Crystallographic structure of the T domain–DNA complex of the Brachyury transcription factor View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1997-10

AUTHORS

Christoph W. Müller, Bernhard G. Herrmann

ABSTRACT

The mouse Brachyury (T) gene is the prototype of a growing family of so-called T-box genes which encode transcriptional regulators and have been identified in a variety of invertebrates and vertebrates, including humans. Mutations in Brachyury and other T-box genes result in drastic embryonic phenotypes, indicating that T-box gene products are essential in tissue specification, morphogenesis and organogenesis. The T-box encodes a DNA-binding domain of about 180 amino-acid residues, the T domain. Here we report the X-ray structure of the T domain from Xenopus laevis in complex with a 24-nucleotide palindromic DNA duplex. We show that the protein is bound as a dimer, interacting with the major and the minor grooves of the DNA. A new type of specific DNA contact is seen, in which a carboxy-terminal helix is deeply embedded into an enlarged minor groove without bending the DNA. Hydrophobic interactions and an unusual main-chain carbonyl contact to a guanine account for sequence-specific recognition in the minor groove by this helix. Thus the structure of this T domain complex with DNA reveals a new way in which a protein can recognize DNA. More... »

PAGES

884-888

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/39929

DOI

http://dx.doi.org/10.1038/39929

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1009841769

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/9349824


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