Utility of Informative SSR Markers in the Molecular Characterization of Cytoplasmic Genetic Male Sterility-Based Hybrid and its Parents in Pigeonpea View Full Text


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Article Info

DATE

2015-02

AUTHORS

Abhishek Bohra, I. P. Singh, Ashutosh K. Yadav, Abhinav Pathak, K. R. Soren, S. K. Chaturvedi, N. Nadarajan

ABSTRACT

Pigeonpea is one of the most important pulse crops in the semi-arid tropical region, which is prone to several climatic uncertainties like unpredictable temperature, frequent drought and inconsistent rainfall. Additionally, during crop cycle pigeonpea also encounters a wide range of other biotic and abiotic constraints, ultimately leading to its fluctuating production and stagnant productivity. However, recently developed CGMS system has shown noteworthy impacts in enhancing pigeonpea productivity through exploitation of hybrid vigour. At present, A2-cytoplasm derived CGMS system has been well established in pigeonpea. Nevertheless, the commercial success of CGMS system relies largely on the continuous supply of genetically pure seeds of hybrids and corresponding parental lines. Traditionally, the genetic purity of seeds is guaranteed through conducting grow out test (GoT). In this context, DNA marker assays offer several advantages over conventional GoT especially in terms of time, space and money. Given its locus-specific and co-dominant nature, SSR or microsatellite marker is particularly suited for hybridity testing and purity assessment. Here we report a set of robust SSR markers, which could act as reliable molecular kit for ensuring the genetic purity of the CGMS-hybrid ‘IPH 09-5’ and its parental lines ‘PA 163A’ (A-or Male sterile-line) and ‘AK 261322’ (R- or Restorer-line). More... »

PAGES

13-19

References to SciGraph publications

  • 2002-05. Diversity in selected wild and cultivated species of pigeonpea using RFLP of mtDNA in EUPHYTICA
  • 1995-11. Genetic fingerprinting of pigeonpea [Cajanus cajan (L.) Millsp.] and its wild relatives using RAPD markers in THEORETICAL AND APPLIED GENETICS
  • 2008-02. Genetic characterization of a new cytoplasmic male sterility system (hau) in Brassica juncea and its transfer to B. napus in THEORETICAL AND APPLIED GENETICS
  • 2009-12. New microsatellite markers for pigeonpea (cajanus cajan (L.) millsp.) in BMC RESEARCH NOTES
  • 2012-10. An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L.) Millspaugh] derived from six mapping populations in THEORETICAL AND APPLIED GENETICS
  • 2012-01. Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers in NATURE BIOTECHNOLOGY
  • 2006-08. Low level of genetic diversity in cultivated Pigeonpea compared to its wild relatives is revealed by diversity arrays technology in THEORETICAL AND APPLIED GENETICS
  • 2006-05. AFLP Fingerprinting in Pigeonpea (Cajanus cajan (L.) Millsp.) and its Wild Relatives in GENETIC RESOURCES AND CROP EVOLUTION
  • 2008-09. Identification of informative SSR markers capable of distinguishing hybrid rice parental lines and their utilization in seed purity assessment in EUPHYTICA
  • 2012-01. The first draft of the pigeonpea genome sequence in JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY
  • 2010-08. Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [Cajanus cajan (L.) Millspaugh] in MOLECULAR BREEDING
  • 2011-12. Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.) in BMC PLANT BIOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s40009-014-0288-6

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    28 schema:description Pigeonpea is one of the most important pulse crops in the semi-arid tropical region, which is prone to several climatic uncertainties like unpredictable temperature, frequent drought and inconsistent rainfall. Additionally, during crop cycle pigeonpea also encounters a wide range of other biotic and abiotic constraints, ultimately leading to its fluctuating production and stagnant productivity. However, recently developed CGMS system has shown noteworthy impacts in enhancing pigeonpea productivity through exploitation of hybrid vigour. At present, A2-cytoplasm derived CGMS system has been well established in pigeonpea. Nevertheless, the commercial success of CGMS system relies largely on the continuous supply of genetically pure seeds of hybrids and corresponding parental lines. Traditionally, the genetic purity of seeds is guaranteed through conducting grow out test (GoT). In this context, DNA marker assays offer several advantages over conventional GoT especially in terms of time, space and money. Given its locus-specific and co-dominant nature, SSR or microsatellite marker is particularly suited for hybridity testing and purity assessment. Here we report a set of robust SSR markers, which could act as reliable molecular kit for ensuring the genetic purity of the CGMS-hybrid ‘IPH 09-5’ and its parental lines ‘PA 163A’ (A-or Male sterile-line) and ‘AK 261322’ (R- or Restorer-line).
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