Phylogenetic analysis of allexiviruses identified on garlic from Australia View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-12

AUTHORS

Stephen J. Wylie, Hua Li, Michael G. K. Jones

ABSTRACT

Partial genome sequences with identity to members of the genus Allexivirus were described in Australia from Allium sativum L. (garlic). Phylogenetic analysis of coat protein and nucleotide binding protein gene sequences with those of 82 other allexivirus isolates confirmed that the Australian isolates were members of Garlic virus A, Garlic virus B, Garlic virus C, and Garlic virus D. More... »

PAGES

23-27

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s13314-011-0038-2

DOI

http://dx.doi.org/10.1007/s13314-011-0038-2

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1015953715


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wylie", 
        "givenName": "Stephen J.", 
        "id": "sg:person.01220764536.14", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220764536.14"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li", 
        "givenName": "Hua", 
        "id": "sg:person.01335213136.20", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335213136.20"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Jones", 
        "givenName": "Michael G. K.", 
        "id": "sg:person.016427007024.24", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1071/app9900046", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010247565", 
          "https://doi.org/10.1071/app9900046"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-003-0234-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011846372", 
          "https://doi.org/10.1007/s00705-003-0234-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-011-1166-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015389738", 
          "https://doi.org/10.1007/s00705-011-1166-x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-004-0304-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043812721", 
          "https://doi.org/10.1007/s00705-004-0304-0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msr121", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049273973"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.17660/actahortic.1994.358.49", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1068390624"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-12", 
    "datePublishedReg": "2012-12-01", 
    "description": "Partial genome sequences with identity to members of the genus Allexivirus were described in Australia from Allium sativum L. (garlic). Phylogenetic analysis of coat protein and nucleotide binding protein gene sequences with those of 82 other allexivirus isolates confirmed that the Australian isolates were members of Garlic virus A, Garlic virus B, Garlic virus C, and Garlic virus D.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s13314-011-0038-2", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.3565097", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1037651", 
        "issn": [
          "1833-928X"
        ], 
        "name": "Australasian Plant Disease Notes", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "7"
      }
    ], 
    "name": "Phylogenetic analysis of allexiviruses identified on garlic from Australia", 
    "pagination": "23-27", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "4c04533481688eb5a3b8fffb058edc82d192b898529e4e37f615c60cbcc37ebb"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s13314-011-0038-2"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1015953715"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s13314-011-0038-2", 
      "https://app.dimensions.ai/details/publication/pub.1015953715"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T10:04", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000347_0000000347/records_89826_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://link.springer.com/10.1007%2Fs13314-011-0038-2"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s13314-011-0038-2'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s13314-011-0038-2'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s13314-011-0038-2'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s13314-011-0038-2'


 

This table displays all metadata directly associated to this object as RDF triples.

98 TRIPLES      21 PREDICATES      33 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s13314-011-0038-2 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N0a76ac8418394a0eb599c342a19f97e9
4 schema:citation sg:pub.10.1007/s00705-003-0234-2
5 sg:pub.10.1007/s00705-004-0304-0
6 sg:pub.10.1007/s00705-011-1166-x
7 sg:pub.10.1071/app9900046
8 https://doi.org/10.1093/molbev/msr121
9 https://doi.org/10.17660/actahortic.1994.358.49
10 schema:datePublished 2012-12
11 schema:datePublishedReg 2012-12-01
12 schema:description Partial genome sequences with identity to members of the genus Allexivirus were described in Australia from Allium sativum L. (garlic). Phylogenetic analysis of coat protein and nucleotide binding protein gene sequences with those of 82 other allexivirus isolates confirmed that the Australian isolates were members of Garlic virus A, Garlic virus B, Garlic virus C, and Garlic virus D.
13 schema:genre research_article
14 schema:inLanguage en
15 schema:isAccessibleForFree true
16 schema:isPartOf N5ed904e4ec364c3ab0f8fa94bbd1ef7d
17 Nd05bb8202ca3423ca98e9499344163eb
18 sg:journal.1037651
19 schema:name Phylogenetic analysis of allexiviruses identified on garlic from Australia
20 schema:pagination 23-27
21 schema:productId N7d8aab29ff4147b59324166413c18076
22 Nba0ca585cd014f02821cf83bf897e337
23 Nccdf194bc9ef43de8622ef30b38aedb0
24 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015953715
25 https://doi.org/10.1007/s13314-011-0038-2
26 schema:sdDatePublished 2019-04-11T10:04
27 schema:sdLicense https://scigraph.springernature.com/explorer/license/
28 schema:sdPublisher N4f6272f4d2464fe79435e9141df2d38b
29 schema:url https://link.springer.com/10.1007%2Fs13314-011-0038-2
30 sgo:license sg:explorer/license/
31 sgo:sdDataset articles
32 rdf:type schema:ScholarlyArticle
33 N0a76ac8418394a0eb599c342a19f97e9 rdf:first sg:person.01220764536.14
34 rdf:rest Nd59cf6cfdb5d429aafa62779f1b31302
35 N4f6272f4d2464fe79435e9141df2d38b schema:name Springer Nature - SN SciGraph project
36 rdf:type schema:Organization
37 N5ed904e4ec364c3ab0f8fa94bbd1ef7d schema:issueNumber 1
38 rdf:type schema:PublicationIssue
39 N79e96f19143847a7be700a1fe476af76 rdf:first sg:person.016427007024.24
40 rdf:rest rdf:nil
41 N7d8aab29ff4147b59324166413c18076 schema:name readcube_id
42 schema:value 4c04533481688eb5a3b8fffb058edc82d192b898529e4e37f615c60cbcc37ebb
43 rdf:type schema:PropertyValue
44 Nba0ca585cd014f02821cf83bf897e337 schema:name dimensions_id
45 schema:value pub.1015953715
46 rdf:type schema:PropertyValue
47 Nccdf194bc9ef43de8622ef30b38aedb0 schema:name doi
48 schema:value 10.1007/s13314-011-0038-2
49 rdf:type schema:PropertyValue
50 Nd05bb8202ca3423ca98e9499344163eb schema:volumeNumber 7
51 rdf:type schema:PublicationVolume
52 Nd59cf6cfdb5d429aafa62779f1b31302 rdf:first sg:person.01335213136.20
53 rdf:rest N79e96f19143847a7be700a1fe476af76
54 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
55 schema:name Biological Sciences
56 rdf:type schema:DefinedTerm
57 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
58 schema:name Genetics
59 rdf:type schema:DefinedTerm
60 sg:grant.3565097 http://pending.schema.org/fundedItem sg:pub.10.1007/s13314-011-0038-2
61 rdf:type schema:MonetaryGrant
62 sg:journal.1037651 schema:issn 1833-928X
63 schema:name Australasian Plant Disease Notes
64 rdf:type schema:Periodical
65 sg:person.01220764536.14 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
66 schema:familyName Wylie
67 schema:givenName Stephen J.
68 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220764536.14
69 rdf:type schema:Person
70 sg:person.01335213136.20 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
71 schema:familyName Li
72 schema:givenName Hua
73 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335213136.20
74 rdf:type schema:Person
75 sg:person.016427007024.24 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
76 schema:familyName Jones
77 schema:givenName Michael G. K.
78 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24
79 rdf:type schema:Person
80 sg:pub.10.1007/s00705-003-0234-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011846372
81 https://doi.org/10.1007/s00705-003-0234-2
82 rdf:type schema:CreativeWork
83 sg:pub.10.1007/s00705-004-0304-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043812721
84 https://doi.org/10.1007/s00705-004-0304-0
85 rdf:type schema:CreativeWork
86 sg:pub.10.1007/s00705-011-1166-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1015389738
87 https://doi.org/10.1007/s00705-011-1166-x
88 rdf:type schema:CreativeWork
89 sg:pub.10.1071/app9900046 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010247565
90 https://doi.org/10.1071/app9900046
91 rdf:type schema:CreativeWork
92 https://doi.org/10.1093/molbev/msr121 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049273973
93 rdf:type schema:CreativeWork
94 https://doi.org/10.17660/actahortic.1994.358.49 schema:sameAs https://app.dimensions.ai/details/publication/pub.1068390624
95 rdf:type schema:CreativeWork
96 https://www.grid.ac/institutes/grid.1025.6 schema:alternateName Murdoch University
97 schema:name Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia
98 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...