Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2009-01

AUTHORS

Chiachi Hwang, Weimin Wu, Terry J Gentry, Jack Carley, Gail A Corbin, Sue L Carroll, David B Watson, Phil M Jardine, Jizhong Zhou, Craig S Criddle, Matthew W Fields

ABSTRACT

Bacterial community succession was investigated in a field-scale subsurface reactor formed by a series of wells that received weekly ethanol additions to re-circulating groundwater. Ethanol additions stimulated denitrification, metal reduction, sulfate reduction and U(VI) reduction to sparingly soluble U(IV). Clone libraries of SSU rRNA gene sequences from groundwater samples enabled tracking of spatial and temporal changes over a 1.5-year period. Analyses showed that the communities changed in a manner consistent with geochemical variations that occurred along temporal and spatial scales. Canonical correspondence analysis revealed that the levels of nitrate, uranium, sulfide, sulfate and ethanol were strongly correlated with particular bacterial populations. As sulfate and U(VI) levels declined, sequences representative of sulfate reducers and metal reducers were detected at high levels. Ultimately, sequences associated with sulfate-reducing populations predominated, and sulfate levels declined as U(VI) remained at low levels. When engineering controls were compared with the population variation through canonical ordination, changes could be related to dissolved oxygen control and ethanol addition. The data also indicated that the indigenous populations responded differently to stimulation for bioreduction; however, the two biostimulated communities became more similar after different transitions in an idiosyncratic manner. The strong associations between particular environmental variables and certain populations provide insight into the establishment of practical and successful remediation strategies in radionuclide-contaminated environments with respect to engineering controls and microbial ecology. More... »

PAGES

47

References to SciGraph publications

  • 2006-10. Column experiments to assess the effects of electron donors on the efficiency of in situ precipitation of Zn, Cd, Co and Ni in contaminated groundwater applying the biological sulfate removal technology in ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
  • 2003-08. Diversity of geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses in MICROBIAL ECOLOGY
  • 2007-08. Nutrients and Other Abiotic Factors Affecting Bacterial Communities in an Ohio River (USA) in MICROBIAL ECOLOGY
  • 2006-11. Relationships between Sediment Microbial Communities and Pollutants in Two California Salt Marshes in MICROBIAL ECOLOGY
  • 1996-02. Productivity and sustainability influenced by biodiversity in grassland ecosystems in NATURE
  • 2006-08. Changes in bacterial community structure correlate with initial operating conditions of a field-scale denitrifying fluidized bed reactor in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2002-05. Mineralogical characterization of microbial ferrihydrite and schwertmannite, and non-biogenic Al-sulfate precipitates from acid mine drainage in the Donghae mine area, Korea in ENVIRONMENTAL GEOLOGY
  • 2003-07. Characterization of Microbial Activities and U Reduction in a Shallow Aquifer Contaminated by Uranium Mill Tailings in MICROBIAL ECOLOGY
  • 2007-05. Synchrony in aquatic microbial community dynamics in THE ISME JOURNAL
  • 2008-02. Temporal Variations of Microbial Activity and Diversity in Marine Tropical Sediments (New Caledonia Lagoon) in MICROBIAL ECOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ismej.2008.77

    DOI

    http://dx.doi.org/10.1038/ismej.2008.77

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1031287685

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/18769457


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