Characterization of 12 microsatellite loci from an enriched genomic library in polyploid Tibouchina pulchra Cogn. (Melastomataceae) View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2010-12

AUTHORS

Vinícius L. G. Brito, Bianca B. Z. Vigna, Anete P. de Souza

ABSTRACT

Tibouchina pulchra is a common hermaphroditic canopy tree of the Melastomataceae in the Brazilian Atlantic Rain Forest that is important for bee communities, reforestation, soil and air bio-indication and urban ornamentation. Twelve polymorphic microsatellite markers were isolated and characterized in 89 genotypes of T. pulchra from two populations of Ubatuba and São Luís do Paraitinga municipalities (São Paulo, Brazil). The number of alleles observed for each locus ranged from 4 to 31 with an average of 12 alleles per locus. The polymorphism information content varied between 0.51 and 0.92 (average 0.74) and the discriminating power (D) ranged from 0.66 to 0.99 (average 0.87). These microsatellite markers will be useful for assessing genetic studies, conservation management, and ecological and phylogenetic evaluations. More... »

PAGES

193-196

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s12686-010-9224-3

DOI

http://dx.doi.org/10.1007/s12686-010-9224-3

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1001206468


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "State University of Campinas", 
          "id": "https://www.grid.ac/institutes/grid.411087.b", 
          "name": [
            "Plant Biology Department (DBV), Biology Institute, University of Campinas (UNICAMP), CP 6109, CEP 13083-970, Campinas, SP, Brazil"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Brito", 
        "givenName": "Vin\u00edcius L. G.", 
        "id": "sg:person.015217261037.23", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015217261037.23"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "State University of Campinas", 
          "id": "https://www.grid.ac/institutes/grid.411087.b", 
          "name": [
            "Genetic Engineering and Molecular Biology Center, University of Campinas (UNICAMP), CP 6010, CEP 13083-875, Campinas, SP, Brazil"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Vigna", 
        "givenName": "Bianca B. Z.", 
        "id": "sg:person.07777547161.52", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.07777547161.52"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "State University of Campinas", 
          "id": "https://www.grid.ac/institutes/grid.411087.b", 
          "name": [
            "Plant Biology Department (DBV), Biology Institute, University of Campinas (UNICAMP), CP 6109, CEP 13083-970, Campinas, SP, Brazil", 
            "Genetic Engineering and Molecular Biology Center, University of Campinas (UNICAMP), CP 6010, CEP 13083-875, Campinas, SP, Brazil"
          ], 
          "type": "Organization"
        }, 
        "familyName": "de Souza", 
        "givenName": "Anete P.", 
        "id": "sg:person.01055510163.70", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01055510163.70"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/s0168-9452(00)00208-9", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001935905"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.envpol.2007.06.042", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002073334"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1590/s0102-33061998000300004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008146641"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1590/s0100-84042004000200013", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010812430"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02772828", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017810145", 
          "https://doi.org/10.1007/bf02772828"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s001220051054", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027898211", 
          "https://doi.org/10.1007/s001220051054"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s001220051054", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027898211", 
          "https://doi.org/10.1007/s001220051054"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.184001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045500839"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2010-12", 
    "datePublishedReg": "2010-12-01", 
    "description": "Tibouchina pulchra is a common hermaphroditic canopy tree of the Melastomataceae in the Brazilian Atlantic Rain Forest that is important for bee communities, reforestation, soil and air bio-indication and urban ornamentation. Twelve polymorphic microsatellite markers were isolated and characterized in 89 genotypes of T. pulchra from two populations of Ubatuba and S\u00e3o Lu\u00eds do Paraitinga municipalities (S\u00e3o Paulo, Brazil). The number of alleles observed for each locus ranged from 4 to 31 with an average of 12 alleles per locus. The polymorphism information content varied between 0.51 and 0.92 (average 0.74) and the discriminating power (D) ranged from 0.66 to 0.99 (average 0.87). These microsatellite markers will be useful for assessing genetic studies, conservation management, and ecological and phylogenetic evaluations.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s12686-010-9224-3", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.4499288", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1041473", 
        "issn": [
          "1877-7252", 
          "1877-7260"
        ], 
        "name": "Conservation Genetics Resources", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "2"
      }
    ], 
    "name": "Characterization of 12 microsatellite loci from an enriched genomic library in polyploid Tibouchina pulchra Cogn. (Melastomataceae)", 
    "pagination": "193-196", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "05bf553404669faf193d6eec680485cfc2eb6f328025d79ccdd44ada256e9fc0"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s12686-010-9224-3"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1001206468"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s12686-010-9224-3", 
      "https://app.dimensions.ai/details/publication/pub.1001206468"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T10:20", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000348_0000000348/records_54331_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs12686-010-9224-3"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s12686-010-9224-3'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s12686-010-9224-3'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s12686-010-9224-3'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s12686-010-9224-3'


 

This table displays all metadata directly associated to this object as RDF triples.

101 TRIPLES      21 PREDICATES      34 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s12686-010-9224-3 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N7c9d6f262fc24f7fb8686b048111161f
4 schema:citation sg:pub.10.1007/bf02772828
5 sg:pub.10.1007/s001220051054
6 https://doi.org/10.1016/j.envpol.2007.06.042
7 https://doi.org/10.1016/s0168-9452(00)00208-9
8 https://doi.org/10.1101/gr.184001
9 https://doi.org/10.1590/s0100-84042004000200013
10 https://doi.org/10.1590/s0102-33061998000300004
11 schema:datePublished 2010-12
12 schema:datePublishedReg 2010-12-01
13 schema:description Tibouchina pulchra is a common hermaphroditic canopy tree of the Melastomataceae in the Brazilian Atlantic Rain Forest that is important for bee communities, reforestation, soil and air bio-indication and urban ornamentation. Twelve polymorphic microsatellite markers were isolated and characterized in 89 genotypes of T. pulchra from two populations of Ubatuba and São Luís do Paraitinga municipalities (São Paulo, Brazil). The number of alleles observed for each locus ranged from 4 to 31 with an average of 12 alleles per locus. The polymorphism information content varied between 0.51 and 0.92 (average 0.74) and the discriminating power (D) ranged from 0.66 to 0.99 (average 0.87). These microsatellite markers will be useful for assessing genetic studies, conservation management, and ecological and phylogenetic evaluations.
14 schema:genre research_article
15 schema:inLanguage en
16 schema:isAccessibleForFree false
17 schema:isPartOf N314d82bdf34942e9905b35afc85ecd14
18 N9695137717614b04a0d0e370a5045b06
19 sg:journal.1041473
20 schema:name Characterization of 12 microsatellite loci from an enriched genomic library in polyploid Tibouchina pulchra Cogn. (Melastomataceae)
21 schema:pagination 193-196
22 schema:productId N40757e695a164a7a90844e9eb9a13bd4
23 Naee689970e1b45f8bcf05328eb78eb4d
24 Ncc70e29736f744a4826429e408db7b8f
25 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001206468
26 https://doi.org/10.1007/s12686-010-9224-3
27 schema:sdDatePublished 2019-04-11T10:20
28 schema:sdLicense https://scigraph.springernature.com/explorer/license/
29 schema:sdPublisher N9fd133438ae346a0a191cf5b7d6e5162
30 schema:url http://link.springer.com/10.1007%2Fs12686-010-9224-3
31 sgo:license sg:explorer/license/
32 sgo:sdDataset articles
33 rdf:type schema:ScholarlyArticle
34 N1e77702c319144db919d9befd891219e rdf:first sg:person.07777547161.52
35 rdf:rest N996fa9a9d96a4d56b13ce24b161bfc3d
36 N314d82bdf34942e9905b35afc85ecd14 schema:volumeNumber 2
37 rdf:type schema:PublicationVolume
38 N40757e695a164a7a90844e9eb9a13bd4 schema:name doi
39 schema:value 10.1007/s12686-010-9224-3
40 rdf:type schema:PropertyValue
41 N7c9d6f262fc24f7fb8686b048111161f rdf:first sg:person.015217261037.23
42 rdf:rest N1e77702c319144db919d9befd891219e
43 N9695137717614b04a0d0e370a5045b06 schema:issueNumber 1
44 rdf:type schema:PublicationIssue
45 N996fa9a9d96a4d56b13ce24b161bfc3d rdf:first sg:person.01055510163.70
46 rdf:rest rdf:nil
47 N9fd133438ae346a0a191cf5b7d6e5162 schema:name Springer Nature - SN SciGraph project
48 rdf:type schema:Organization
49 Naee689970e1b45f8bcf05328eb78eb4d schema:name readcube_id
50 schema:value 05bf553404669faf193d6eec680485cfc2eb6f328025d79ccdd44ada256e9fc0
51 rdf:type schema:PropertyValue
52 Ncc70e29736f744a4826429e408db7b8f schema:name dimensions_id
53 schema:value pub.1001206468
54 rdf:type schema:PropertyValue
55 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
56 schema:name Biological Sciences
57 rdf:type schema:DefinedTerm
58 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
59 schema:name Genetics
60 rdf:type schema:DefinedTerm
61 sg:grant.4499288 http://pending.schema.org/fundedItem sg:pub.10.1007/s12686-010-9224-3
62 rdf:type schema:MonetaryGrant
63 sg:journal.1041473 schema:issn 1877-7252
64 1877-7260
65 schema:name Conservation Genetics Resources
66 rdf:type schema:Periodical
67 sg:person.01055510163.70 schema:affiliation https://www.grid.ac/institutes/grid.411087.b
68 schema:familyName de Souza
69 schema:givenName Anete P.
70 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01055510163.70
71 rdf:type schema:Person
72 sg:person.015217261037.23 schema:affiliation https://www.grid.ac/institutes/grid.411087.b
73 schema:familyName Brito
74 schema:givenName Vinícius L. G.
75 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015217261037.23
76 rdf:type schema:Person
77 sg:person.07777547161.52 schema:affiliation https://www.grid.ac/institutes/grid.411087.b
78 schema:familyName Vigna
79 schema:givenName Bianca B. Z.
80 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.07777547161.52
81 rdf:type schema:Person
82 sg:pub.10.1007/bf02772828 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017810145
83 https://doi.org/10.1007/bf02772828
84 rdf:type schema:CreativeWork
85 sg:pub.10.1007/s001220051054 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027898211
86 https://doi.org/10.1007/s001220051054
87 rdf:type schema:CreativeWork
88 https://doi.org/10.1016/j.envpol.2007.06.042 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002073334
89 rdf:type schema:CreativeWork
90 https://doi.org/10.1016/s0168-9452(00)00208-9 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001935905
91 rdf:type schema:CreativeWork
92 https://doi.org/10.1101/gr.184001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045500839
93 rdf:type schema:CreativeWork
94 https://doi.org/10.1590/s0100-84042004000200013 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010812430
95 rdf:type schema:CreativeWork
96 https://doi.org/10.1590/s0102-33061998000300004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008146641
97 rdf:type schema:CreativeWork
98 https://www.grid.ac/institutes/grid.411087.b schema:alternateName State University of Campinas
99 schema:name Genetic Engineering and Molecular Biology Center, University of Campinas (UNICAMP), CP 6010, CEP 13083-875, Campinas, SP, Brazil
100 Plant Biology Department (DBV), Biology Institute, University of Campinas (UNICAMP), CP 6109, CEP 13083-970, Campinas, SP, Brazil
101 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...