Global biogeography of highly diverse protistan communities in soil View Full Text


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Article Info

DATE

2012-12-13

AUTHORS

Scott T Bates, Jose C Clemente, Gilberto E Flores, William Anthony Walters, Laura Wegener Parfrey, Rob Knight, Noah Fierer

ABSTRACT

Protists are ubiquitous members of soil microbial communities, but the structure of these communities, and the factors that influence their diversity, are poorly understood. We used barcoded pyrosequencing to survey comprehensively the diversity of soil protists from 40 sites across a broad geographic range that represent a variety of biome types, from tropical forests to deserts. In addition to taxa known to be dominant in soil, including Cercozoa and Ciliophora, we found high relative abundances of groups such as Apicomplexa and Dinophyceae that have not previously been recognized as being important components of soil microbial communities. Soil protistan communities were highly diverse, approaching the extreme diversity of their bacterial counterparts across the same sites. Like bacterial taxa, protistan taxa were not globally distributed, and the composition of these communities diverged considerably across large geographic distances. However, soil protistan and bacterial communities exhibit very different global-scale biogeographical patterns, with protistan communities strongly structured by climatic conditions that regulate annual soil moisture availability. More... »

PAGES

652-659

References to SciGraph publications

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  • 2011-12-01. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2004-12. Spatial scaling of microbial eukaryote diversity in NATURE
  • 2006-02. Microbial biogeography: putting microorganisms on the map in NATURE REVIEWS MICROBIOLOGY
  • 2008-11-13. Protists are microbes too: a perspective in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 1995. Interpreting soil ciliate biodiversity in THE SIGNIFICANCE AND REGULATION OF SOIL BIODIVERSITY
  • 2002-03. Significance of predation by protists in aquatic microbial food webs in ANTONIE VAN LEEUWENHOEK
  • 2010-11-18. Examining the global distribution of dominant archaeal populations in soil in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2001-02. Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton in NATURE
  • 2007-09-13. DNA evidence for global dispersal and probable endemicity of protozoa in BMC EVOLUTIONARY BIOLOGY
  • 2011-02-03. Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ismej.2012.147

    DOI

    http://dx.doi.org/10.1038/ismej.2012.147

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1048627331

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/23235291


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