Sequencing and phylogenetic characterization of a novel RNA virus genome from Harmonia axyridis View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2020-04-13

AUTHORS

Yingjie Liu, Guangwei Ren, Lianqiang Jiang, Changchun Feng, Dongyang Liu, Yongjie Liu, Pengjun Xu

ABSTRACT

As a natural predator of many insect pests on its native Asian range, Harmonia axyridis remains amongst the insects whose pathogenic or beneficial microorganisms are yet to be studied. The genome nucleotide (nt) and amino acid sequences of open reading frames (ORFs) of the novel RNA virus were identified. Neighbor-joining (NJ) were constructed using MEGA7 software packages with nt sequences and conserved amino acid sequences of predicted RNA-dependent RNA polymerase (RdRp).The complete genome of a novel virus named Harmonia axyridis virus 1 was determined by RNA-seq and rapid amplification of cDNA ends from H. axyridis, which had a single-stranded RNA genome of 8868 nts in length and contains two putative ORFs. ORF1 encodes a polypeptide of 2182 amino acids, which contained conserved domains for 2 picornavirus-like capsid proteins and one RNA helicase. ORF2 encodes a polypeptide of 655 amino acids, which contained 1 RdRp domain. Phylogenetic analysis of whole genome nt sequences and RdRp deduced amino acid sequences suggested that the virus clustered with several unclassified Hubei picorna-like virus. To our knowledge, this is the first full annotated genome of a novel member of the unclassified group of RNA viruses, infecting H. axyridis in natural field conditions. More... »

PAGES

4015-4019

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s11033-020-05418-2

DOI

http://dx.doi.org/10.1007/s11033-020-05418-2

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1126642935

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/32285328


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Amino Acid Sequence", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Animals", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Base Sequence", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Coleoptera", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Viral", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Open Reading Frames", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA Viruses", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Viral", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Viral Proteins", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Whole Genome Sequencing", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China", 
          "id": "http://www.grid.ac/institutes/grid.464493.8", 
          "name": [
            "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Liu", 
        "givenName": "Yingjie", 
        "id": "sg:person.07757276711.77", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.07757276711.77"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China", 
          "id": "http://www.grid.ac/institutes/grid.464493.8", 
          "name": [
            "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ren", 
        "givenName": "Guangwei", 
        "id": "sg:person.0651670737.25", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0651670737.25"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Jiang", 
        "givenName": "Lianqiang", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Feng", 
        "givenName": "Changchun", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Liu", 
        "givenName": "Dongyang", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "College of Plant Protection, Shandong Agricultural University, 271018, Taian, China", 
          "id": "http://www.grid.ac/institutes/grid.440622.6", 
          "name": [
            "College of Plant Protection, Shandong Agricultural University, 271018, Taian, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Liu", 
        "givenName": "Yongjie", 
        "id": "sg:person.012332074442.02", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012332074442.02"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China", 
          "id": "http://www.grid.ac/institutes/grid.464493.8", 
          "name": [
            "Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Xu", 
        "givenName": "Pengjun", 
        "id": "sg:person.0612760625.11", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0612760625.11"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/s10526-011-9379-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006355742", 
          "https://doi.org/10.1007/s10526-011-9379-1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10526-016-9766-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040189584", 
          "https://doi.org/10.1007/s10526-016-9766-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-016-3195-y", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051995045", 
          "https://doi.org/10.1007/s00705-016-3195-y"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41586-018-0012-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1101862110", 
          "https://doi.org/10.1038/s41586-018-0012-7"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10526-016-9764-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001810699", 
          "https://doi.org/10.1007/s10526-016-9764-x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-017-3622-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1092515404", 
          "https://doi.org/10.1007/s00705-017-3622-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt.1883", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015803168", 
          "https://doi.org/10.1038/nbt.1883"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/s12985-017-0691-y", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1083720043", 
          "https://doi.org/10.1186/s12985-017-0691-y"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s13258-019-00782-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111442838", 
          "https://doi.org/10.1007/s13258-019-00782-1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature20167", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024156938", 
          "https://doi.org/10.1038/nature20167"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2020-04-13", 
    "datePublishedReg": "2020-04-13", 
    "description": "As a natural predator of many insect pests on its native Asian range, Harmonia axyridis remains amongst the insects whose pathogenic or beneficial microorganisms are yet to be studied. The genome nucleotide (nt) and amino acid sequences of open reading frames (ORFs) of the novel RNA virus were identified. Neighbor-joining (NJ) were constructed using MEGA7 software packages with nt sequences and conserved amino acid sequences of predicted RNA-dependent RNA polymerase (RdRp).The complete genome of a novel virus named Harmonia axyridis virus 1 was determined by RNA-seq and rapid amplification of cDNA ends from H. axyridis, which had a single-stranded RNA genome of 8868 nts in length and contains two putative ORFs. ORF1 encodes a polypeptide of 2182 amino acids, which contained conserved domains for 2 picornavirus-like capsid proteins and one RNA helicase. ORF2 encodes a polypeptide of 655 amino acids, which contained 1 RdRp domain. Phylogenetic analysis of whole genome nt sequences and RdRp deduced amino acid sequences suggested that the virus clustered with several unclassified Hubei picorna-like virus. To our knowledge, this is the first full annotated genome of a novel member of the unclassified group of RNA viruses, infecting H. axyridis in natural field conditions.", 
    "genre": "article", 
    "id": "sg:pub.10.1007/s11033-020-05418-2", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1018503", 
        "issn": [
          "0301-4851", 
          "1573-4978"
        ], 
        "name": "Molecular Biology Reports", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "5", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "47"
      }
    ], 
    "keywords": [
      "open reading frame", 
      "amino acid sequence", 
      "acid sequence", 
      "Neighbor-Joining", 
      "H. axyridis", 
      "Harmonia axyridis", 
      "RNA viruses", 
      "putative open reading frames", 
      "RNA-dependent RNA polymerase", 
      "amino acids", 
      "picorna-like viruses", 
      "novel RNA virus", 
      "RNA virus genomes", 
      "native Asian range", 
      "natural field conditions", 
      "RNA helicase", 
      "RdRp domain", 
      "phylogenetic analysis", 
      "Asian range", 
      "beneficial microorganisms", 
      "RNA polymerase", 
      "complete genome", 
      "RNA-seq", 
      "insect pests", 
      "whole genome", 
      "reading frame", 
      "cDNA ends", 
      "nt sequence", 
      "novel member", 
      "natural predators", 
      "rapid amplification", 
      "phylogenetic characterization", 
      "RNA genome", 
      "genome", 
      "axyridis", 
      "capsid protein", 
      "virus genome", 
      "novel virus", 
      "unclassified group", 
      "field conditions", 
      "sequence", 
      "polypeptide", 
      "virus 1", 
      "helicase", 
      "insects", 
      "predators", 
      "virus", 
      "ORF1", 
      "pests", 
      "polymerase", 
      "ORF2", 
      "RdRp", 
      "nucleotides", 
      "domain", 
      "sequencing", 
      "protein", 
      "microorganisms", 
      "acid", 
      "amplification", 
      "members", 
      "characterization", 
      "frame", 
      "length", 
      "analysis", 
      "NT", 
      "knowledge", 
      "conditions", 
      "end", 
      "range", 
      "software package", 
      "group", 
      "package"
    ], 
    "name": "Sequencing and phylogenetic characterization of a novel RNA virus genome from Harmonia axyridis", 
    "pagination": "4015-4019", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1126642935"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s11033-020-05418-2"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "32285328"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s11033-020-05418-2", 
      "https://app.dimensions.ai/details/publication/pub.1126642935"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-12-01T06:41", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20221201/entities/gbq_results/article/article_853.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1007/s11033-020-05418-2"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s11033-020-05418-2'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s11033-020-05418-2'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s11033-020-05418-2'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s11033-020-05418-2'


 

This table displays all metadata directly associated to this object as RDF triples.

262 TRIPLES      21 PREDICATES      118 URIs      100 LITERALS      18 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s11033-020-05418-2 schema:about N07130014dac342608210ae52c9548aba
2 N19247fa9de6f4dbaa304d121266a4caa
3 N509373f65de8479db6f59073549022de
4 N535621b88b3849b5b63e2612acdb195e
5 N66891856849c4d51a4ea69068d37b909
6 N67e0abf6bfb5402d8a6c267322a826b5
7 N6b524a2cdcdf4ca68efe16c566d385c0
8 N941e0dd82fe94f968b81af78c95ccbba
9 N974cf8ea1fbd43aca6604122db6f0521
10 Nd818b0c5e5c94962b9b6ce907ef15967
11 Nefe7c0a83e804e1aa98f47cc54620f1f
12 anzsrc-for:06
13 anzsrc-for:0604
14 schema:author N4706b8c13f5841d5a21de3e621ae5bf8
15 schema:citation sg:pub.10.1007/s00705-016-3195-y
16 sg:pub.10.1007/s00705-017-3622-8
17 sg:pub.10.1007/s10526-011-9379-1
18 sg:pub.10.1007/s10526-016-9764-x
19 sg:pub.10.1007/s10526-016-9766-8
20 sg:pub.10.1007/s13258-019-00782-1
21 sg:pub.10.1038/nature20167
22 sg:pub.10.1038/nbt.1883
23 sg:pub.10.1038/s41586-018-0012-7
24 sg:pub.10.1186/s12985-017-0691-y
25 schema:datePublished 2020-04-13
26 schema:datePublishedReg 2020-04-13
27 schema:description As a natural predator of many insect pests on its native Asian range, Harmonia axyridis remains amongst the insects whose pathogenic or beneficial microorganisms are yet to be studied. The genome nucleotide (nt) and amino acid sequences of open reading frames (ORFs) of the novel RNA virus were identified. Neighbor-joining (NJ) were constructed using MEGA7 software packages with nt sequences and conserved amino acid sequences of predicted RNA-dependent RNA polymerase (RdRp).The complete genome of a novel virus named Harmonia axyridis virus 1 was determined by RNA-seq and rapid amplification of cDNA ends from H. axyridis, which had a single-stranded RNA genome of 8868 nts in length and contains two putative ORFs. ORF1 encodes a polypeptide of 2182 amino acids, which contained conserved domains for 2 picornavirus-like capsid proteins and one RNA helicase. ORF2 encodes a polypeptide of 655 amino acids, which contained 1 RdRp domain. Phylogenetic analysis of whole genome nt sequences and RdRp deduced amino acid sequences suggested that the virus clustered with several unclassified Hubei picorna-like virus. To our knowledge, this is the first full annotated genome of a novel member of the unclassified group of RNA viruses, infecting H. axyridis in natural field conditions.
28 schema:genre article
29 schema:isAccessibleForFree false
30 schema:isPartOf N22eef7f26402435198b64d779ba64807
31 Ne19a9c8b3ee84e398b53104a9cdd684a
32 sg:journal.1018503
33 schema:keywords Asian range
34 H. axyridis
35 Harmonia axyridis
36 NT
37 Neighbor-Joining
38 ORF1
39 ORF2
40 RNA genome
41 RNA helicase
42 RNA polymerase
43 RNA virus genomes
44 RNA viruses
45 RNA-dependent RNA polymerase
46 RNA-seq
47 RdRp
48 RdRp domain
49 acid
50 acid sequence
51 amino acid sequence
52 amino acids
53 amplification
54 analysis
55 axyridis
56 beneficial microorganisms
57 cDNA ends
58 capsid protein
59 characterization
60 complete genome
61 conditions
62 domain
63 end
64 field conditions
65 frame
66 genome
67 group
68 helicase
69 insect pests
70 insects
71 knowledge
72 length
73 members
74 microorganisms
75 native Asian range
76 natural field conditions
77 natural predators
78 novel RNA virus
79 novel member
80 novel virus
81 nt sequence
82 nucleotides
83 open reading frame
84 package
85 pests
86 phylogenetic analysis
87 phylogenetic characterization
88 picorna-like viruses
89 polymerase
90 polypeptide
91 predators
92 protein
93 putative open reading frames
94 range
95 rapid amplification
96 reading frame
97 sequence
98 sequencing
99 software package
100 unclassified group
101 virus
102 virus 1
103 virus genome
104 whole genome
105 schema:name Sequencing and phylogenetic characterization of a novel RNA virus genome from Harmonia axyridis
106 schema:pagination 4015-4019
107 schema:productId N5cb2684d467242bf814ce65217f02cc4
108 Nd3f1b74848c249ab979f59219c4245f2
109 Ne3f6b7e0ea2344c2bbd9a1f30c30f02b
110 schema:sameAs https://app.dimensions.ai/details/publication/pub.1126642935
111 https://doi.org/10.1007/s11033-020-05418-2
112 schema:sdDatePublished 2022-12-01T06:41
113 schema:sdLicense https://scigraph.springernature.com/explorer/license/
114 schema:sdPublisher N27893559c7674ab0b4c199917a97555c
115 schema:url https://doi.org/10.1007/s11033-020-05418-2
116 sgo:license sg:explorer/license/
117 sgo:sdDataset articles
118 rdf:type schema:ScholarlyArticle
119 N0415e83362f8447ab06448b037503507 rdf:first N8d7861f91c524d6f97ee3970b7e26efb
120 rdf:rest Nd902ff374eeb4df094f7cc028901634a
121 N07130014dac342608210ae52c9548aba schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
122 schema:name Phylogeny
123 rdf:type schema:DefinedTerm
124 N19247fa9de6f4dbaa304d121266a4caa schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
125 schema:name Coleoptera
126 rdf:type schema:DefinedTerm
127 N22eef7f26402435198b64d779ba64807 schema:issueNumber 5
128 rdf:type schema:PublicationIssue
129 N249f4d764bbd4d24bafd97c8658385b6 schema:affiliation grid-institutes:None
130 schema:familyName Jiang
131 schema:givenName Lianqiang
132 rdf:type schema:Person
133 N27893559c7674ab0b4c199917a97555c schema:name Springer Nature - SN SciGraph project
134 rdf:type schema:Organization
135 N4706b8c13f5841d5a21de3e621ae5bf8 rdf:first sg:person.07757276711.77
136 rdf:rest Na2f84f8742364d0190af7fa088237faa
137 N509373f65de8479db6f59073549022de schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
138 schema:name Whole Genome Sequencing
139 rdf:type schema:DefinedTerm
140 N535621b88b3849b5b63e2612acdb195e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
141 schema:name Animals
142 rdf:type schema:DefinedTerm
143 N5cb2684d467242bf814ce65217f02cc4 schema:name pubmed_id
144 schema:value 32285328
145 rdf:type schema:PropertyValue
146 N64fad4bd99794b5d9965982e44173fe9 schema:affiliation grid-institutes:None
147 schema:familyName Feng
148 schema:givenName Changchun
149 rdf:type schema:Person
150 N66891856849c4d51a4ea69068d37b909 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
151 schema:name Amino Acid Sequence
152 rdf:type schema:DefinedTerm
153 N67e0abf6bfb5402d8a6c267322a826b5 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
154 schema:name Genome, Viral
155 rdf:type schema:DefinedTerm
156 N6b524a2cdcdf4ca68efe16c566d385c0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
157 schema:name Open Reading Frames
158 rdf:type schema:DefinedTerm
159 N6ec38d2709704c88add7237fe2500653 rdf:first sg:person.0612760625.11
160 rdf:rest rdf:nil
161 N8ac3946240f4422eacfcd7e1e81a3391 rdf:first N64fad4bd99794b5d9965982e44173fe9
162 rdf:rest N0415e83362f8447ab06448b037503507
163 N8d7861f91c524d6f97ee3970b7e26efb schema:affiliation grid-institutes:None
164 schema:familyName Liu
165 schema:givenName Dongyang
166 rdf:type schema:Person
167 N941e0dd82fe94f968b81af78c95ccbba schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
168 schema:name RNA, Viral
169 rdf:type schema:DefinedTerm
170 N974cf8ea1fbd43aca6604122db6f0521 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
171 schema:name Base Sequence
172 rdf:type schema:DefinedTerm
173 Na1ade73a21e04e478a9f3a9771322445 rdf:first N249f4d764bbd4d24bafd97c8658385b6
174 rdf:rest N8ac3946240f4422eacfcd7e1e81a3391
175 Na2f84f8742364d0190af7fa088237faa rdf:first sg:person.0651670737.25
176 rdf:rest Na1ade73a21e04e478a9f3a9771322445
177 Nd3f1b74848c249ab979f59219c4245f2 schema:name dimensions_id
178 schema:value pub.1126642935
179 rdf:type schema:PropertyValue
180 Nd818b0c5e5c94962b9b6ce907ef15967 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
181 schema:name Viral Proteins
182 rdf:type schema:DefinedTerm
183 Nd902ff374eeb4df094f7cc028901634a rdf:first sg:person.012332074442.02
184 rdf:rest N6ec38d2709704c88add7237fe2500653
185 Ne19a9c8b3ee84e398b53104a9cdd684a schema:volumeNumber 47
186 rdf:type schema:PublicationVolume
187 Ne3f6b7e0ea2344c2bbd9a1f30c30f02b schema:name doi
188 schema:value 10.1007/s11033-020-05418-2
189 rdf:type schema:PropertyValue
190 Nefe7c0a83e804e1aa98f47cc54620f1f schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
191 schema:name RNA Viruses
192 rdf:type schema:DefinedTerm
193 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
194 schema:name Biological Sciences
195 rdf:type schema:DefinedTerm
196 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
197 schema:name Genetics
198 rdf:type schema:DefinedTerm
199 sg:journal.1018503 schema:issn 0301-4851
200 1573-4978
201 schema:name Molecular Biology Reports
202 schema:publisher Springer Nature
203 rdf:type schema:Periodical
204 sg:person.012332074442.02 schema:affiliation grid-institutes:grid.440622.6
205 schema:familyName Liu
206 schema:givenName Yongjie
207 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012332074442.02
208 rdf:type schema:Person
209 sg:person.0612760625.11 schema:affiliation grid-institutes:grid.464493.8
210 schema:familyName Xu
211 schema:givenName Pengjun
212 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0612760625.11
213 rdf:type schema:Person
214 sg:person.0651670737.25 schema:affiliation grid-institutes:grid.464493.8
215 schema:familyName Ren
216 schema:givenName Guangwei
217 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0651670737.25
218 rdf:type schema:Person
219 sg:person.07757276711.77 schema:affiliation grid-institutes:grid.464493.8
220 schema:familyName Liu
221 schema:givenName Yingjie
222 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.07757276711.77
223 rdf:type schema:Person
224 sg:pub.10.1007/s00705-016-3195-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1051995045
225 https://doi.org/10.1007/s00705-016-3195-y
226 rdf:type schema:CreativeWork
227 sg:pub.10.1007/s00705-017-3622-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1092515404
228 https://doi.org/10.1007/s00705-017-3622-8
229 rdf:type schema:CreativeWork
230 sg:pub.10.1007/s10526-011-9379-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006355742
231 https://doi.org/10.1007/s10526-011-9379-1
232 rdf:type schema:CreativeWork
233 sg:pub.10.1007/s10526-016-9764-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1001810699
234 https://doi.org/10.1007/s10526-016-9764-x
235 rdf:type schema:CreativeWork
236 sg:pub.10.1007/s10526-016-9766-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040189584
237 https://doi.org/10.1007/s10526-016-9766-8
238 rdf:type schema:CreativeWork
239 sg:pub.10.1007/s13258-019-00782-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1111442838
240 https://doi.org/10.1007/s13258-019-00782-1
241 rdf:type schema:CreativeWork
242 sg:pub.10.1038/nature20167 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024156938
243 https://doi.org/10.1038/nature20167
244 rdf:type schema:CreativeWork
245 sg:pub.10.1038/nbt.1883 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015803168
246 https://doi.org/10.1038/nbt.1883
247 rdf:type schema:CreativeWork
248 sg:pub.10.1038/s41586-018-0012-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1101862110
249 https://doi.org/10.1038/s41586-018-0012-7
250 rdf:type schema:CreativeWork
251 sg:pub.10.1186/s12985-017-0691-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1083720043
252 https://doi.org/10.1186/s12985-017-0691-y
253 rdf:type schema:CreativeWork
254 grid-institutes:None schema:alternateName Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China
255 schema:name Liangshan Branch of Sichuan Provincial Tobacco Company, Technical Center, 615000, Xichang, China
256 rdf:type schema:Organization
257 grid-institutes:grid.440622.6 schema:alternateName College of Plant Protection, Shandong Agricultural University, 271018, Taian, China
258 schema:name College of Plant Protection, Shandong Agricultural University, 271018, Taian, China
259 rdf:type schema:Organization
260 grid-institutes:grid.464493.8 schema:alternateName Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China
261 schema:name Key Laboratory of Tobacco Pest Monitoring Controlling & Integrated Management, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, 266101, Qingdao, China
262 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...