Identification of Early Nitrate Stress Response Genes in Spinach Roots by Suppression Subtractive Hybridization View Full Text


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Article Info

DATE

2011-11-17

AUTHORS

Huini Xu, Xiaozhao He, Kang Wang, Limei Chen, Kunzhi Li

ABSTRACT

To better understand the molecular basis of plant responses to nitrate stress, suppression subtractive hybridization (SSH) was used to identify the potential important or novel genes involved in the early stage of spinach responses to nitrate stress. Complementary DNAs (cDNAs) of 15 min, 1 h, 2 h, 6 h and 24 h of 160 mM nitrate stress treatment seedlings were used as tester, and cDNAs of normal nutrient solution seedlings of the same time were used as driver. The SSH analysis identified 189 non-redundant putative nitrate stress responsive cDNAs out of 798 clones. These ESTs were categorized into 12 functional groups, with the largest group of genes involved in metabolism, followed by the group of genes related to cell rescue, defense and virulence. Reverse transcriptase (RT)-PCR was conducted for several genes, confirming the induction by nitrate stress. The results indicated that osmolyte biosynthesis genes, reactive oxygen scavengers, transporters, signaling components and transcription factor played important roles in fighting against nitrate stress. The diversity of the putative functions of these genes indicated that nitrate stress resulted in a complex response in spinach plants. More... »

PAGES

633-642

References to SciGraph publications

  • 2006-10-12. Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes in BMC PLANT BIOLOGY
  • 2010-08-19. Simultaneous Expression of Spinacia oleracea Chloroplast Choline Monooxygenase (CMO) and Betaine Aldehyde Dehydrogenase (BADH) Genes Contribute to Dwarfism in Transgenic Lolium perenne in PLANT MOLECULAR BIOLOGY REPORTER
  • 2010-07-29. Identification of Water Deficit Stress Upregulated Genes in Sugarcane in PLANT MOLECULAR BIOLOGY REPORTER
  • 2004-08. Isolation and analysis of water stress induced genes in maize seedlings by subtractive PCR and cDNA macroarray in PLANT MOLECULAR BIOLOGY
  • 2009-09-19. Identification of Flooding-Response Genes in Eggplant Roots by Suppression Subtractive Hybridization in PLANT MOLECULAR BIOLOGY REPORTER
  • 2009-11-04. Overexpression of CsNMAPK in tobacco enhanced seed germination under salt and osmotic stresses in MOLECULAR BIOLOGY REPORTS
  • 2010-10-19. Isolation of Salt Stress Tolerance Genes from Roots of Mangrove Plant, Rhizophora stylosa Griff., Using PCR-Based Suppression Subtractive Hybridization in PLANT MOLECULAR BIOLOGY REPORTER
  • 2004-02-04. The role of GRAS proteins in plant signal transduction and development in PLANTA
  • 2010-04-10. Response of Ammonia Assimilation in Cucumber Seedlings to Nitrate Stress in JOURNAL OF PLANT BIOLOGY
  • 2011-01-25. Expression Profile of Early Responsive Genes Under Salt Stress in Upland Cotton (Gossypium hirsutum L.) in PLANT MOLECULAR BIOLOGY REPORTER
  • 2010-11-20. Gene Expression Profiles in Response to Salt Stress in Hibiscus Tiliaceus in PLANT MOLECULAR BIOLOGY REPORTER
  • 2011-10-08. Salinity-Induced Effects in the Halophyte Suaeda salsa Using NMR-based Metabolomics in PLANT MOLECULAR BIOLOGY REPORTER
  • 2002-04. Analysis of salt-inducible genes in barley roots by differential display in JOURNAL OF PLANT RESEARCH
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