Amphibian skin may select for rare environmental microbes View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2014-11

AUTHORS

Jenifer B Walke, Matthew H Becker, Stephen C Loftus, Leanna L House, Guy Cormier, Roderick V Jensen, Lisa K Belden

ABSTRACT

Host-microbe symbioses rely on the successful transmission or acquisition of symbionts in each new generation. Amphibians host a diverse cutaneous microbiota, and many of these symbionts appear to be mutualistic and may limit infection by the chytrid fungus, Batrachochytrium dendrobatidis, which has caused global amphibian population declines and extinctions in recent decades. Using bar-coded 454 pyrosequencing of the 16S rRNA gene, we addressed the question of symbiont transmission by examining variation in amphibian skin microbiota across species and sites and in direct relation to environmental microbes. Although acquisition of environmental microbes occurs in some host-symbiont systems, this has not been extensively examined in free-living vertebrate-microbe symbioses. Juvenile bullfrogs (Rana catesbeiana), adult red-spotted newts (Notophthalmus viridescens), pond water and pond substrate were sampled at a single pond to examine host-specificity and potential environmental transmission of microbiota. To assess population level variation in skin microbiota, adult newts from two additional sites were also sampled. Cohabiting bullfrogs and newts had distinct microbial communities, as did newts across the three sites. The microbial communities of amphibians and the environment were distinct; there was very little overlap in the amphibians' core microbes and the most abundant environmental microbes, and the relative abundances of OTUs that were shared by amphibians and the environment were inversely related. These results suggest that, in a host species-specific manner, amphibian skin may select for microbes that are generally in low abundance in the environment. More... »

PAGES

2207

References to SciGraph publications

  • 2006-12. An obesity-associated gut microbiome with increased capacity for energy harvest in NATURE
  • 2008-05. Antifungal skin bacteria, embryonic survival, and communal nesting in four-toed salamanders, Hemidactylium scutatum in OECOLOGIA
  • 2006-01. Population trends associated with skin peptide defenses against chytridiomycosis in Australian frogs in OECOLOGIA
  • 2013-07. Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes in THE ISME JOURNAL
  • 2008-02. Diversity of cutaneous bacteria with antifungal activity isolated from female four-toed salamanders in THE ISME JOURNAL
  • 2010-09. Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions in NATURE METHODS
  • 2010-03. A complex journey: transmission of microbial symbionts in NATURE REVIEWS MICROBIOLOGY
  • 2007-10-18. An ecological and evolutionary perspective on human–microbe mutualism and disease in NATURE
  • 2007-05. The role of microorganisms in coral health, disease and evolution in NATURE REVIEWS MICROBIOLOGY
  • 2011-01. The contribution of skin antimicrobial peptides to the system of innate immunity in anurans in CELL AND TISSUE RESEARCH
  • 1964-03. Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis in PSYCHOMETRIKA
  • 2009-07. Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus in THE ISME JOURNAL
  • 2008-10. Worlds within worlds: evolution of the vertebrate gut microbiota in NATURE REVIEWS MICROBIOLOGY
  • 2010-05. QIIME allows analysis of high-throughput community sequencing data in NATURE METHODS
  • 2012-03. Co-habiting amphibian species harbor unique skin bacterial communities in wild populations in THE ISME JOURNAL
  • 2013-01. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing in NATURE METHODS
  • 2006-03. Amphibian Pathogen Batrachochytrium dendrobatidis Is Inhibited by the Cutaneous Bacteria of Amphibian Species in ECOHEALTH
  • 2012-08. Synergistic Inhibition of the Lethal Fungal Pathogen Batrachochytrium dendrobatidis: The Combined Effect of Symbiotic Bacterial Metabolites and Antimicrobial Peptides of the Frog Rana muscosa in JOURNAL OF CHEMICAL ECOLOGY
  • 2011-02. UniFrac: an effective distance metric for microbial community comparison in THE ISME JOURNAL
  • 2011-08-03. Microbial Symbiont Transmission: Basic Principles and Dark Sides in BENEFICIAL MICROORGANISMS IN MULTICELLULAR LIFE FORMS
  • 2011-09. Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing in THE ISME JOURNAL
  • 2011-10. Evidence for a core gut microbiota in the zebrafish in THE ISME JOURNAL
  • 2007-06. Spread of Chytridiomycosis Has Caused the Rapid Global Decline and Extinction of Frogs in ECOHEALTH
  • 2007-08. How rhizobial symbionts invade plants: the Sinorhizobium–Medicago model in NATURE REVIEWS MICROBIOLOGY
  • 2004-08. The winnowing: establishing the squid–vibrio symbiosis in NATURE REVIEWS MICROBIOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ismej.2014.77

    DOI

    http://dx.doi.org/10.1038/ismej.2014.77

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1039437053

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/24858782


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