Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2010-05

AUTHORS

Christopher L Hemme, Ye Deng, Terry J Gentry, Matthew W Fields, Liyou Wu, Soumitra Barua, Kerrie Barry, Susannah G Tringe, David B Watson, Zhili He, Terry C Hazen, James M Tiedje, Edward M Rubin, Jizhong Zhou

ABSTRACT

Understanding adaptation of biological communities to environmental change is a central issue in ecology and evolution. Metagenomic analysis of a stressed groundwater microbial community reveals that prolonged exposure to high concentrations of heavy metals, nitric acid and organic solvents ( approximately 50 years) has resulted in a massive decrease in species and allelic diversity as well as a significant loss of metabolic diversity. Although the surviving microbial community possesses all metabolic pathways necessary for survival and growth in such an extreme environment, its structure is very simple, primarily composed of clonal denitrifying gamma- and beta-proteobacterial populations. The resulting community is overabundant in key genes conferring resistance to specific stresses including nitrate, heavy metals and acetone. Evolutionary analysis indicates that lateral gene transfer could have a key function in rapid response and adaptation to environmental contamination. The results presented in this study have important implications in understanding, assessing and predicting the impacts of human-induced activities on microbial communities ranging from human health to agriculture to environmental management, and their responses to environmental changes. More... »

PAGES

660

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/ismej.2009.154

DOI

http://dx.doi.org/10.1038/ismej.2009.154

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1019965488

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/20182523


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