Expression analysis of D-type cyclin in potato (Solanum tuberosum L.) under different culture conditions View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2016-02

AUTHORS

Yong Rhee, KyungRan Hwang, Seungchan Cho, Minji Lee, Eui-Joon Kil, Seungho Choi, Bum-Soo Hahn, Donggiun Kim, Chung-Kyoon Auh, Sukchan Lee

ABSTRACT

Taken together, this study suggests that potato D-type cyclin genes are expressed differentially between in vitro and planta caused by intrinsic differences in physiology and gene action at the cellular and whole organism levels. Cyclin performs a pivotal role in control of the cell cycle by forming a complex with cyclin-dependent kinases (CDKs). In this study, the potato cyclin D3 genes (StCycD3.1, StCycD3.2, and StCycD3.3) were isolated and analyzed. A sequence analysis showed that the potato cyclin D3 genes shared high levels of sequence homology with tomato cyclin D3 genes. The potato cyclin D3 genes revealed organ-specific expression; StCycD3.1 was strongly expressed in above-ground organs, whereas StCycD3.2 was strongly expressed in underground organs. The expression patterns of the potato cyclin D3 genes were analyzed under a variety of environmental conditions such as different carbon sources and hormones. Glucose (as a carbon source) and zeatin (as a hormone) were effective single factors for increasing potato cyclin D3 expression. Sucrose and zeatin were the most effective combination for high-level induction of the genes. Time-course-based gene expression patterns were evaluated in treatments of leaf explants with combinations of different light conditions and hormones. The potato cyclin D3 genes were expressed abundantly in the presence of hormones during the late stage of long-term dark conditions. The gene expression patterns were also monitored in entire potato plants under different light conditions. The gene expression levels were consistently low under the different light regimes but potato cyclin D3 genes were up-regulated during a shift in illumination from dark to light. More... »

PAGES

36

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s11738-016-2066-1

DOI

http://dx.doi.org/10.1007/s11738-016-2066-1

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1033222759


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "The Institute of Life Science and Technology, Sungkyunkwan University, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rhee", 
        "givenName": "Yong", 
        "id": "sg:person.0576674510.19", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0576674510.19"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hwang", 
        "givenName": "KyungRan", 
        "id": "sg:person.015652410043.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015652410043.31"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cho", 
        "givenName": "Seungchan", 
        "id": "sg:person.0737077462.72", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0737077462.72"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Lee", 
        "givenName": "Minji", 
        "id": "sg:person.0757400664.34", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0757400664.34"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kil", 
        "givenName": "Eui-Joon", 
        "id": "sg:person.01220503616.48", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220503616.48"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Choi", 
        "givenName": "Seungho", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "National Academy of Agricultural Science", 
          "id": "https://www.grid.ac/institutes/grid.410912.f", 
          "name": [
            "National Academy of Agricultural Science, Rural Development Administration, 565-851, Wanju, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hahn", 
        "givenName": "Bum-Soo", 
        "id": "sg:person.01242500413.44", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01242500413.44"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Silla University", 
          "id": "https://www.grid.ac/institutes/grid.412617.7", 
          "name": [
            "Department of Biological Sciences, Silla University, 617-736, Busan, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kim", 
        "givenName": "Donggiun", 
        "id": "sg:person.01315060214.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01315060214.31"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Mokpo National University", 
          "id": "https://www.grid.ac/institutes/grid.411815.8", 
          "name": [
            "Division of Life Sciences, Mokpo National University, 1666 Youngdan-ro, Cheonggye-myeon, 534-729, Muan, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Auh", 
        "givenName": "Chung-Kyoon", 
        "id": "sg:person.0620644717.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0620644717.09"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Sungkyunkwan University", 
          "id": "https://www.grid.ac/institutes/grid.264381.a", 
          "name": [
            "Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Lee", 
        "givenName": "Sukchan", 
        "id": "sg:person.01072761013.68", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01072761013.68"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1105/tpc.10.12.2063", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005013557"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nprot.2008.73", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005355981", 
          "https://doi.org/10.1038/nprot.2008.73"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrm714", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006260960", 
          "https://doi.org/10.1038/nrm714"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrm714", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006260960", 
          "https://doi.org/10.1038/nrm714"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nrm714", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006260960", 
          "https://doi.org/10.1038/nrm714"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1105/tpc.7.11.1847", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009727507"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0092-8674(93)90636-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009780866"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1105/tpc.7.1.85", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010583956"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0968-0004(96)10031-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012388451"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/349132a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013684407", 
          "https://doi.org/10.1038/349132a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00041384", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017221806", 
          "https://doi.org/10.1007/bf00041384"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00041384", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017221806", 
          "https://doi.org/10.1007/bf00041384"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gad.813200", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017692427"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.pbi.2010.10.006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018093330"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1055/s-2004-830474", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021535717"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1055/s-2004-830474", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021535717"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1399-3054.1962.tb08052.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023703429"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1105/tpc.107.057075", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023879928"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1360-1385(03)00046-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027487646"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1360-1385(03)00046-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027487646"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/jxb/erg047", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029688805"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.5010/jpb.2003.30.4.329", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030306304"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1023/a:1015241709145", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031054257", 
          "https://doi.org/10.1023/a:1015241709145"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/jexbot/51.352.1789", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036303899"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.plaphy.2006.03.006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036574537"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35014621", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038726101", 
          "https://doi.org/10.1038/35014621"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35014621", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038726101", 
          "https://doi.org/10.1038/35014621"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1042/bj3080697", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039628005"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1042/bj3080697", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039628005"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.plaphy.2004.02.002", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042428758"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1105/tpc.11.4.509", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043006448"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1369-5266(00)00134-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045784236"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s004250000306", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046308864", 
          "https://doi.org/10.1007/s004250000306"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s004250050582", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048189380", 
          "https://doi.org/10.1007/s004250050582"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/mcb.20.13.4513-4521.2000", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051039109"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1360-1385(02)02351-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053699803"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1360-1385(02)02351-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053699803"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2016-02", 
    "datePublishedReg": "2016-02-01", 
    "description": "Taken together, this study suggests that potato D-type cyclin genes are expressed differentially between in vitro and planta caused by intrinsic differences in physiology and gene action at the cellular and whole organism levels. Cyclin performs a pivotal role in control of the cell cycle by forming a complex with cyclin-dependent kinases (CDKs). In this study, the potato cyclin D3 genes (StCycD3.1, StCycD3.2, and StCycD3.3) were isolated and analyzed. A sequence analysis showed that the potato cyclin D3 genes shared high levels of sequence homology with tomato cyclin D3 genes. The potato cyclin D3 genes revealed organ-specific expression; StCycD3.1 was strongly expressed in above-ground organs, whereas StCycD3.2 was strongly expressed in underground organs. The expression patterns of the potato cyclin D3 genes were analyzed under a variety of environmental conditions such as different carbon sources and hormones. Glucose (as a carbon source) and zeatin (as a hormone) were effective single factors for increasing potato cyclin D3 expression. Sucrose and zeatin were the most effective combination for high-level induction of the genes. Time-course-based gene expression patterns were evaluated in treatments of leaf explants with combinations of different light conditions and hormones. The potato cyclin D3 genes were expressed abundantly in the presence of hormones during the late stage of long-term dark conditions. The gene expression patterns were also monitored in entire potato plants under different light conditions. The gene expression levels were consistently low under the different light regimes but potato cyclin D3 genes were up-regulated during a shift in illumination from dark to light.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s11738-016-2066-1", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.7473626", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1031087", 
        "issn": [
          "0137-5881", 
          "1861-1664"
        ], 
        "name": "Acta Physiologiae Plantarum", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "2", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "38"
      }
    ], 
    "name": "Expression analysis of D-type cyclin in potato (Solanum tuberosum L.) under different culture conditions", 
    "pagination": "36", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "9e44c0075ca06d2e0e0a0d792adc4f199da51aac27c62556bedccbe2073cf83f"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s11738-016-2066-1"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1033222759"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s11738-016-2066-1", 
      "https://app.dimensions.ai/details/publication/pub.1033222759"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T17:34", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8672_00000522.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs11738-016-2066-1"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s11738-016-2066-1'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s11738-016-2066-1'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s11738-016-2066-1'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s11738-016-2066-1'


 

This table displays all metadata directly associated to this object as RDF triples.

230 TRIPLES      21 PREDICATES      56 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s11738-016-2066-1 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author Nd99360120083465c83e44d0676605703
4 schema:citation sg:pub.10.1007/bf00041384
5 sg:pub.10.1007/s004250000306
6 sg:pub.10.1007/s004250050582
7 sg:pub.10.1023/a:1015241709145
8 sg:pub.10.1038/349132a0
9 sg:pub.10.1038/35014621
10 sg:pub.10.1038/nprot.2008.73
11 sg:pub.10.1038/nrm714
12 https://doi.org/10.1016/0092-8674(93)90636-5
13 https://doi.org/10.1016/j.pbi.2010.10.006
14 https://doi.org/10.1016/j.plaphy.2004.02.002
15 https://doi.org/10.1016/j.plaphy.2006.03.006
16 https://doi.org/10.1016/s0968-0004(96)10031-1
17 https://doi.org/10.1016/s1360-1385(02)02351-8
18 https://doi.org/10.1016/s1360-1385(03)00046-3
19 https://doi.org/10.1016/s1369-5266(00)00134-5
20 https://doi.org/10.1042/bj3080697
21 https://doi.org/10.1055/s-2004-830474
22 https://doi.org/10.1093/jexbot/51.352.1789
23 https://doi.org/10.1093/jxb/erg047
24 https://doi.org/10.1101/gad.813200
25 https://doi.org/10.1105/tpc.10.12.2063
26 https://doi.org/10.1105/tpc.107.057075
27 https://doi.org/10.1105/tpc.11.4.509
28 https://doi.org/10.1105/tpc.7.1.85
29 https://doi.org/10.1105/tpc.7.11.1847
30 https://doi.org/10.1111/j.1399-3054.1962.tb08052.x
31 https://doi.org/10.1128/mcb.20.13.4513-4521.2000
32 https://doi.org/10.5010/jpb.2003.30.4.329
33 schema:datePublished 2016-02
34 schema:datePublishedReg 2016-02-01
35 schema:description Taken together, this study suggests that potato D-type cyclin genes are expressed differentially between in vitro and planta caused by intrinsic differences in physiology and gene action at the cellular and whole organism levels. Cyclin performs a pivotal role in control of the cell cycle by forming a complex with cyclin-dependent kinases (CDKs). In this study, the potato cyclin D3 genes (StCycD3.1, StCycD3.2, and StCycD3.3) were isolated and analyzed. A sequence analysis showed that the potato cyclin D3 genes shared high levels of sequence homology with tomato cyclin D3 genes. The potato cyclin D3 genes revealed organ-specific expression; StCycD3.1 was strongly expressed in above-ground organs, whereas StCycD3.2 was strongly expressed in underground organs. The expression patterns of the potato cyclin D3 genes were analyzed under a variety of environmental conditions such as different carbon sources and hormones. Glucose (as a carbon source) and zeatin (as a hormone) were effective single factors for increasing potato cyclin D3 expression. Sucrose and zeatin were the most effective combination for high-level induction of the genes. Time-course-based gene expression patterns were evaluated in treatments of leaf explants with combinations of different light conditions and hormones. The potato cyclin D3 genes were expressed abundantly in the presence of hormones during the late stage of long-term dark conditions. The gene expression patterns were also monitored in entire potato plants under different light conditions. The gene expression levels were consistently low under the different light regimes but potato cyclin D3 genes were up-regulated during a shift in illumination from dark to light.
36 schema:genre research_article
37 schema:inLanguage en
38 schema:isAccessibleForFree false
39 schema:isPartOf N0b2ec0833fe24075bd218b2c7619db0f
40 Na6c7d039bfc149e4b72644fbed1b9d7b
41 sg:journal.1031087
42 schema:name Expression analysis of D-type cyclin in potato (Solanum tuberosum L.) under different culture conditions
43 schema:pagination 36
44 schema:productId N44d7b57ab4634d6ab4e432740caeb9fb
45 Na97ce5cdaa27434aad20bbcdc37853ac
46 Ncc523c997f7f47b29daf6a019f52c2a3
47 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033222759
48 https://doi.org/10.1007/s11738-016-2066-1
49 schema:sdDatePublished 2019-04-10T17:34
50 schema:sdLicense https://scigraph.springernature.com/explorer/license/
51 schema:sdPublisher N178951541ba94e9d8602ecb4c09266ee
52 schema:url http://link.springer.com/10.1007%2Fs11738-016-2066-1
53 sgo:license sg:explorer/license/
54 sgo:sdDataset articles
55 rdf:type schema:ScholarlyArticle
56 N0b2ec0833fe24075bd218b2c7619db0f schema:issueNumber 2
57 rdf:type schema:PublicationIssue
58 N178951541ba94e9d8602ecb4c09266ee schema:name Springer Nature - SN SciGraph project
59 rdf:type schema:Organization
60 N204df7d5baa9400c9e4a51b9fd8758b8 rdf:first sg:person.0620644717.09
61 rdf:rest N79e88e9c04b0444da3e50798ac13fa5f
62 N444c6cd89aa048b2aae0a771205b8079 rdf:first Nf88867025b734dd69a4650e14b8f6179
63 rdf:rest Nb5a1366dd77c4419ad6363b4359c1c51
64 N44d7b57ab4634d6ab4e432740caeb9fb schema:name doi
65 schema:value 10.1007/s11738-016-2066-1
66 rdf:type schema:PropertyValue
67 N5e2574e14da844dcb88a8011f9b38c98 rdf:first sg:person.01315060214.31
68 rdf:rest N204df7d5baa9400c9e4a51b9fd8758b8
69 N79e88e9c04b0444da3e50798ac13fa5f rdf:first sg:person.01072761013.68
70 rdf:rest rdf:nil
71 N9f7a48a396f74adb8aa1e7c7c4abea49 rdf:first sg:person.015652410043.31
72 rdf:rest Nc2b0463270aa4391a97cdb6178866fe6
73 Na6c7d039bfc149e4b72644fbed1b9d7b schema:volumeNumber 38
74 rdf:type schema:PublicationVolume
75 Na97ce5cdaa27434aad20bbcdc37853ac schema:name readcube_id
76 schema:value 9e44c0075ca06d2e0e0a0d792adc4f199da51aac27c62556bedccbe2073cf83f
77 rdf:type schema:PropertyValue
78 Nb5a1366dd77c4419ad6363b4359c1c51 rdf:first sg:person.01242500413.44
79 rdf:rest N5e2574e14da844dcb88a8011f9b38c98
80 Nc2b0463270aa4391a97cdb6178866fe6 rdf:first sg:person.0737077462.72
81 rdf:rest Ne7dc31ff976a4df59023dd77d12b2080
82 Ncc523c997f7f47b29daf6a019f52c2a3 schema:name dimensions_id
83 schema:value pub.1033222759
84 rdf:type schema:PropertyValue
85 Ncfe32aa3433f409fb34c40aeab226e93 rdf:first sg:person.01220503616.48
86 rdf:rest N444c6cd89aa048b2aae0a771205b8079
87 Nd99360120083465c83e44d0676605703 rdf:first sg:person.0576674510.19
88 rdf:rest N9f7a48a396f74adb8aa1e7c7c4abea49
89 Ne7dc31ff976a4df59023dd77d12b2080 rdf:first sg:person.0757400664.34
90 rdf:rest Ncfe32aa3433f409fb34c40aeab226e93
91 Nf88867025b734dd69a4650e14b8f6179 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
92 schema:familyName Choi
93 schema:givenName Seungho
94 rdf:type schema:Person
95 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
96 schema:name Biological Sciences
97 rdf:type schema:DefinedTerm
98 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
99 schema:name Genetics
100 rdf:type schema:DefinedTerm
101 sg:grant.7473626 http://pending.schema.org/fundedItem sg:pub.10.1007/s11738-016-2066-1
102 rdf:type schema:MonetaryGrant
103 sg:journal.1031087 schema:issn 0137-5881
104 1861-1664
105 schema:name Acta Physiologiae Plantarum
106 rdf:type schema:Periodical
107 sg:person.01072761013.68 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
108 schema:familyName Lee
109 schema:givenName Sukchan
110 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01072761013.68
111 rdf:type schema:Person
112 sg:person.01220503616.48 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
113 schema:familyName Kil
114 schema:givenName Eui-Joon
115 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220503616.48
116 rdf:type schema:Person
117 sg:person.01242500413.44 schema:affiliation https://www.grid.ac/institutes/grid.410912.f
118 schema:familyName Hahn
119 schema:givenName Bum-Soo
120 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01242500413.44
121 rdf:type schema:Person
122 sg:person.01315060214.31 schema:affiliation https://www.grid.ac/institutes/grid.412617.7
123 schema:familyName Kim
124 schema:givenName Donggiun
125 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01315060214.31
126 rdf:type schema:Person
127 sg:person.015652410043.31 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
128 schema:familyName Hwang
129 schema:givenName KyungRan
130 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015652410043.31
131 rdf:type schema:Person
132 sg:person.0576674510.19 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
133 schema:familyName Rhee
134 schema:givenName Yong
135 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0576674510.19
136 rdf:type schema:Person
137 sg:person.0620644717.09 schema:affiliation https://www.grid.ac/institutes/grid.411815.8
138 schema:familyName Auh
139 schema:givenName Chung-Kyoon
140 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0620644717.09
141 rdf:type schema:Person
142 sg:person.0737077462.72 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
143 schema:familyName Cho
144 schema:givenName Seungchan
145 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0737077462.72
146 rdf:type schema:Person
147 sg:person.0757400664.34 schema:affiliation https://www.grid.ac/institutes/grid.264381.a
148 schema:familyName Lee
149 schema:givenName Minji
150 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0757400664.34
151 rdf:type schema:Person
152 sg:pub.10.1007/bf00041384 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017221806
153 https://doi.org/10.1007/bf00041384
154 rdf:type schema:CreativeWork
155 sg:pub.10.1007/s004250000306 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046308864
156 https://doi.org/10.1007/s004250000306
157 rdf:type schema:CreativeWork
158 sg:pub.10.1007/s004250050582 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048189380
159 https://doi.org/10.1007/s004250050582
160 rdf:type schema:CreativeWork
161 sg:pub.10.1023/a:1015241709145 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031054257
162 https://doi.org/10.1023/a:1015241709145
163 rdf:type schema:CreativeWork
164 sg:pub.10.1038/349132a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013684407
165 https://doi.org/10.1038/349132a0
166 rdf:type schema:CreativeWork
167 sg:pub.10.1038/35014621 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038726101
168 https://doi.org/10.1038/35014621
169 rdf:type schema:CreativeWork
170 sg:pub.10.1038/nprot.2008.73 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005355981
171 https://doi.org/10.1038/nprot.2008.73
172 rdf:type schema:CreativeWork
173 sg:pub.10.1038/nrm714 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006260960
174 https://doi.org/10.1038/nrm714
175 rdf:type schema:CreativeWork
176 https://doi.org/10.1016/0092-8674(93)90636-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009780866
177 rdf:type schema:CreativeWork
178 https://doi.org/10.1016/j.pbi.2010.10.006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018093330
179 rdf:type schema:CreativeWork
180 https://doi.org/10.1016/j.plaphy.2004.02.002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042428758
181 rdf:type schema:CreativeWork
182 https://doi.org/10.1016/j.plaphy.2006.03.006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036574537
183 rdf:type schema:CreativeWork
184 https://doi.org/10.1016/s0968-0004(96)10031-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012388451
185 rdf:type schema:CreativeWork
186 https://doi.org/10.1016/s1360-1385(02)02351-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053699803
187 rdf:type schema:CreativeWork
188 https://doi.org/10.1016/s1360-1385(03)00046-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027487646
189 rdf:type schema:CreativeWork
190 https://doi.org/10.1016/s1369-5266(00)00134-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045784236
191 rdf:type schema:CreativeWork
192 https://doi.org/10.1042/bj3080697 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039628005
193 rdf:type schema:CreativeWork
194 https://doi.org/10.1055/s-2004-830474 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021535717
195 rdf:type schema:CreativeWork
196 https://doi.org/10.1093/jexbot/51.352.1789 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036303899
197 rdf:type schema:CreativeWork
198 https://doi.org/10.1093/jxb/erg047 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029688805
199 rdf:type schema:CreativeWork
200 https://doi.org/10.1101/gad.813200 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017692427
201 rdf:type schema:CreativeWork
202 https://doi.org/10.1105/tpc.10.12.2063 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005013557
203 rdf:type schema:CreativeWork
204 https://doi.org/10.1105/tpc.107.057075 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023879928
205 rdf:type schema:CreativeWork
206 https://doi.org/10.1105/tpc.11.4.509 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043006448
207 rdf:type schema:CreativeWork
208 https://doi.org/10.1105/tpc.7.1.85 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010583956
209 rdf:type schema:CreativeWork
210 https://doi.org/10.1105/tpc.7.11.1847 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009727507
211 rdf:type schema:CreativeWork
212 https://doi.org/10.1111/j.1399-3054.1962.tb08052.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1023703429
213 rdf:type schema:CreativeWork
214 https://doi.org/10.1128/mcb.20.13.4513-4521.2000 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051039109
215 rdf:type schema:CreativeWork
216 https://doi.org/10.5010/jpb.2003.30.4.329 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030306304
217 rdf:type schema:CreativeWork
218 https://www.grid.ac/institutes/grid.264381.a schema:alternateName Sungkyunkwan University
219 schema:name Department of Genetic Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, 440-746, Suwon, South Korea
220 The Institute of Life Science and Technology, Sungkyunkwan University, 440-746, Suwon, South Korea
221 rdf:type schema:Organization
222 https://www.grid.ac/institutes/grid.410912.f schema:alternateName National Academy of Agricultural Science
223 schema:name National Academy of Agricultural Science, Rural Development Administration, 565-851, Wanju, South Korea
224 rdf:type schema:Organization
225 https://www.grid.ac/institutes/grid.411815.8 schema:alternateName Mokpo National University
226 schema:name Division of Life Sciences, Mokpo National University, 1666 Youngdan-ro, Cheonggye-myeon, 534-729, Muan, South Korea
227 rdf:type schema:Organization
228 https://www.grid.ac/institutes/grid.412617.7 schema:alternateName Silla University
229 schema:name Department of Biological Sciences, Silla University, 617-736, Busan, South Korea
230 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...