Analysis of coat protein gene sequences of begomoviruses associated with different weed species in India View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2012-02

AUTHORS

Sujay Paul, Raju Ghosh, Anirban Roy, Subrata Kumar Ghosh

ABSTRACT

Sida cordifolia L., Croton bonplandianum L., Malachra capitata L., Eclipta prostrata L., Clerodendron inerme L., Acalypha indica L., and Urena lobata L. are common weeds found all over India. They are often infected by different begomovirus complexes and may act as reservoirs of crop-infecting begomoviruses. Cloning and sequencing were done to partially characterize the begomovirus complexes associated with these weed species from the eastern part of India and their genetic pattern was compared with respective geographical isolates throughout India. Coat protein (CP) genes were found to be amplified from all the infected samples tested in this study, whereas betasatellite molecules amplified only from four infected samples (Sida, Croton, Malachra and Urena). Sequence analysis using CP genes and betasatellites of the present begomovirus complexes showed significant variation among their geographical isolates and also exhibited closeness to different crop-infecting begomovirus complexes. The majority of the weed-infecting begomovirus complexes characterized in this paper are reported for the first time from India. More... »

PAGES

95-100

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s12600-011-0202-4

DOI

http://dx.doi.org/10.1007/s12600-011-0202-4

DIMENSIONS

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