Phylogenetic relationships of Korean Sparassis latifolia based on morphological and ITS rDNA characteristics View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2013-02

AUTHORS

Rhim Ryoo, Hong-Duck Sou, Kang-Hyeon Ka, Hyun Park

ABSTRACT

Recent studies based on morphological characteristics and molecular analyses have revealed that the characteristics of Sparassis crispa from Asia are not concordant with those of collections from Europe and North America. Consequently, the Asian isolate was redefined as Sparassis latifolia. This study is the first report of Sparassis latifolia collected in Korea. The taxonomic relationships and replacement of Sparassis species were inferred from a comparison of the morphological characteristics and by molecular sequence analysis of the internal transcribed spacer (ITS) rDNA regions. In particular, this study focused on the phylogenetic relationships inferred from the biogeographical distribution of isolates within the genus Sparassis. More... »

PAGES

43-48

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s12275-013-2503-4

DOI

http://dx.doi.org/10.1007/s12275-013-2503-4

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1040120160

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23456711


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1601", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Anthropology", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/16", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Studies in Human Society", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Cluster Analysis", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "DNA, Fungal", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "DNA, Ribosomal Spacer", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Korea", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Molecular Sequence Data", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Polyporales", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Sequence Analysis, DNA", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Korea Forest Service", 
          "id": "https://www.grid.ac/institutes/grid.418977.4", 
          "name": [
            "Division of Wood Chemistry and Microbiology, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ryoo", 
        "givenName": "Rhim", 
        "id": "sg:person.010124742401.82", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010124742401.82"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Korea Forest Service", 
          "id": "https://www.grid.ac/institutes/grid.418977.4", 
          "name": [
            "Division of Wood Chemistry and Microbiology, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Sou", 
        "givenName": "Hong-Duck", 
        "id": "sg:person.0662161456.30", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0662161456.30"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Korea Forest Service", 
          "id": "https://www.grid.ac/institutes/grid.418977.4", 
          "name": [
            "Division of Wood Chemistry and Microbiology, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ka", 
        "givenName": "Kang-Hyeon", 
        "id": "sg:person.0730274656.94", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0730274656.94"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Korea Forest Service", 
          "id": "https://www.grid.ac/institutes/grid.418977.4", 
          "name": [
            "Division of Research Planning and Coordination, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Park", 
        "givenName": "Hyun", 
        "id": "sg:person.0776410056.72", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0776410056.72"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/b978-0-12-372180-8.50042-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004812051"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.mycres.2006.07.012", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008575603"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3852/mycologia.98.4.584", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021153343"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.4489/kjm.2009.37.1.049", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035727826"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btg180", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036252078"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/b978-0-12-372180-8.50038-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040412187"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/25.24.4876", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041279110"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/3762085", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1070445319"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/3762086", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1070445320"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2013-02", 
    "datePublishedReg": "2013-02-01", 
    "description": "Recent studies based on morphological characteristics and molecular analyses have revealed that the characteristics of Sparassis crispa from Asia are not concordant with those of collections from Europe and North America. Consequently, the Asian isolate was redefined as Sparassis latifolia. This study is the first report of Sparassis latifolia collected in Korea. The taxonomic relationships and replacement of Sparassis species were inferred from a comparison of the morphological characteristics and by molecular sequence analysis of the internal transcribed spacer (ITS) rDNA regions. In particular, this study focused on the phylogenetic relationships inferred from the biogeographical distribution of isolates within the genus Sparassis.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s12275-013-2503-4", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1116533", 
        "issn": [
          "1225-8873", 
          "1976-3794"
        ], 
        "name": "Journal of Microbiology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "51"
      }
    ], 
    "name": "Phylogenetic relationships of Korean Sparassis latifolia based on morphological and ITS rDNA characteristics", 
    "pagination": "43-48", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "bf1e4fd6254cf281fa1f7cdd65956413a3bad3aaa7f639ecea9574795fed23c4"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "23456711"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "9703165"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s12275-013-2503-4"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1040120160"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s12275-013-2503-4", 
      "https://app.dimensions.ai/details/publication/pub.1040120160"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T13:20", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8659_00000523.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs12275-013-2503-4"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s12275-013-2503-4'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s12275-013-2503-4'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s12275-013-2503-4'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s12275-013-2503-4'


 

This table displays all metadata directly associated to this object as RDF triples.

150 TRIPLES      21 PREDICATES      46 URIs      29 LITERALS      17 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s12275-013-2503-4 schema:about N78a90a54c3de429284a9de870333946e
2 N8a2806fa78db4e089f21bdc64b993839
3 Nb65525862cfe4ac2b50be4e3e0debadd
4 Nca507da2ad874cca84d76dd56593d4ef
5 Ne4373bb18bcb42d78a1a21342d1b62ab
6 Ne8a705c817be4915b65e68170c2fd7a2
7 Ned1fcf1de87e4dcea95e9649bd824a4c
8 Nef64ce553f68406b8d1990205d617027
9 anzsrc-for:16
10 anzsrc-for:1601
11 schema:author Nd8686e9d472141399067b7a007fa9093
12 schema:citation https://doi.org/10.1016/b978-0-12-372180-8.50038-x
13 https://doi.org/10.1016/b978-0-12-372180-8.50042-1
14 https://doi.org/10.1016/j.mycres.2006.07.012
15 https://doi.org/10.1093/bioinformatics/btg180
16 https://doi.org/10.1093/nar/25.24.4876
17 https://doi.org/10.2307/3762085
18 https://doi.org/10.2307/3762086
19 https://doi.org/10.3852/mycologia.98.4.584
20 https://doi.org/10.4489/kjm.2009.37.1.049
21 schema:datePublished 2013-02
22 schema:datePublishedReg 2013-02-01
23 schema:description Recent studies based on morphological characteristics and molecular analyses have revealed that the characteristics of Sparassis crispa from Asia are not concordant with those of collections from Europe and North America. Consequently, the Asian isolate was redefined as Sparassis latifolia. This study is the first report of Sparassis latifolia collected in Korea. The taxonomic relationships and replacement of Sparassis species were inferred from a comparison of the morphological characteristics and by molecular sequence analysis of the internal transcribed spacer (ITS) rDNA regions. In particular, this study focused on the phylogenetic relationships inferred from the biogeographical distribution of isolates within the genus Sparassis.
24 schema:genre research_article
25 schema:inLanguage en
26 schema:isAccessibleForFree false
27 schema:isPartOf N8fe8b05e021d4131ab1e4983ac389ad3
28 Nfa760aa95d894d358c68ebddf532c588
29 sg:journal.1116533
30 schema:name Phylogenetic relationships of Korean Sparassis latifolia based on morphological and ITS rDNA characteristics
31 schema:pagination 43-48
32 schema:productId N3560ee71ab7a47f48532007486d7ef71
33 N880485a7b5b647aa92d13c422b8e9510
34 N8e01908060324972afe0dc860394db4f
35 Nd37e77521b9f4424b5b0b59c426e01e3
36 Nffe5eee9961b4a20b97a94643fdfbd92
37 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040120160
38 https://doi.org/10.1007/s12275-013-2503-4
39 schema:sdDatePublished 2019-04-10T13:20
40 schema:sdLicense https://scigraph.springernature.com/explorer/license/
41 schema:sdPublisher Neda5112a088c4b15b2c8cf4f071e09b3
42 schema:url http://link.springer.com/10.1007%2Fs12275-013-2503-4
43 sgo:license sg:explorer/license/
44 sgo:sdDataset articles
45 rdf:type schema:ScholarlyArticle
46 N01f03711601640138ae93cafe0c0886d rdf:first sg:person.0776410056.72
47 rdf:rest rdf:nil
48 N10c76a4eeb58495c96858894d5f1f5e9 rdf:first sg:person.0730274656.94
49 rdf:rest N01f03711601640138ae93cafe0c0886d
50 N3560ee71ab7a47f48532007486d7ef71 schema:name dimensions_id
51 schema:value pub.1040120160
52 rdf:type schema:PropertyValue
53 N78a90a54c3de429284a9de870333946e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
54 schema:name Korea
55 rdf:type schema:DefinedTerm
56 N880485a7b5b647aa92d13c422b8e9510 schema:name doi
57 schema:value 10.1007/s12275-013-2503-4
58 rdf:type schema:PropertyValue
59 N8a2806fa78db4e089f21bdc64b993839 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
60 schema:name Sequence Analysis, DNA
61 rdf:type schema:DefinedTerm
62 N8e01908060324972afe0dc860394db4f schema:name nlm_unique_id
63 schema:value 9703165
64 rdf:type schema:PropertyValue
65 N8fe8b05e021d4131ab1e4983ac389ad3 schema:volumeNumber 51
66 rdf:type schema:PublicationVolume
67 Nb65525862cfe4ac2b50be4e3e0debadd schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
68 schema:name Polyporales
69 rdf:type schema:DefinedTerm
70 Nca507da2ad874cca84d76dd56593d4ef schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
71 schema:name DNA, Ribosomal Spacer
72 rdf:type schema:DefinedTerm
73 Nd37e77521b9f4424b5b0b59c426e01e3 schema:name pubmed_id
74 schema:value 23456711
75 rdf:type schema:PropertyValue
76 Nd8686e9d472141399067b7a007fa9093 rdf:first sg:person.010124742401.82
77 rdf:rest Nda751ade44e444cb8e9a46eb4e6a76b3
78 Nda751ade44e444cb8e9a46eb4e6a76b3 rdf:first sg:person.0662161456.30
79 rdf:rest N10c76a4eeb58495c96858894d5f1f5e9
80 Ne4373bb18bcb42d78a1a21342d1b62ab schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
81 schema:name Molecular Sequence Data
82 rdf:type schema:DefinedTerm
83 Ne8a705c817be4915b65e68170c2fd7a2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
84 schema:name DNA, Fungal
85 rdf:type schema:DefinedTerm
86 Ned1fcf1de87e4dcea95e9649bd824a4c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
87 schema:name Phylogeny
88 rdf:type schema:DefinedTerm
89 Neda5112a088c4b15b2c8cf4f071e09b3 schema:name Springer Nature - SN SciGraph project
90 rdf:type schema:Organization
91 Nef64ce553f68406b8d1990205d617027 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
92 schema:name Cluster Analysis
93 rdf:type schema:DefinedTerm
94 Nfa760aa95d894d358c68ebddf532c588 schema:issueNumber 1
95 rdf:type schema:PublicationIssue
96 Nffe5eee9961b4a20b97a94643fdfbd92 schema:name readcube_id
97 schema:value bf1e4fd6254cf281fa1f7cdd65956413a3bad3aaa7f639ecea9574795fed23c4
98 rdf:type schema:PropertyValue
99 anzsrc-for:16 schema:inDefinedTermSet anzsrc-for:
100 schema:name Studies in Human Society
101 rdf:type schema:DefinedTerm
102 anzsrc-for:1601 schema:inDefinedTermSet anzsrc-for:
103 schema:name Anthropology
104 rdf:type schema:DefinedTerm
105 sg:journal.1116533 schema:issn 1225-8873
106 1976-3794
107 schema:name Journal of Microbiology
108 rdf:type schema:Periodical
109 sg:person.010124742401.82 schema:affiliation https://www.grid.ac/institutes/grid.418977.4
110 schema:familyName Ryoo
111 schema:givenName Rhim
112 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010124742401.82
113 rdf:type schema:Person
114 sg:person.0662161456.30 schema:affiliation https://www.grid.ac/institutes/grid.418977.4
115 schema:familyName Sou
116 schema:givenName Hong-Duck
117 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0662161456.30
118 rdf:type schema:Person
119 sg:person.0730274656.94 schema:affiliation https://www.grid.ac/institutes/grid.418977.4
120 schema:familyName Ka
121 schema:givenName Kang-Hyeon
122 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0730274656.94
123 rdf:type schema:Person
124 sg:person.0776410056.72 schema:affiliation https://www.grid.ac/institutes/grid.418977.4
125 schema:familyName Park
126 schema:givenName Hyun
127 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0776410056.72
128 rdf:type schema:Person
129 https://doi.org/10.1016/b978-0-12-372180-8.50038-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1040412187
130 rdf:type schema:CreativeWork
131 https://doi.org/10.1016/b978-0-12-372180-8.50042-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004812051
132 rdf:type schema:CreativeWork
133 https://doi.org/10.1016/j.mycres.2006.07.012 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008575603
134 rdf:type schema:CreativeWork
135 https://doi.org/10.1093/bioinformatics/btg180 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036252078
136 rdf:type schema:CreativeWork
137 https://doi.org/10.1093/nar/25.24.4876 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041279110
138 rdf:type schema:CreativeWork
139 https://doi.org/10.2307/3762085 schema:sameAs https://app.dimensions.ai/details/publication/pub.1070445319
140 rdf:type schema:CreativeWork
141 https://doi.org/10.2307/3762086 schema:sameAs https://app.dimensions.ai/details/publication/pub.1070445320
142 rdf:type schema:CreativeWork
143 https://doi.org/10.3852/mycologia.98.4.584 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021153343
144 rdf:type schema:CreativeWork
145 https://doi.org/10.4489/kjm.2009.37.1.049 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035727826
146 rdf:type schema:CreativeWork
147 https://www.grid.ac/institutes/grid.418977.4 schema:alternateName Korea Forest Service
148 schema:name Division of Research Planning and Coordination, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea
149 Division of Wood Chemistry and Microbiology, Korea Forest Research Institute, 130-712, Seoul, Republic of Korea
150 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...