A genomic dataset of single‐nucleotide polymorphisms generated by ddRAD tag sequencing in Q. petraea (Matt.) Liebl. populations from Central-Eastern Europe ... View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2021-04-19

AUTHORS

Endre Gy. Tóth, Zoltán A. Köbölkuti, Klára Cseke, József D. Kámpel, Roland Takács, Vladimir T. Tomov, Péter Ábrán, Srdjan Stojnic, Erna Vastag, Milan Mataruga, Vanja Daničić, Egzon Tahirukaj, Petar Zhelev, Sasa Orlovic, Attila Benke, Attila Borovics

ABSTRACT

Key messageThis genomic dataset provides highly variable SNP markers from georeferenced natural Quercus petraea (Matt.) Liebl. populations collected in Bulgaria, Hungary, Romania, Serbia, Bosnia and Herzegovina, Kosovo* and Albania. These SNP loci can be used to assess genetic diversity, differentiation, and population structure, and can also be used to detect signatures of selection and local adaptation. The dataset can be accessed at https://doi.org/10.5281/zenodo.3908963/ (Tóth et al.2020). Associated metadata available at https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/b6fee4fa-01e9-44d0-92f5-ad19379f9693. More... »

PAGES

43

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s13595-021-01051-6

DOI

http://dx.doi.org/10.1007/s13595-021-01051-6

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1137309431


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39 SNP loci
40 SNP markers
41 SRV
42 Serbia
43 adaptation
44 associated metadata
45 catalogue
46 dataset
47 differentiation
48 diversity
49 genetic diversity
50 genomic datasets
51 local adaptation
52 loci
53 markers
54 metadata
55 polymorphism
56 population
57 population structure
58 selection
59 sequencing
60 signatures
61 signatures of selection
62 single nucleotide polymorphisms
63 structure
64 tag sequencing
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