Developments of functional markers for Fom-2-mediated fusarium wilt resistance based on single nucleotide polymorphism in melon (Cucumis melo L.) View Full Text


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Article Info

DATE

2010-04-16

AUTHORS

Shiwei Wang, Jinghua Yang, Mingfang Zhang

ABSTRACT

Three single nucleotide polymorphism (SNP) sites in which amino acids had changed were detected by sequence analysis within the leucine-rich repeat (LRR) region of the Fom-2 gene. Cleaved amplified polymorphic sequence (CAPS) and allele-specific PCR (AS-PCR) methods were employed to explore the SNP validation linked to fusarium wilt resistance in the F1 and F2 generations simultaneously. Homozygous- and heterozygous-resistant genotypes and homozygous-susceptible genotype could be clearly distinguished using the CAPS method, and three detected SNP sites were observed to be linked to fusarium wilt resistance, with a segregation ratio of 1:2:1 in the F2 generation. In addition, heterozygous-resistant and homozygous-susceptible genotypes could be clearly distinguished in the F1 generation using the AS-PCR method, showing a 3:1 segregation in terms of resistant and susceptible genotypes in the F2 generation. We therefore developed SNP-based functional markers (FMs) and identified some melon germplasm resistant to fusarium wilt by FM analysis within melon species. In conclusion, the SNP-based FMs originating from the SNP site of the Fom-2 LRR region were determined to be linked to fusarium wilt resistance and showed promise in the enhancement of breeding in melon. More... »

PAGES

385-393

References to SciGraph publications

  • 2005-05-10. Genomic cloning and linkage mapping of the Mal d 1 (PR-10) gene family in apple (Malus domestica) in THEORETICAL AND APPLIED GENETICS
  • 2005-01-13. Linkage map positions and allelic diversity of two Mal d 3 (non-specific lipid transfer protein) genes in the cultivated apple (Malus domestica) in THEORETICAL AND APPLIED GENETICS
  • 2008-05-15. Functional markers in wheat: technical and economic aspects in MOLECULAR BREEDING
  • 1999-08. Development and utility of cleaved amplified polymorphic sequences (CAPS) and restriction fragment length polymorphisms (RFLPs) linked to the Fom-2 fusarium wilt resistance gene in melon (Cucumis melo L.) in THEORETICAL AND APPLIED GENETICS
  • 2007-09-19. Identification, validation and survey of a single nucleotide polymorphism (SNP) associated with pungency in Capsicum spp. in THEORETICAL AND APPLIED GENETICS
  • 2003-05. Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana in NATURE
  • 2000-10. Molecular mapping of the Rph7.g leaf rust resistance gene in barley (Hordeum vulgare L.) in THEORETICAL AND APPLIED GENETICS
  • 2000-08. Genetic mapping of a fusarium wilt resistance gene (Fom-2) in melon (Cucumis melo L.) in MOLECULAR BREEDING
  • 1999-08. Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis in NATURE
  • 2007-02-28. Development of a codominant CAPS marker for allelic selection between canary yellow and red watermelon based on SNP in lycopene β-cyclase (LCYB) gene in MOLECULAR BREEDING
  • 2005-12-01. Allele-specific CAPS markers based on point mutations in resistance alleles at the pvr1 locus encoding eIF4E in Capsicum in THEORETICAL AND APPLIED GENETICS
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    http://scigraph.springernature.com/pub.10.1007/s11032-010-9439-8

    DOI

    http://dx.doi.org/10.1007/s11032-010-9439-8

    DIMENSIONS

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    176 schema:name Key Laboratory of Horticultural Plant Growth, Development & Quality Improvement, Ministry of Agriculture, 310029, Hangzhou, People’s Republic of China
    177 Laboratory of Genetic Resources & Functional Improvement for Horticultural Plants, Department of Horticulture, Zhejiang University, 310029, Hangzhou, People’s Republic of China
    178 rdf:type schema:Organization
     




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