Ontology type: schema:ScholarlyArticle Open Access: True
2011-01
AUTHORSXiao-Qi Zhang, Chengdao Li, Joe Panozzo, Sharon Westcott, Guoping Zhang, Amy Tay, Rudi Appels, Mike Jones, Reg Lance
ABSTRACTThe terminal region of barley chromosome 5HL controls malt extract, diastatic power, free amino acid nitrogen, alpha-amylase activity, seed dormancy and pre-harvest sprouting. Comparative analysis of the barley and rice maps has established that the terminal region of barley chromosome 5HL is syntenic to rice chromosome 3L near the telomere end. The rice BAC (Bacterial Artificial Chromosome) sequences covering the region of chromosome 3L were used to search barley expressed sequenced tags database. Thirty-three genes were amplified by PCR (polymerase chain reaction) with the primers designed from barley ESTs (expressed sequence tag). Comparison of the sequences of the PCR generated DNA fragments revealed polymorphisms including single nucleotide polymorphism (SNP), insertions or deletions between the barley varieties. Seven new PCR based molecular markers were developed and mapped within 10 cM in three doubled haploid barley populations (Stirling × Harrington, Baudin × AC Metcalfe and Chebec × Harrington). The mapped genes maintain the micro-syntenic relationship between barley and rice. These gene specific markers provide simple and efficient tools for germplasm characterization and marker-assisted selection for barley malting quality, and ultimately lead to isolation and identification of the major gene(s) controlling multiple quality traits on barley chromosome 5HL. More... »
PAGES1-9
http://scigraph.springernature.com/pub.10.1007/s11032-010-9408-2
DOIhttp://dx.doi.org/10.1007/s11032-010-9408-2
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1033206654
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Genetics",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"State Agricultural Biotechnology Center, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Zhang",
"givenName": "Xiao-Qi",
"id": "sg:person.01240214246.32",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01240214246.32"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Department of Agriculture and Food Western Australia",
"id": "https://www.grid.ac/institutes/grid.417914.e",
"name": [
"State Agricultural Biotechnology Center, Murdoch University, 6150, Perth, WA, Australia",
"Department of Agriculture and Food, Western Australia, 3 Baron-Hay Court, 6151, South Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Li",
"givenName": "Chengdao",
"id": "sg:person.0631036546.40",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0631036546.40"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Primary Industry, DPI Horsham Centre, 110 Natimuk Road, 3400, Horsham, VIC, Australia"
],
"type": "Organization"
},
"familyName": "Panozzo",
"givenName": "Joe",
"id": "sg:person.01163456040.16",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01163456040.16"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Department of Agriculture and Food Western Australia",
"id": "https://www.grid.ac/institutes/grid.417914.e",
"name": [
"Department of Agriculture and Food, Western Australia, 3 Baron-Hay Court, 6151, South Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Westcott",
"givenName": "Sharon",
"id": "sg:person.0671430513.99",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0671430513.99"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Zhejiang University",
"id": "https://www.grid.ac/institutes/grid.13402.34",
"name": [
"Department of Agronomy, Zhejiang University, Hangzhou, China"
],
"type": "Organization"
},
"familyName": "Zhang",
"givenName": "Guoping",
"id": "sg:person.01007544573.49",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01007544573.49"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Department of Agriculture and Food Western Australia",
"id": "https://www.grid.ac/institutes/grid.417914.e",
"name": [
"Department of Agriculture and Food, Western Australia, 3 Baron-Hay Court, 6151, South Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Tay",
"givenName": "Amy",
"id": "sg:person.012476305450.93",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012476305450.93"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"Centre of Comparative Genomics, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Appels",
"givenName": "Rudi",
"id": "sg:person.01117454167.49",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01117454167.49"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"State Agricultural Biotechnology Center, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Jones",
"givenName": "Mike",
"id": "sg:person.016427007024.24",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Department of Agriculture and Food Western Australia",
"id": "https://www.grid.ac/institutes/grid.417914.e",
"name": [
"Department of Agriculture and Food, Western Australia, 3 Baron-Hay Court, 6151, South Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Lance",
"givenName": "Reg",
"id": "sg:person.01005657113.10",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01005657113.10"
],
"type": "Person"
}
],
"citation": [
{
"id": "https://doi.org/10.1071/ar02210",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002241574"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01184929",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002917299",
"https://doi.org/10.1007/bf01184929"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01184929",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002917299",
"https://doi.org/10.1007/bf01184929"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar02194",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1003506255"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1186/1471-2164-9-80",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010363721",
"https://doi.org/10.1186/1471-2164-9-80"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0168-7972(03)80012-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010957107"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar02237",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011576706"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar02201",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013991845"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-004-1847-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1015051705",
"https://doi.org/10.1007/s00122-004-1847-x"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s001220051466",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1016195282",
"https://doi.org/10.1007/s001220051466"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s001220051466",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1016195282",
"https://doi.org/10.1007/s001220051466"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1469-1809.1943.tb02321.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020384561"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/978-3-642-01279-2_9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020906229",
"https://doi.org/10.1007/978-3-642-01279-2_9"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar07345",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025898775"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s11032-008-9169-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026634783",
"https://doi.org/10.1007/s11032-008-9169-3"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar06203",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027853481"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00335-001-1016-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1032730610",
"https://doi.org/10.1007/s00335-001-1016-3"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00222956",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035303301",
"https://doi.org/10.1007/bf00222956"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/bib/bbm039",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035920515"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s11032-008-9227-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044529552",
"https://doi.org/10.1007/s11032-008-9227-x"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-008-0787-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047494444",
"https://doi.org/10.1007/s00122-008-0787-2"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ar02215",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1049398008"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s10142-004-0104-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051728052",
"https://doi.org/10.1007/s10142-004-0104-3"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-005-0097-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051796889",
"https://doi.org/10.1007/s00122-005-0097-x"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-005-0097-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051796889",
"https://doi.org/10.1007/s00122-005-0097-x"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-003-1281-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1053708526",
"https://doi.org/10.1007/s00122-003-1281-5"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-003-1281-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1053708526",
"https://doi.org/10.1007/s00122-003-1281-5"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.2135/cropsci1997.0011183x003700020039x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1069025412"
],
"type": "CreativeWork"
}
],
"datePublished": "2011-01",
"datePublishedReg": "2011-01-01",
"description": "The terminal region of barley chromosome 5HL controls malt extract, diastatic power, free amino acid nitrogen, alpha-amylase activity, seed dormancy and pre-harvest sprouting. Comparative analysis of the barley and rice maps has established that the terminal region of barley chromosome 5HL is syntenic to rice chromosome 3L near the telomere end. The rice BAC (Bacterial Artificial Chromosome) sequences covering the region of chromosome 3L were used to search barley expressed sequenced tags database. Thirty-three genes were amplified by PCR (polymerase chain reaction) with the primers designed from barley ESTs (expressed sequence tag). Comparison of the sequences of the PCR generated DNA fragments revealed polymorphisms including single nucleotide polymorphism (SNP), insertions or deletions between the barley varieties. Seven new PCR based molecular markers were developed and mapped within 10 cM in three doubled haploid barley populations (Stirling \u00d7 Harrington, Baudin \u00d7 AC Metcalfe and Chebec \u00d7 Harrington). The mapped genes maintain the micro-syntenic relationship between barley and rice. These gene specific markers provide simple and efficient tools for germplasm characterization and marker-assisted selection for barley malting quality, and ultimately lead to isolation and identification of the major gene(s) controlling multiple quality traits on barley chromosome 5HL.",
"genre": "research_article",
"id": "sg:pub.10.1007/s11032-010-9408-2",
"inLanguage": [
"en"
],
"isAccessibleForFree": true,
"isPartOf": [
{
"id": "sg:journal.1114043",
"issn": [
"1380-3743",
"1572-9788"
],
"name": "Molecular Breeding",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "27"
}
],
"name": "Dissecting the telomere region of barley chromosome 5HL using rice genomic sequences as references: new markers for tracking a complex region in breeding",
"pagination": "1-9",
"productId": [
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"9e31137c8852eb18a4b65d4873dde826aca79561ff05c411794535d4a8431b51"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1007/s11032-010-9408-2"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1033206654"
]
}
],
"sameAs": [
"https://doi.org/10.1007/s11032-010-9408-2",
"https://app.dimensions.ai/details/publication/pub.1033206654"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-11T10:01",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000347_0000000347/records_89819_00000001.jsonl",
"type": "ScholarlyArticle",
"url": "http://link.springer.com/10.1007%2Fs11032-010-9408-2"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s11032-010-9408-2'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s11032-010-9408-2'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s11032-010-9408-2'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s11032-010-9408-2'
This table displays all metadata directly associated to this object as RDF triples.
212 TRIPLES
21 PREDICATES
51 URIs
19 LITERALS
7 BLANK NODES