Complete genome analysis of porcine kobuviruses from the feces of pigs in Japan View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2017-05-08

AUTHORS

Masataka Akagami, Mika Ito, Kazutaka Niira, Moegi Kuroda, Tsuneyuki Masuda, Kei Haga, Shinobu Tsuchiaka, Yuki Naoi, Mai Kishimoto, Kaori Sano, Tsutomu Omatsu, Hiroshi Aoki, Yukie Katayama, Mami Oba, Tomoichiro Oka, Toru Ichimaru, Hiroshi Yamasato, Yoshinao Ouchi, Junsuke Shirai, Kazuhiko Katayama, Tetsuya Mizutani, Makoto Nagai

ABSTRACT

Porcine kobuviruses (PoKoVs) are ubiquitously distributed in pig populations worldwide and are thought to be enteric viruses in swine. Although PoKoVs have been detected in pigs in Japan, no complete genome data for Japanese PoKoVs are available. In the present study, 24 nearly complete or complete sequences of the PoKoV genome obtained from 10 diarrheic feces and 14 non-diarrheic feces of Japanese pigs were analyzed using a metagenomics approach. Japanese PoKoVs shared 85.2–100% identity with the complete coding nucleotide (nt) sequences and the closest relationship of 85.1–98.3% with PoKoVs from other countries. Twenty of 24 Japanese PoKoVs carried a deletion of 90 nt in the 2B coding region. Phylogenetic tree analyses revealed that PoKoVs were not grouped according to their geographical region of origin and the phylogenetic trees of the L, P1, P2, and P3 genetic regions showed topologies different from each other. Similarity plot analysis using strains from a single farm revealed partially different similarity patterns among strains from identical farm origins, suggesting that recombination events had occurred. These results indicate that various PoKoV strains are prevalent and not restricted geographically on pig farms worldwide and the coexistence of multiple strains leads to recombination events of PoKoVs and contributes to the genetic diversity and evolution of PoKoVs. More... »

PAGES

593-602

References to SciGraph publications

  • 2013-06-14. High frequency of Aichivirus C (porcine kobuvirus) infection in piglets from different geographic regions of Brazil in TROPICAL ANIMAL HEALTH AND PRODUCTION
  • 2015-08-28. Genomic characterization of a US porcine kobuvirus strain in ARCHIVES OF MICROBIOLOGY
  • 2011-01-28. Analysis and characterization of the complete genome of a member of a new species of kobuvirus associated with swine in ARCHIVES OF VIROLOGY
  • 2015-07-28. Full genome analysis of bovine astrovirus from fecal samples of cattle in Japan: identification of possible interspecies transmission of bovine astrovirus in ARCHIVES OF VIROLOGY
  • 2013-12-11. Molecular detection and genetic characterization of kobuviruses and astroviruses in asymptomatic local pigs in East Africa in ARCHIVES OF VIROLOGY
  • 2011-11-23. Sequence analysis of porcine kobuvirus VP1 region detected in pigs in Japan and Thailand in VIRUS GENES
  • 2014-04-29. Complete sequencing and phylogenetic analysis of porcine kobuvirus in domestic pigs in Northwest China in ARCHIVES OF VIROLOGY
  • 2013-01-20. Identification and molecular characterization of porcine kobuvirus in U. S. swine in VIRUS GENES
  • 2010-09-05. Molecular detection of porcine kobuviruses in pigs in Korea and their association with diarrhea in ARCHIVES OF VIROLOGY
  • 2008-12-19. Complete nucleotide and amino acid sequences and genetic organization of porcine kobuvirus, a member of a new species in the genus Kobuvirus, family Picornaviridae in ARCHIVES OF VIROLOGY
  • 2013-06-05. Molecular characterization of a porcine kobuvirus variant strain in China in ARCHIVES OF VIROLOGY
  • 2011-12-31. Molecular characterization of a porcine kobuvirus strain in China in ARCHIVES OF VIROLOGY
  • 2014-08-14. Genetic characterization of porcine kobuvirus and detection of coinfecting pathogens in diarrheic pigs in Jiangsu Province, China in ARCHIVES OF VIROLOGY
  • 2013-03-02. Prevalence and molecular characterization of porcine enteric caliciviruses and first detection of porcine kobuviruses in US swine in ARCHIVES OF VIROLOGY
  • 2012-11-03. Genetic diversity of porcine sapoviruses, kobuviruses, and astroviruses in asymptomatic pigs: an emerging new sapovirus GIII genotype in ARCHIVES OF VIROLOGY
  • 2012-08-29. Porcine kobuvirus in wild boars (Sus scrofa) in ARCHIVES OF VIROLOGY
  • 2010-12-16. Porcine kobuvirus from pig stool in Korea in VIRUS GENES
  • 2011-07-26. Porcine kobuvirus from pig stool specimens in Shanghai, China in VIRUS GENES
  • 2013-09-11. Molecular and phylogenetic analysis of the porcine kobuvirus VP1 region using infected pigs from Sichuan Province, China in VIROLOGY JOURNAL
  • 2015-03-27. Infection of farmed pigs with porcine kobuviruses in Italy in ARCHIVES OF VIROLOGY
  • 2013-04-12. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013) in ARCHIVES OF VIROLOGY
  • 2014-09-07. Identification and complete genome analysis of kobuvirus in faecal samples of European roller (Coracias garrulus): for the first time in a bird in ARCHIVES OF VIROLOGY
  • 2016-03-10. Metagenomic analysis demonstrates the diversity of the fecal virome in asymptomatic pigs in East Africa in ARCHIVES OF VIROLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s11262-017-1464-9

    DOI

    http://dx.doi.org/10.1007/s11262-017-1464-9

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1085218738

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/28484931


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