name pubmed_id
169 schema:value 18337718
170 rdf:type schema:PropertyValue
171 Nb08c623678b9458bbafb17edad112142 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
172 schema:name Seawater
173 rdf:type schema:DefinedTerm
174 Nb23c038e33fe4b2892ea5acaea395efa rdf:first sg:person.01021303536.04
175 rdf:rest N74440f50d7e8496998c2c505c5c6cd81
176 Nb2be00c044be4158a84d6e3a42229c1b rdf:first sg:person.01336527215.04
177 rdf:rest Na4d7d3825d6b4b9b811b727fc39937f8
178 Nc3364f0af51d44818c9b9b2875e0599b rdf:first sg:person.01147435060.08
179 rdf:rest N97e6796476a84eba81575795872dc9e3
180 Nc3ccad37c54641569d309eceb4db7e2f schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
181 schema:name Genome, Archaeal
182 rdf:type schema:DefinedTerm
183 Nc4673167b3474c67980eb219542bf97c schema:issueNumber 7187
184 rdf:type schema:PublicationIssue
185 Nc56770b8b53943e5b0da7ff4b864c30d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
186 schema:name Genomics
187 rdf:type schema:DefinedTerm
188 Nc6e64fa7fd514ec8b5e857e6b117bb86 rdf:first sg:person.01215610154.59
189 rdf:rest N435bba529d3045a8935dc5e66d787209
190 Nca633563618e48a3afa5ca6aaf62cf57 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
191 schema:name Ecosystem
192 rdf:type schema:DefinedTerm
193 Nd31cff7df5084085b97a593492c90576 rdf:first sg:person.01136331207.33
194 rdf:rest N38132fc2fa224657aaa038e2d971fd25
195 Nd3ac7f3051334b36aa3c0bd864525e35 schema:name Springer Nature - SN SciGraph project
196 rdf:type schema:Organization
197 Nd5e3e347c8004b83a9a87d29975d8a79 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
198 schema:name Genome, Bacterial
199 rdf:type schema:DefinedTerm
200 Nd6ada16d57084ad98fbf8cad788dd355 rdf:first sg:person.01021612334.04
201 rdf:rest N3a8c5aef53a64c6eaf137849f9fc16ec
202 Nf31cd900b1f849748010478704da84f5 rdf:first sg:person.0616303347.04
203 rdf:rest N7ec0d3055441461cab77e1b15240a13d
204 Nf5cf94c80afb49b6972ebdef0d628b24 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
205 schema:name Computational Biology
206 rdf:type schema:DefinedTerm
207 Nf987e7697e1d44a28bd824a25b3ff9cc schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
208 schema:name Genome, Viral
209 rdf:type schema:DefinedTerm
210 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
211 schema:name Biological Sciences
212 rdf:type schema:DefinedTerm
213 anzsrc-for:0605 schema:inDefinedTermSet anzsrc-for:
214 schema:name Microbiology
215 rdf:type schema:DefinedTerm
216 sg:journal.1018957 schema:issn 0028-0836
217 1476-4687
218 schema:name Nature
219 schema:publisher Springer Nature
220 rdf:type schema:Periodical
221 sg:person.01004505617.97 schema:affiliation grid-institutes:None
222 schema:familyName Hall
223 schema:givenName Dana
224 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01004505617.97
225 rdf:type schema:Person
226 sg:person.01021303536.04 schema:affiliation grid-institutes:grid.170693.a
227 schema:familyName Breitbart
228 schema:givenName Mya
229 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021303536.04
230 rdf:type schema:Person
231 sg:person.01021612334.04 schema:affiliation grid-institutes:grid.187073.a
232 schema:familyName Olson
233 schema:givenName Robert
234 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021612334.04
235 rdf:type schema:Person
236 sg:person.01040724241.02 schema:affiliation grid-institutes:grid.1014.4
237 schema:familyName Dinsdale
238 schema:givenName Elizabeth A.
239 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01040724241.02
240 rdf:type schema:Person
241 sg:person.01044565341.40 schema:affiliation grid-institutes:grid.170693.a
242 schema:familyName McDaniel
243 schema:givenName Lauren
244 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044565341.40
245 rdf:type schema:Person
246 sg:person.01062533764.12 schema:affiliation grid-institutes:None
247 schema:familyName Brulc
248 schema:givenName Jennifer M.
249 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01062533764.12
250 rdf:type schema:Person
251 sg:person.01070216007.87 schema:affiliation grid-institutes:grid.263081.e
252 schema:familyName Angly
253 schema:givenName Florent
254 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070216007.87
255 rdf:type schema:Person
256 sg:person.01136331207.33 schema:affiliation grid-institutes:grid.187073.a
257 schema:familyName Edwards
258 schema:givenName Robert A.
259 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136331207.33
260 rdf:type schema:Person
261 sg:person.01140156265.31 schema:affiliation grid-institutes:grid.35403.31
262 schema:familyName White
263 schema:givenName Bryan A.
264 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140156265.31
265 rdf:type schema:Person
266 sg:person.01147435060.08 schema:affiliation grid-institutes:grid.133342.4
267 schema:familyName Swan
268 schema:givenName Brandon K.
269 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01147435060.08
270 rdf:type schema:Person
271 sg:person.01213406210.22 schema:affiliation grid-institutes:grid.469946.0
272 schema:familyName Nelson
273 schema:givenName Karen E.
274 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01213406210.22
275 rdf:type schema:Person
276 sg:person.01215610154.59 schema:affiliation grid-institutes:grid.213876.9
277 schema:familyName Moran
278 schema:givenName Mary Ann
279 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215610154.59
280 rdf:type schema:Person
281 sg:person.01227127141.38 schema:affiliation grid-institutes:grid.418377.e
282 schema:familyName Nilsson
283 schema:givenName Christina
284 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227127141.38
285 rdf:type schema:Person
286 sg:person.01313105165.66 schema:affiliation grid-institutes:None
287 schema:familyName Li
288 schema:givenName Linlin
289 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01313105165.66
290 rdf:type schema:Person
291 sg:person.013335137357.86 schema:affiliation grid-institutes:grid.418377.e
292 schema:familyName Ruan
293 schema:givenName Yijun
294 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013335137357.86
295 rdf:type schema:Person
296 sg:person.01336527215.04 schema:affiliation grid-institutes:grid.5399.6
297 schema:familyName Desnues
298 schema:givenName Christelle
299 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01336527215.04
300 rdf:type schema:Person
301 sg:person.01351411217.16 schema:affiliation grid-institutes:None
302 schema:familyName Thurber
303 schema:givenName Rebecca Vega
304 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01351411217.16
305 rdf:type schema:Person
306 sg:person.01362257306.84 schema:affiliation grid-institutes:None
307 schema:familyName Furlan
308 schema:givenName Mike
309 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01362257306.84
310 rdf:type schema:Person
311 sg:person.014422704722.99 schema:affiliation grid-institutes:grid.170693.a
312 schema:familyName Paul
313 schema:givenName John
314 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014422704722.99
315 rdf:type schema:Person
316 sg:person.0606340210.26 schema:affiliation grid-institutes:None
317 schema:familyName Rohwer
318 schema:givenName Forest
319 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0606340210.26
320 rdf:type schema:Person
321 sg:person.0616303347.04 schema:affiliation grid-institutes:grid.133342.4
322 schema:familyName Valentine
323 schema:givenName David L.
324 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616303347.04
325 rdf:type schema:Person
326 sg:person.0617751441.06 schema:affiliation grid-institutes:grid.263081.e
327 schema:familyName Brito
328 schema:givenName Beltran Rodriguez
329 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0617751441.06
330 rdf:type schema:Person
331 sg:person.0636653206.93 schema:affiliation grid-institutes:None
332 schema:familyName Haynes
333 schema:givenName Matthew
334 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0636653206.93
335 rdf:type schema:Person
336 sg:person.0661532307.68 schema:affiliation grid-institutes:None
337 schema:familyName Wegley
338 schema:givenName Linda
339 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661532307.68
340 rdf:type schema:Person
341 sg:person.0707416220.12 schema:affiliation grid-institutes:grid.187073.a
342 schema:familyName Stevens
343 schema:givenName Rick
344 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0707416220.12
345 rdf:type schema:Person
346 sg:pub.10.1038/424741a schema:sameAs https://app.dimensions.ai/details/publication/pub.1031785841
347 https://doi.org/10.1038/424741a
348 rdf:type schema:CreativeWork
349 sg:pub.10.1038/4441022a schema:sameAs https://app.dimensions.ai/details/publication/pub.1018798093
350 https://doi.org/10.1038/4441022a
351 rdf:type schema:CreativeWork
352 sg:pub.10.1038/nature03959 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021574562
353 https://doi.org/10.1038/nature03959
354 rdf:type schema:CreativeWork
355 sg:pub.10.1038/nature04435 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000290333
356 https://doi.org/10.1038/nature04435
357 rdf:type schema:CreativeWork
358 sg:pub.10.1038/nrg1709 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017719492
359 https://doi.org/10.1038/nrg1709
360 rdf:type schema:CreativeWork
361 sg:pub.10.1038/nrm1524 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017946773
362 https://doi.org/10.1038/nrm1524
363 rdf:type schema:CreativeWork
364 sg:pub.10.1038/nrmicro1643 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003287226
365 https://doi.org/10.1038/nrmicro1643
366 rdf:type schema:CreativeWork
367 sg:pub.10.1186/1471-2105-9-386 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006083026
368 https://doi.org/10.1186/1471-2105-9-386
369 rdf:type schema:CreativeWork
370 sg:pub.10.1186/1471-2164-7-57 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020041008
371 https://doi.org/10.1186/1471-2164-7-57
372 rdf:type schema:CreativeWork
373 grid-institutes:None schema:alternateName Center for Microbial Sciences,
374 Department of Animal Sciences, and
375 Department of Biology,
376 schema:name Center for Microbial Sciences,
377 Department of Animal Sciences, and
378 Department of Biology,
379 rdf:type schema:Organization
380 grid-institutes:grid.1014.4 schema:alternateName School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia
381 schema:name Department of Biology,
382 School of Biological Sciences, Flinders University, Adelaide, South Australia 5042, Australia
383 rdf:type schema:Organization
384 grid-institutes:grid.133342.4 schema:alternateName Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA
385 schema:name Department of Earth Science, University of California Santa Barbara, Santa Barbara, California 93106, USA
386 rdf:type schema:Organization
387 grid-institutes:grid.170693.a schema:alternateName University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA
388 schema:name University of South Florida, College of Marine Science, 140 7th Avenue South, St Petersburg, Florida 33701, USA
389 rdf:type schema:Organization
390 grid-institutes:grid.187073.a schema:alternateName Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
391 schema:name Center for Microbial Sciences,
392 Department of Biology,
393 Department of Computer Sciences, and
394 Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
395 rdf:type schema:Organization
396 grid-institutes:grid.213876.9 schema:alternateName Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA
397 schema:name Department of Marine Sciences, University of Georgia, Athens, 30602 Georgia, USA
398 rdf:type schema:Organization
399 grid-institutes:grid.263081.e schema:alternateName Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA
400 schema:name Computational Science Research Centre, San Diego State University, San Diego, California 92182, USA
401 Department of Biology,
402 rdf:type schema:Organization
403 grid-institutes:grid.35403.31 schema:alternateName The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA
404 schema:name Department of Animal Sciences, and
405 The Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, USA
406 rdf:type schema:Organization
407 grid-institutes:grid.418377.e schema:alternateName Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore
408 schema:name Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672, Singapore
409 rdf:type schema:Organization
410 grid-institutes:grid.469946.0 schema:alternateName The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
411 schema:name The J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
412 rdf:type schema:Organization
413 grid-institutes:grid.5399.6 schema:alternateName Present address: Unité des Rickettsies, CNRS-UMR 6020, Faculté de médecine, 13385 Marseille, France.
414 schema:name Department of Biology,
415 Present address: Unité des Rickettsies, CNRS-UMR 6020, Faculté de médecine, 13385 Marseille, France.
416 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...