Dominant and diet-responsive groups of bacteria within the human colonic microbiota View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2011-02

AUTHORS

Alan W Walker, Jennifer Ince, Sylvia H Duncan, Lucy M Webster, Grietje Holtrop, Xiaolei Ze, David Brown, Mark D Stares, Paul Scott, Aurore Bergerat, Petra Louis, Freda McIntosh, Alexandra M Johnstone, Gerald E Lobley, Julian Parkhill, Harry J Flint

ABSTRACT

The populations of dominant species within the human colonic microbiota can potentially be modified by dietary intake with consequences for health. Here we examined the influence of precisely controlled diets in 14 overweight men. Volunteers were provided successively with a control diet, diets high in resistant starch (RS) or non-starch polysaccharides (NSPs) and a reduced carbohydrate weight loss (WL) diet, over 10 weeks. Analysis of 16S rRNA sequences in stool samples of six volunteers detected 320 phylotypes (defined at >98% identity) of which 26, including 19 cultured species, each accounted for >1% of sequences. Although samples clustered more strongly by individual than by diet, time courses obtained by targeted qPCR revealed that 'blooms' in specific bacterial groups occurred rapidly after a dietary change. These were rapidly reversed by the subsequent diet. Relatives of Ruminococcus bromii (R-ruminococci) increased in most volunteers on the RS diet, accounting for a mean of 17% of total bacteria compared with 3.8% on the NSP diet, whereas the uncultured Oscillibacter group increased on the RS and WL diets. Relatives of Eubacterium rectale increased on RS (to mean 10.1%) but decreased, along with Collinsella aerofaciens, on WL. Inter-individual variation was marked, however, with >60% of RS remaining unfermented in two volunteers on the RS diet, compared to <4% in the other 12 volunteers; these two individuals also showed low numbers of R-ruminococci (<1%). Dietary non-digestible carbohydrate can produce marked changes in the gut microbiota, but these depend on the initial composition of an individual's gut microbiota. More... »

PAGES

220

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/ismej.2010.118

DOI

http://dx.doi.org/10.1038/ismej.2010.118

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1046790587

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/20686513


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1111", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Nutrition and Dietetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/11", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Medical and Health Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Archaea", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Bacteria", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Biodiversity", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Colon", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Cross-Over Studies", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Diet", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Diet, Reducing", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Dietary Carbohydrates", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Dietary Proteins", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Feces", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Humans", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Male", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Metagenome", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Ribosomal, 16S", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Starch", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Wellcome Sanger Institute", 
          "id": "https://www.grid.ac/institutes/grid.10306.34", 
          "name": [
            "Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Walker", 
        "givenName": "Alan W", 
        "id": "sg:person.01335507476.10", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335507476.10"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ince", 
        "givenName": "Jennifer", 
        "id": "sg:person.0774445021.76", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0774445021.76"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Duncan", 
        "givenName": "Sylvia H", 
        "id": "sg:person.01206005646.02", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01206005646.02"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Webster", 
        "givenName": "Lucy M", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Biomathematics and Statistics Scotland", 
          "id": "https://www.grid.ac/institutes/grid.450566.4", 
          "name": [
            "Biomathematics and Statistics Scotland, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Holtrop", 
        "givenName": "Grietje", 
        "id": "sg:person.01013170777.32", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013170777.32"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ze", 
        "givenName": "Xiaolei", 
        "id": "sg:person.0614437151.98", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0614437151.98"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brown", 
        "givenName": "David", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Wellcome Sanger Institute", 
          "id": "https://www.grid.ac/institutes/grid.10306.34", 
          "name": [
            "Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stares", 
        "givenName": "Mark D", 
        "id": "sg:person.0667712766.39", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0667712766.39"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Wellcome Sanger Institute", 
          "id": "https://www.grid.ac/institutes/grid.10306.34", 
          "name": [
            "Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Scott", 
        "givenName": "Paul", 
        "id": "sg:person.01105527007.07", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01105527007.07"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Bergerat", 
        "givenName": "Aurore", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Louis", 
        "givenName": "Petra", 
        "id": "sg:person.0715265632.22", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0715265632.22"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McIntosh", 
        "givenName": "Freda", 
        "id": "sg:person.0714640405.30", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0714640405.30"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Johnstone", 
        "givenName": "Alexandra M", 
        "id": "sg:person.01030443474.25", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01030443474.25"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Lobley", 
        "givenName": "Gerald E", 
        "id": "sg:person.01250203741.85", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01250203741.85"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Wellcome Sanger Institute", 
          "id": "https://www.grid.ac/institutes/grid.10306.34", 
          "name": [
            "Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Parkhill", 
        "givenName": "Julian", 
        "id": "sg:person.01273656103.87", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01273656103.87"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Flint", 
        "givenName": "Harry J", 
        "id": "sg:person.01021722152.69", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021722152.69"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.2337/db06-1491", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001015195"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2008.01815.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006139925"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6968.2010.01965.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006884210"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6968.2010.01965.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006884210"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2006.01186.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007257802"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1046/j.1365-2672.2002.01679.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007373240"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1110591", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008274652"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.71.3.1501-1506.2005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008400827"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2009.02066.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011460891"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2009.02066.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011460891"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.00701-06", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011541124"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.chom.2008.02.015", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013175701"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.69.11.6808-6815.2003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013957656"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6941.2002.tb00904.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014657893"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6941.2002.tb00904.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014657893"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2009.01982.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016555528"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2009.01982.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016555528"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/4441022a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018798093", 
          "https://doi.org/10.1038/4441022a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/4441022a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018798093", 
          "https://doi.org/10.1038/4441022a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/4441022a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018798093", 
          "https://doi.org/10.1038/4441022a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6941.2008.00527.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019168176"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1177486", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019669855"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1136/gut.2004.044834", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020414638"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1743-7075-6-11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020909609", 
          "https://doi.org/10.1186/1743-7075-6-11"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/iai.00558-09", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023572974"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0168-6496(03)00207-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024099204"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1017/s0007114508094658", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024597671"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2008.01717.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024690812"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0812600106", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025980942"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.02340-06", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028376396"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.cdp.2003.09.002", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029675153"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-2672.1986.tb01073.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030137043"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkn201", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030609902"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1080/sta-200066418", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031227663"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1080/sta-200066418", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031227663"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1079/bjn2002632", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1033158036"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1111/j.1572-0241.2000.02319.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1033980664", 
          "https://doi.org/10.1111/j.1572-0241.2000.02319.x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.02272-07", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034300612"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4613-2111-8_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035108838", 
          "https://doi.org/10.1007/978-1-4613-2111-8_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4613-2111-8_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035108838", 
          "https://doi.org/10.1007/978-1-4613-2111-8_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/ijs.0.64717-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035140078"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1017/s0007114508019880", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036008301"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1017/s0007114508019880", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036008301"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1136/gut.28.5.601", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038224256"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1136/gut.28.5.601", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038224256"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.01541-09", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038354310"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0804812105", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038543620"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/mic.0.29233-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039195554"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ijo.2008.155", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041328386", 
          "https://doi.org/10.1038/ijo.2008.155"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1038/oby.2009.167", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042652144"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.00556-06", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043016291"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkn879", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044918953"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrmicro1817", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046322683", 
          "https://doi.org/10.1038/nrmicro1817"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1136/gut.34.3.386", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047048294"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkh293", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047454621"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2007.01281.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049305794"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.71.12.7724-7736.2005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050283104"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074543223", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074543230", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074954395", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1075625288", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/ajcn/80.6.1658", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1076976702"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/ajcn.82.3.559", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1077111242"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1078873234", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1081233105", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1082420273", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1083312568", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1083324434", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/ajcn/82.3.559", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1101087223"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2011-02", 
    "datePublishedReg": "2011-02-01", 
    "description": "The populations of dominant species within the human colonic microbiota can potentially be modified by dietary intake with consequences for health. Here we examined the influence of precisely controlled diets in 14 overweight men. Volunteers were provided successively with a control diet, diets high in resistant starch (RS) or non-starch polysaccharides (NSPs) and a reduced carbohydrate weight loss (WL) diet, over 10 weeks. Analysis of 16S rRNA sequences in stool samples of six volunteers detected 320 phylotypes (defined at >98% identity) of which 26, including 19 cultured species, each accounted for >1% of sequences. Although samples clustered more strongly by individual than by diet, time courses obtained by targeted qPCR revealed that 'blooms' in specific bacterial groups occurred rapidly after a dietary change. These were rapidly reversed by the subsequent diet. Relatives of Ruminococcus bromii (R-ruminococci) increased in most volunteers on the RS diet, accounting for a mean of 17% of total bacteria compared with 3.8% on the NSP diet, whereas the uncultured Oscillibacter group increased on the RS and WL diets. Relatives of Eubacterium rectale increased on RS (to mean 10.1%) but decreased, along with Collinsella aerofaciens, on WL. Inter-individual variation was marked, however, with >60% of RS remaining unfermented in two volunteers on the RS diet, compared to <4% in the other 12 volunteers; these two individuals also showed low numbers of R-ruminococci (<1%). Dietary non-digestible carbohydrate can produce marked changes in the gut microbiota, but these depend on the initial composition of an individual's gut microbiota.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1038/ismej.2010.118", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1038436", 
        "issn": [
          "1751-7362", 
          "1751-7370"
        ], 
        "name": "The ISME Journal", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "2", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "5"
      }
    ], 
    "name": "Dominant and diet-responsive groups of bacteria within the human colonic microbiota", 
    "pagination": "220", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "dee45d765c2a97748416119d0424231e53542743eb2ab0cb939a38e5d4b3d76b"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "20686513"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101301086"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/ismej.2010.118"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1046790587"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/ismej.2010.118", 
      "https://app.dimensions.ai/details/publication/pub.1046790587"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T18:09", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8675_00000434.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://www.nature.com/articles/ismej2010118"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/ismej.2010.118'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/ismej.2010.118'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/ismej.2010.118'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/ismej.2010.118'


 

This table displays all metadata directly associated to this object as RDF triples.

411 TRIPLES      21 PREDICATES      103 URIs      36 LITERALS      24 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/ismej.2010.118 schema:about N12be36d2153b49c4b449fb398cf7f24c
2 N21a9a865d3c5428eb552ba397e92f232
3 N5a9690e3f72b4fe39e1d534f1035fdf3
4 N73f8230466754eb9866e8b42cec4524c
5 N7de509b988b04dd996360a764b50d166
6 N8968516b9851441ab486d56333f2e11b
7 N90a63dc4dbc54f0faac3b236b92bd5a6
8 N958d0b1b62eb4e0ea3467d9f97ec917e
9 N9c37620ebc0c4a8a8259c9de2423e3b7
10 N9c66f1e966dd460fb288d64b4b40e8e9
11 Naa6b64f8ed2245f087056094864d846d
12 Nbe1a626900ff427d86edc5ff5a5f2553
13 Nc3e036acf6c24b20bb13e5fb5b19259e
14 Nd1a0337f64e2479694c5862aa8c93353
15 Nd658b345f8a44b53a2e69f4b4dea3acf
16 anzsrc-for:11
17 anzsrc-for:1111
18 schema:author N81af5fe9f3094f919492cf73c2f52f72
19 schema:citation sg:pub.10.1007/978-1-4613-2111-8_2
20 sg:pub.10.1038/4441022a
21 sg:pub.10.1038/ijo.2008.155
22 sg:pub.10.1038/nrmicro1817
23 sg:pub.10.1111/j.1572-0241.2000.02319.x
24 sg:pub.10.1186/1743-7075-6-11
25 https://app.dimensions.ai/details/publication/pub.1074543223
26 https://app.dimensions.ai/details/publication/pub.1074543230
27 https://app.dimensions.ai/details/publication/pub.1074954395
28 https://app.dimensions.ai/details/publication/pub.1075625288
29 https://app.dimensions.ai/details/publication/pub.1078873234
30 https://app.dimensions.ai/details/publication/pub.1081233105
31 https://app.dimensions.ai/details/publication/pub.1082420273
32 https://app.dimensions.ai/details/publication/pub.1083312568
33 https://app.dimensions.ai/details/publication/pub.1083324434
34 https://doi.org/10.1016/j.cdp.2003.09.002
35 https://doi.org/10.1016/j.chom.2008.02.015
36 https://doi.org/10.1016/s0168-6496(03)00207-1
37 https://doi.org/10.1017/s0007114508019880
38 https://doi.org/10.1017/s0007114508094658
39 https://doi.org/10.1038/oby.2009.167
40 https://doi.org/10.1046/j.1365-2672.2002.01679.x
41 https://doi.org/10.1073/pnas.0804812105
42 https://doi.org/10.1073/pnas.0812600106
43 https://doi.org/10.1079/bjn2002632
44 https://doi.org/10.1080/sta-200066418
45 https://doi.org/10.1093/ajcn.82.3.559
46 https://doi.org/10.1093/ajcn/80.6.1658
47 https://doi.org/10.1093/ajcn/82.3.559
48 https://doi.org/10.1093/nar/gkh293
49 https://doi.org/10.1093/nar/gkn201
50 https://doi.org/10.1093/nar/gkn879
51 https://doi.org/10.1099/ijs.0.64717-0
52 https://doi.org/10.1099/mic.0.29233-0
53 https://doi.org/10.1111/j.1365-2672.1986.tb01073.x
54 https://doi.org/10.1111/j.1462-2920.2006.01186.x
55 https://doi.org/10.1111/j.1462-2920.2007.01281.x
56 https://doi.org/10.1111/j.1462-2920.2008.01717.x
57 https://doi.org/10.1111/j.1462-2920.2008.01815.x
58 https://doi.org/10.1111/j.1462-2920.2009.01982.x
59 https://doi.org/10.1111/j.1462-2920.2009.02066.x
60 https://doi.org/10.1111/j.1574-6941.2002.tb00904.x
61 https://doi.org/10.1111/j.1574-6941.2008.00527.x
62 https://doi.org/10.1111/j.1574-6968.2010.01965.x
63 https://doi.org/10.1126/science.1110591
64 https://doi.org/10.1126/science.1177486
65 https://doi.org/10.1128/aem.00556-06
66 https://doi.org/10.1128/aem.00701-06
67 https://doi.org/10.1128/aem.01541-09
68 https://doi.org/10.1128/aem.02272-07
69 https://doi.org/10.1128/aem.02340-06
70 https://doi.org/10.1128/aem.69.11.6808-6815.2003
71 https://doi.org/10.1128/aem.71.12.7724-7736.2005
72 https://doi.org/10.1128/aem.71.3.1501-1506.2005
73 https://doi.org/10.1128/iai.00558-09
74 https://doi.org/10.1136/gut.2004.044834
75 https://doi.org/10.1136/gut.28.5.601
76 https://doi.org/10.1136/gut.34.3.386
77 https://doi.org/10.2337/db06-1491
78 schema:datePublished 2011-02
79 schema:datePublishedReg 2011-02-01
80 schema:description The populations of dominant species within the human colonic microbiota can potentially be modified by dietary intake with consequences for health. Here we examined the influence of precisely controlled diets in 14 overweight men. Volunteers were provided successively with a control diet, diets high in resistant starch (RS) or non-starch polysaccharides (NSPs) and a reduced carbohydrate weight loss (WL) diet, over 10 weeks. Analysis of 16S rRNA sequences in stool samples of six volunteers detected 320 phylotypes (defined at >98% identity) of which 26, including 19 cultured species, each accounted for >1% of sequences. Although samples clustered more strongly by individual than by diet, time courses obtained by targeted qPCR revealed that 'blooms' in specific bacterial groups occurred rapidly after a dietary change. These were rapidly reversed by the subsequent diet. Relatives of Ruminococcus bromii (R-ruminococci) increased in most volunteers on the RS diet, accounting for a mean of 17% of total bacteria compared with 3.8% on the NSP diet, whereas the uncultured Oscillibacter group increased on the RS and WL diets. Relatives of Eubacterium rectale increased on RS (to mean 10.1%) but decreased, along with Collinsella aerofaciens, on WL. Inter-individual variation was marked, however, with >60% of RS remaining unfermented in two volunteers on the RS diet, compared to <4% in the other 12 volunteers; these two individuals also showed low numbers of R-ruminococci (<1%). Dietary non-digestible carbohydrate can produce marked changes in the gut microbiota, but these depend on the initial composition of an individual's gut microbiota.
81 schema:genre research_article
82 schema:inLanguage en
83 schema:isAccessibleForFree true
84 schema:isPartOf N042cc52b52524650938f04a575c0fe83
85 N81b57a2e79424dcaab4d5cae30de1e52
86 sg:journal.1038436
87 schema:name Dominant and diet-responsive groups of bacteria within the human colonic microbiota
88 schema:pagination 220
89 schema:productId N09c04d889c434d70a209fa993dcb43a1
90 N1360fd82a691458ebf75a576f5fb4690
91 N562286f4a5c3403299f22aafbd7e0a88
92 N630da4f237c643c6ae0bb40dfcef93d9
93 N7c0334bfbf7e4780b5bee491ac486bed
94 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046790587
95 https://doi.org/10.1038/ismej.2010.118
96 schema:sdDatePublished 2019-04-10T18:09
97 schema:sdLicense https://scigraph.springernature.com/explorer/license/
98 schema:sdPublisher Nf493ec2ff08641fa9e9664cd6c9ff7d8
99 schema:url https://www.nature.com/articles/ismej2010118
100 sgo:license sg:explorer/license/
101 sgo:sdDataset articles
102 rdf:type schema:ScholarlyArticle
103 N042cc52b52524650938f04a575c0fe83 schema:issueNumber 2
104 rdf:type schema:PublicationIssue
105 N09c04d889c434d70a209fa993dcb43a1 schema:name readcube_id
106 schema:value dee45d765c2a97748416119d0424231e53542743eb2ab0cb939a38e5d4b3d76b
107 rdf:type schema:PropertyValue
108 N12be36d2153b49c4b449fb398cf7f24c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
109 schema:name Diet
110 rdf:type schema:DefinedTerm
111 N1360fd82a691458ebf75a576f5fb4690 schema:name nlm_unique_id
112 schema:value 101301086
113 rdf:type schema:PropertyValue
114 N1d51af950e8f497da38002bb007e0a0b rdf:first sg:person.01273656103.87
115 rdf:rest N89fbd51ade7d407790f8a00de2d269d3
116 N21a9a865d3c5428eb552ba397e92f232 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
117 schema:name Bacteria
118 rdf:type schema:DefinedTerm
119 N364923b0e25a4b33aef73a2f8f43d34d rdf:first sg:person.01105527007.07
120 rdf:rest N3fd2e6c0a65e4baaa6f858ef2fc7f2bb
121 N3fd2e6c0a65e4baaa6f858ef2fc7f2bb rdf:first N7f08c648de304b358fa31ed10ceacd6f
122 rdf:rest N73d761c1faa844bca21de5c6757f5037
123 N43e99864b825402eb0cbde1f235e16f0 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
124 schema:familyName Webster
125 schema:givenName Lucy M
126 rdf:type schema:Person
127 N44f5776c41894a5bac074653af8f1767 rdf:first sg:person.01250203741.85
128 rdf:rest N1d51af950e8f497da38002bb007e0a0b
129 N562286f4a5c3403299f22aafbd7e0a88 schema:name pubmed_id
130 schema:value 20686513
131 rdf:type schema:PropertyValue
132 N5a9690e3f72b4fe39e1d534f1035fdf3 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
133 schema:name Metagenome
134 rdf:type schema:DefinedTerm
135 N60a7efee35e74e30b135936df7e2e549 rdf:first sg:person.01030443474.25
136 rdf:rest N44f5776c41894a5bac074653af8f1767
137 N630da4f237c643c6ae0bb40dfcef93d9 schema:name dimensions_id
138 schema:value pub.1046790587
139 rdf:type schema:PropertyValue
140 N672bdcb351e44c338331b4a9ef8f736e rdf:first sg:person.0774445021.76
141 rdf:rest N6b4cae30c6ed424f8157dafe8467e51e
142 N6b4cae30c6ed424f8157dafe8467e51e rdf:first sg:person.01206005646.02
143 rdf:rest Nddb7722f3ec742de9c2567c9424ae2cc
144 N6f14b053633b4adba55308ac8e6b26e2 rdf:first sg:person.0614437151.98
145 rdf:rest Nca36a333ac35426c9257333d743644c0
146 N73d761c1faa844bca21de5c6757f5037 rdf:first sg:person.0715265632.22
147 rdf:rest Nf5a723a6c5b34d99b0ad5950cee489f9
148 N73f8230466754eb9866e8b42cec4524c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
149 schema:name Humans
150 rdf:type schema:DefinedTerm
151 N7c0334bfbf7e4780b5bee491ac486bed schema:name doi
152 schema:value 10.1038/ismej.2010.118
153 rdf:type schema:PropertyValue
154 N7de509b988b04dd996360a764b50d166 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
155 schema:name Starch
156 rdf:type schema:DefinedTerm
157 N7f08c648de304b358fa31ed10ceacd6f schema:affiliation https://www.grid.ac/institutes/grid.7107.1
158 schema:familyName Bergerat
159 schema:givenName Aurore
160 rdf:type schema:Person
161 N81af5fe9f3094f919492cf73c2f52f72 rdf:first sg:person.01335507476.10
162 rdf:rest N672bdcb351e44c338331b4a9ef8f736e
163 N81b57a2e79424dcaab4d5cae30de1e52 schema:volumeNumber 5
164 rdf:type schema:PublicationVolume
165 N8968516b9851441ab486d56333f2e11b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
166 schema:name Archaea
167 rdf:type schema:DefinedTerm
168 N89fbd51ade7d407790f8a00de2d269d3 rdf:first sg:person.01021722152.69
169 rdf:rest rdf:nil
170 N90a63dc4dbc54f0faac3b236b92bd5a6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
171 schema:name RNA, Ribosomal, 16S
172 rdf:type schema:DefinedTerm
173 N958d0b1b62eb4e0ea3467d9f97ec917e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
174 schema:name Dietary Carbohydrates
175 rdf:type schema:DefinedTerm
176 N9c37620ebc0c4a8a8259c9de2423e3b7 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
177 schema:name Colon
178 rdf:type schema:DefinedTerm
179 N9c66f1e966dd460fb288d64b4b40e8e9 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
180 schema:name Biodiversity
181 rdf:type schema:DefinedTerm
182 N9fbad970cb184908b8edeaf1f38e3dc2 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
183 schema:familyName Brown
184 schema:givenName David
185 rdf:type schema:Person
186 Na65a82eabfb8462da5074474afc487f0 rdf:first sg:person.01013170777.32
187 rdf:rest N6f14b053633b4adba55308ac8e6b26e2
188 Naa6b64f8ed2245f087056094864d846d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
189 schema:name Cross-Over Studies
190 rdf:type schema:DefinedTerm
191 Nbe1a626900ff427d86edc5ff5a5f2553 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
192 schema:name Dietary Proteins
193 rdf:type schema:DefinedTerm
194 Nc3e036acf6c24b20bb13e5fb5b19259e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
195 schema:name Male
196 rdf:type schema:DefinedTerm
197 Nca36a333ac35426c9257333d743644c0 rdf:first N9fbad970cb184908b8edeaf1f38e3dc2
198 rdf:rest Ne38d43dc20b4445599d21667e0ee4832
199 Nd1a0337f64e2479694c5862aa8c93353 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
200 schema:name Diet, Reducing
201 rdf:type schema:DefinedTerm
202 Nd658b345f8a44b53a2e69f4b4dea3acf schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
203 schema:name Feces
204 rdf:type schema:DefinedTerm
205 Nddb7722f3ec742de9c2567c9424ae2cc rdf:first N43e99864b825402eb0cbde1f235e16f0
206 rdf:rest Na65a82eabfb8462da5074474afc487f0
207 Ne38d43dc20b4445599d21667e0ee4832 rdf:first sg:person.0667712766.39
208 rdf:rest N364923b0e25a4b33aef73a2f8f43d34d
209 Nf493ec2ff08641fa9e9664cd6c9ff7d8 schema:name Springer Nature - SN SciGraph project
210 rdf:type schema:Organization
211 Nf5a723a6c5b34d99b0ad5950cee489f9 rdf:first sg:person.0714640405.30
212 rdf:rest N60a7efee35e74e30b135936df7e2e549
213 anzsrc-for:11 schema:inDefinedTermSet anzsrc-for:
214 schema:name Medical and Health Sciences
215 rdf:type schema:DefinedTerm
216 anzsrc-for:1111 schema:inDefinedTermSet anzsrc-for:
217 schema:name Nutrition and Dietetics
218 rdf:type schema:DefinedTerm
219 sg:journal.1038436 schema:issn 1751-7362
220 1751-7370
221 schema:name The ISME Journal
222 rdf:type schema:Periodical
223 sg:person.01013170777.32 schema:affiliation https://www.grid.ac/institutes/grid.450566.4
224 schema:familyName Holtrop
225 schema:givenName Grietje
226 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013170777.32
227 rdf:type schema:Person
228 sg:person.01021722152.69 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
229 schema:familyName Flint
230 schema:givenName Harry J
231 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021722152.69
232 rdf:type schema:Person
233 sg:person.01030443474.25 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
234 schema:familyName Johnstone
235 schema:givenName Alexandra M
236 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01030443474.25
237 rdf:type schema:Person
238 sg:person.01105527007.07 schema:affiliation https://www.grid.ac/institutes/grid.10306.34
239 schema:familyName Scott
240 schema:givenName Paul
241 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01105527007.07
242 rdf:type schema:Person
243 sg:person.01206005646.02 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
244 schema:familyName Duncan
245 schema:givenName Sylvia H
246 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01206005646.02
247 rdf:type schema:Person
248 sg:person.01250203741.85 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
249 schema:familyName Lobley
250 schema:givenName Gerald E
251 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01250203741.85
252 rdf:type schema:Person
253 sg:person.01273656103.87 schema:affiliation https://www.grid.ac/institutes/grid.10306.34
254 schema:familyName Parkhill
255 schema:givenName Julian
256 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01273656103.87
257 rdf:type schema:Person
258 sg:person.01335507476.10 schema:affiliation https://www.grid.ac/institutes/grid.10306.34
259 schema:familyName Walker
260 schema:givenName Alan W
261 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335507476.10
262 rdf:type schema:Person
263 sg:person.0614437151.98 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
264 schema:familyName Ze
265 schema:givenName Xiaolei
266 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0614437151.98
267 rdf:type schema:Person
268 sg:person.0667712766.39 schema:affiliation https://www.grid.ac/institutes/grid.10306.34
269 schema:familyName Stares
270 schema:givenName Mark D
271 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0667712766.39
272 rdf:type schema:Person
273 sg:person.0714640405.30 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
274 schema:familyName McIntosh
275 schema:givenName Freda
276 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0714640405.30
277 rdf:type schema:Person
278 sg:person.0715265632.22 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
279 schema:familyName Louis
280 schema:givenName Petra
281 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0715265632.22
282 rdf:type schema:Person
283 sg:person.0774445021.76 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
284 schema:familyName Ince
285 schema:givenName Jennifer
286 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0774445021.76
287 rdf:type schema:Person
288 sg:pub.10.1007/978-1-4613-2111-8_2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035108838
289 https://doi.org/10.1007/978-1-4613-2111-8_2
290 rdf:type schema:CreativeWork
291 sg:pub.10.1038/4441022a schema:sameAs https://app.dimensions.ai/details/publication/pub.1018798093
292 https://doi.org/10.1038/4441022a
293 rdf:type schema:CreativeWork
294 sg:pub.10.1038/ijo.2008.155 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041328386
295 https://doi.org/10.1038/ijo.2008.155
296 rdf:type schema:CreativeWork
297 sg:pub.10.1038/nrmicro1817 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046322683
298 https://doi.org/10.1038/nrmicro1817
299 rdf:type schema:CreativeWork
300 sg:pub.10.1111/j.1572-0241.2000.02319.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1033980664
301 https://doi.org/10.1111/j.1572-0241.2000.02319.x
302 rdf:type schema:CreativeWork
303 sg:pub.10.1186/1743-7075-6-11 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020909609
304 https://doi.org/10.1186/1743-7075-6-11
305 rdf:type schema:CreativeWork
306 https://app.dimensions.ai/details/publication/pub.1074543223 schema:CreativeWork
307 https://app.dimensions.ai/details/publication/pub.1074543230 schema:CreativeWork
308 https://app.dimensions.ai/details/publication/pub.1074954395 schema:CreativeWork
309 https://app.dimensions.ai/details/publication/pub.1075625288 schema:CreativeWork
310 https://app.dimensions.ai/details/publication/pub.1078873234 schema:CreativeWork
311 https://app.dimensions.ai/details/publication/pub.1081233105 schema:CreativeWork
312 https://app.dimensions.ai/details/publication/pub.1082420273 schema:CreativeWork
313 https://app.dimensions.ai/details/publication/pub.1083312568 schema:CreativeWork
314 https://app.dimensions.ai/details/publication/pub.1083324434 schema:CreativeWork
315 https://doi.org/10.1016/j.cdp.2003.09.002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029675153
316 rdf:type schema:CreativeWork
317 https://doi.org/10.1016/j.chom.2008.02.015 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013175701
318 rdf:type schema:CreativeWork
319 https://doi.org/10.1016/s0168-6496(03)00207-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024099204
320 rdf:type schema:CreativeWork
321 https://doi.org/10.1017/s0007114508019880 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036008301
322 rdf:type schema:CreativeWork
323 https://doi.org/10.1017/s0007114508094658 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024597671
324 rdf:type schema:CreativeWork
325 https://doi.org/10.1038/oby.2009.167 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042652144
326 rdf:type schema:CreativeWork
327 https://doi.org/10.1046/j.1365-2672.2002.01679.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1007373240
328 rdf:type schema:CreativeWork
329 https://doi.org/10.1073/pnas.0804812105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038543620
330 rdf:type schema:CreativeWork
331 https://doi.org/10.1073/pnas.0812600106 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025980942
332 rdf:type schema:CreativeWork
333 https://doi.org/10.1079/bjn2002632 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033158036
334 rdf:type schema:CreativeWork
335 https://doi.org/10.1080/sta-200066418 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031227663
336 rdf:type schema:CreativeWork
337 https://doi.org/10.1093/ajcn.82.3.559 schema:sameAs https://app.dimensions.ai/details/publication/pub.1077111242
338 rdf:type schema:CreativeWork
339 https://doi.org/10.1093/ajcn/80.6.1658 schema:sameAs https://app.dimensions.ai/details/publication/pub.1076976702
340 rdf:type schema:CreativeWork
341 https://doi.org/10.1093/ajcn/82.3.559 schema:sameAs https://app.dimensions.ai/details/publication/pub.1101087223
342 rdf:type schema:CreativeWork
343 https://doi.org/10.1093/nar/gkh293 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047454621
344 rdf:type schema:CreativeWork
345 https://doi.org/10.1093/nar/gkn201 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030609902
346 rdf:type schema:CreativeWork
347 https://doi.org/10.1093/nar/gkn879 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044918953
348 rdf:type schema:CreativeWork
349 https://doi.org/10.1099/ijs.0.64717-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035140078
350 rdf:type schema:CreativeWork
351 https://doi.org/10.1099/mic.0.29233-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039195554
352 rdf:type schema:CreativeWork
353 https://doi.org/10.1111/j.1365-2672.1986.tb01073.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1030137043
354 rdf:type schema:CreativeWork
355 https://doi.org/10.1111/j.1462-2920.2006.01186.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1007257802
356 rdf:type schema:CreativeWork
357 https://doi.org/10.1111/j.1462-2920.2007.01281.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1049305794
358 rdf:type schema:CreativeWork
359 https://doi.org/10.1111/j.1462-2920.2008.01717.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1024690812
360 rdf:type schema:CreativeWork
361 https://doi.org/10.1111/j.1462-2920.2008.01815.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1006139925
362 rdf:type schema:CreativeWork
363 https://doi.org/10.1111/j.1462-2920.2009.01982.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1016555528
364 rdf:type schema:CreativeWork
365 https://doi.org/10.1111/j.1462-2920.2009.02066.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1011460891
366 rdf:type schema:CreativeWork
367 https://doi.org/10.1111/j.1574-6941.2002.tb00904.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1014657893
368 rdf:type schema:CreativeWork
369 https://doi.org/10.1111/j.1574-6941.2008.00527.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1019168176
370 rdf:type schema:CreativeWork
371 https://doi.org/10.1111/j.1574-6968.2010.01965.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1006884210
372 rdf:type schema:CreativeWork
373 https://doi.org/10.1126/science.1110591 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008274652
374 rdf:type schema:CreativeWork
375 https://doi.org/10.1126/science.1177486 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019669855
376 rdf:type schema:CreativeWork
377 https://doi.org/10.1128/aem.00556-06 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043016291
378 rdf:type schema:CreativeWork
379 https://doi.org/10.1128/aem.00701-06 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011541124
380 rdf:type schema:CreativeWork
381 https://doi.org/10.1128/aem.01541-09 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038354310
382 rdf:type schema:CreativeWork
383 https://doi.org/10.1128/aem.02272-07 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034300612
384 rdf:type schema:CreativeWork
385 https://doi.org/10.1128/aem.02340-06 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028376396
386 rdf:type schema:CreativeWork
387 https://doi.org/10.1128/aem.69.11.6808-6815.2003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013957656
388 rdf:type schema:CreativeWork
389 https://doi.org/10.1128/aem.71.12.7724-7736.2005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050283104
390 rdf:type schema:CreativeWork
391 https://doi.org/10.1128/aem.71.3.1501-1506.2005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008400827
392 rdf:type schema:CreativeWork
393 https://doi.org/10.1128/iai.00558-09 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023572974
394 rdf:type schema:CreativeWork
395 https://doi.org/10.1136/gut.2004.044834 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020414638
396 rdf:type schema:CreativeWork
397 https://doi.org/10.1136/gut.28.5.601 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038224256
398 rdf:type schema:CreativeWork
399 https://doi.org/10.1136/gut.34.3.386 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047048294
400 rdf:type schema:CreativeWork
401 https://doi.org/10.2337/db06-1491 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001015195
402 rdf:type schema:CreativeWork
403 https://www.grid.ac/institutes/grid.10306.34 schema:alternateName Wellcome Sanger Institute
404 schema:name Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK
405 rdf:type schema:Organization
406 https://www.grid.ac/institutes/grid.450566.4 schema:alternateName Biomathematics and Statistics Scotland
407 schema:name Biomathematics and Statistics Scotland, Aberdeen, UK
408 rdf:type schema:Organization
409 https://www.grid.ac/institutes/grid.7107.1 schema:alternateName University of Aberdeen
410 schema:name Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK
411 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...