Muscle contraction mechanism based on single molecule measurements View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-12-01

AUTHORS

Toshio Yanagida, Yoshiharu Ishii

ABSTRACT

Single molecule measurements have shown that a muscle myosin step is driven by biased Brownian movement. Furthermore, they have also demonstrated that in response to strain in the backward direction a detached myosin head preferentially attaches to the forward direction due to an accelerated transition from a weak binding to strong binding state. Because they are consistent with the original Huxley model for muscle contraction, we have built a model that describes macroscopic muscle characteristics based on these single molecule results. More... »

PAGES

395-402

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10974-012-9332-7

DOI

http://dx.doi.org/10.1007/s10974-012-9332-7

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1025708379

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23203295


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biochemistry and Cell Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0606", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Physiology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Microscopy, Scanning Probe", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Models, Molecular", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Muscle Contraction", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Myosins", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Quantitative Biology Center, RIKEN, Suita, Osaka, Japan", 
          "id": "http://www.grid.ac/institutes/grid.7597.c", 
          "name": [
            "Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan", 
            "Center for Information and Neural Network, Suita, Osaka, Japan", 
            "Quantitative Biology Center, RIKEN, Suita, Osaka, Japan"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Yanagida", 
        "givenName": "Toshio", 
        "id": "sg:person.015141357621.93", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015141357621.93"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan", 
          "id": "http://www.grid.ac/institutes/grid.136593.b", 
          "name": [
            "Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ishii", 
        "givenName": "Yoshiharu", 
        "id": "sg:person.01220026401.88", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220026401.88"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1038/16403", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000451350", 
          "https://doi.org/10.1038/16403"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/415659a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051017618", 
          "https://doi.org/10.1038/415659a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/23072", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028089112", 
          "https://doi.org/10.1038/23072"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nsmb1206", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034710036", 
          "https://doi.org/10.1038/nsmb1206"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/374555a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006208507", 
          "https://doi.org/10.1038/374555a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/84962", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001068571", 
          "https://doi.org/10.1038/84962"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/233533a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050599860", 
          "https://doi.org/10.1038/233533a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/378209a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031755821", 
          "https://doi.org/10.1038/378209a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nchembio.171", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025715638", 
          "https://doi.org/10.1038/nchembio.171"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/334074a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050990343", 
          "https://doi.org/10.1038/334074a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature01529", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003160992", 
          "https://doi.org/10.1038/nature01529"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/368113a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049237121", 
          "https://doi.org/10.1038/368113a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/370446a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053083014", 
          "https://doi.org/10.1038/370446a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature09450", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030990737", 
          "https://doi.org/10.1038/nature09450"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-12-01", 
    "datePublishedReg": "2012-12-01", 
    "description": "Single molecule measurements have shown that a muscle myosin step is driven by biased Brownian movement. Furthermore, they have also demonstrated that in response to strain in the backward direction a detached myosin head preferentially attaches to the forward direction due to an accelerated transition from a weak binding to strong binding state. Because they are consistent with the original Huxley model for muscle contraction, we have built a model that describes macroscopic muscle characteristics based on these single molecule results.", 
    "genre": "article", 
    "id": "sg:pub.10.1007/s10974-012-9332-7", 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1091334", 
        "issn": [
          "0142-4319", 
          "1573-2657"
        ], 
        "name": "Journal of Muscle Research and Cell Motility", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "6", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "33"
      }
    ], 
    "keywords": [
      "muscle contraction", 
      "biased Brownian movement", 
      "muscle characteristics", 
      "muscle contraction mechanism", 
      "detached myosin heads", 
      "contraction mechanism", 
      "contraction", 
      "head", 
      "accelerated transition", 
      "response", 
      "binding", 
      "myosin heads", 
      "Huxley model", 
      "mechanism", 
      "weak binding", 
      "measurements", 
      "movement", 
      "model", 
      "results", 
      "molecules results", 
      "characteristics", 
      "state", 
      "step", 
      "direction", 
      "molecule measurements", 
      "transition", 
      "backward direction", 
      "single-molecule results", 
      "Brownian movement", 
      "forward direction", 
      "single-molecule measurements"
    ], 
    "name": "Muscle contraction mechanism based on single molecule measurements", 
    "pagination": "395-402", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1025708379"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s10974-012-9332-7"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "23203295"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s10974-012-9332-7", 
      "https://app.dimensions.ai/details/publication/pub.1025708379"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-09-02T15:57", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20220902/entities/gbq_results/article/article_580.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1007/s10974-012-9332-7"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10974-012-9332-7'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10974-012-9332-7'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10974-012-9332-7'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10974-012-9332-7'


 

This table displays all metadata directly associated to this object as RDF triples.

180 TRIPLES      21 PREDICATES      75 URIs      52 LITERALS      11 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s10974-012-9332-7 schema:about N026a743ee1c34213b7fc60a829f045d1
2 N56b8ccf4347145a79aca0e221fb9f958
3 N736ec30fe1d04a0c89b2bfcc42423995
4 Nb7383ddd6f884078ad06b8b905141434
5 anzsrc-for:06
6 anzsrc-for:0601
7 anzsrc-for:0606
8 schema:author N582ffdeb84124d89a5e7c042eae3769f
9 schema:citation sg:pub.10.1038/16403
10 sg:pub.10.1038/23072
11 sg:pub.10.1038/233533a0
12 sg:pub.10.1038/334074a0
13 sg:pub.10.1038/368113a0
14 sg:pub.10.1038/370446a0
15 sg:pub.10.1038/374555a0
16 sg:pub.10.1038/378209a0
17 sg:pub.10.1038/415659a
18 sg:pub.10.1038/84962
19 sg:pub.10.1038/nature01529
20 sg:pub.10.1038/nature09450
21 sg:pub.10.1038/nchembio.171
22 sg:pub.10.1038/nsmb1206
23 schema:datePublished 2012-12-01
24 schema:datePublishedReg 2012-12-01
25 schema:description Single molecule measurements have shown that a muscle myosin step is driven by biased Brownian movement. Furthermore, they have also demonstrated that in response to strain in the backward direction a detached myosin head preferentially attaches to the forward direction due to an accelerated transition from a weak binding to strong binding state. Because they are consistent with the original Huxley model for muscle contraction, we have built a model that describes macroscopic muscle characteristics based on these single molecule results.
26 schema:genre article
27 schema:isAccessibleForFree true
28 schema:isPartOf N41e7f000d0f64157988897b0ee9d2851
29 N44500a4a09174c198713f718b596c658
30 sg:journal.1091334
31 schema:keywords Brownian movement
32 Huxley model
33 accelerated transition
34 backward direction
35 biased Brownian movement
36 binding
37 characteristics
38 contraction
39 contraction mechanism
40 detached myosin heads
41 direction
42 forward direction
43 head
44 measurements
45 mechanism
46 model
47 molecule measurements
48 molecules results
49 movement
50 muscle characteristics
51 muscle contraction
52 muscle contraction mechanism
53 myosin heads
54 response
55 results
56 single-molecule measurements
57 single-molecule results
58 state
59 step
60 transition
61 weak binding
62 schema:name Muscle contraction mechanism based on single molecule measurements
63 schema:pagination 395-402
64 schema:productId N039dddbb06b24c898d3b0f760ec1b964
65 N0bf1ca8ce0654748aa7c609bb6232bfe
66 N30201a1b131944f8a5c439596a5ef05b
67 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025708379
68 https://doi.org/10.1007/s10974-012-9332-7
69 schema:sdDatePublished 2022-09-02T15:57
70 schema:sdLicense https://scigraph.springernature.com/explorer/license/
71 schema:sdPublisher N5288bd187266473c923de26ee2dde40a
72 schema:url https://doi.org/10.1007/s10974-012-9332-7
73 sgo:license sg:explorer/license/
74 sgo:sdDataset articles
75 rdf:type schema:ScholarlyArticle
76 N026a743ee1c34213b7fc60a829f045d1 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
77 schema:name Models, Molecular
78 rdf:type schema:DefinedTerm
79 N039dddbb06b24c898d3b0f760ec1b964 schema:name pubmed_id
80 schema:value 23203295
81 rdf:type schema:PropertyValue
82 N0bf1ca8ce0654748aa7c609bb6232bfe schema:name doi
83 schema:value 10.1007/s10974-012-9332-7
84 rdf:type schema:PropertyValue
85 N30201a1b131944f8a5c439596a5ef05b schema:name dimensions_id
86 schema:value pub.1025708379
87 rdf:type schema:PropertyValue
88 N41e7f000d0f64157988897b0ee9d2851 schema:volumeNumber 33
89 rdf:type schema:PublicationVolume
90 N44500a4a09174c198713f718b596c658 schema:issueNumber 6
91 rdf:type schema:PublicationIssue
92 N5288bd187266473c923de26ee2dde40a schema:name Springer Nature - SN SciGraph project
93 rdf:type schema:Organization
94 N56b8ccf4347145a79aca0e221fb9f958 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
95 schema:name Muscle Contraction
96 rdf:type schema:DefinedTerm
97 N582ffdeb84124d89a5e7c042eae3769f rdf:first sg:person.015141357621.93
98 rdf:rest Nfd7e34d54fb041d08cc792d6473986a8
99 N736ec30fe1d04a0c89b2bfcc42423995 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
100 schema:name Microscopy, Scanning Probe
101 rdf:type schema:DefinedTerm
102 Nb7383ddd6f884078ad06b8b905141434 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
103 schema:name Myosins
104 rdf:type schema:DefinedTerm
105 Nfd7e34d54fb041d08cc792d6473986a8 rdf:first sg:person.01220026401.88
106 rdf:rest rdf:nil
107 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
108 schema:name Biological Sciences
109 rdf:type schema:DefinedTerm
110 anzsrc-for:0601 schema:inDefinedTermSet anzsrc-for:
111 schema:name Biochemistry and Cell Biology
112 rdf:type schema:DefinedTerm
113 anzsrc-for:0606 schema:inDefinedTermSet anzsrc-for:
114 schema:name Physiology
115 rdf:type schema:DefinedTerm
116 sg:journal.1091334 schema:issn 0142-4319
117 1573-2657
118 schema:name Journal of Muscle Research and Cell Motility
119 schema:publisher Springer Nature
120 rdf:type schema:Periodical
121 sg:person.01220026401.88 schema:affiliation grid-institutes:grid.136593.b
122 schema:familyName Ishii
123 schema:givenName Yoshiharu
124 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220026401.88
125 rdf:type schema:Person
126 sg:person.015141357621.93 schema:affiliation grid-institutes:grid.7597.c
127 schema:familyName Yanagida
128 schema:givenName Toshio
129 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015141357621.93
130 rdf:type schema:Person
131 sg:pub.10.1038/16403 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000451350
132 https://doi.org/10.1038/16403
133 rdf:type schema:CreativeWork
134 sg:pub.10.1038/23072 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028089112
135 https://doi.org/10.1038/23072
136 rdf:type schema:CreativeWork
137 sg:pub.10.1038/233533a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050599860
138 https://doi.org/10.1038/233533a0
139 rdf:type schema:CreativeWork
140 sg:pub.10.1038/334074a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050990343
141 https://doi.org/10.1038/334074a0
142 rdf:type schema:CreativeWork
143 sg:pub.10.1038/368113a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049237121
144 https://doi.org/10.1038/368113a0
145 rdf:type schema:CreativeWork
146 sg:pub.10.1038/370446a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053083014
147 https://doi.org/10.1038/370446a0
148 rdf:type schema:CreativeWork
149 sg:pub.10.1038/374555a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006208507
150 https://doi.org/10.1038/374555a0
151 rdf:type schema:CreativeWork
152 sg:pub.10.1038/378209a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031755821
153 https://doi.org/10.1038/378209a0
154 rdf:type schema:CreativeWork
155 sg:pub.10.1038/415659a schema:sameAs https://app.dimensions.ai/details/publication/pub.1051017618
156 https://doi.org/10.1038/415659a
157 rdf:type schema:CreativeWork
158 sg:pub.10.1038/84962 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001068571
159 https://doi.org/10.1038/84962
160 rdf:type schema:CreativeWork
161 sg:pub.10.1038/nature01529 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003160992
162 https://doi.org/10.1038/nature01529
163 rdf:type schema:CreativeWork
164 sg:pub.10.1038/nature09450 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030990737
165 https://doi.org/10.1038/nature09450
166 rdf:type schema:CreativeWork
167 sg:pub.10.1038/nchembio.171 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025715638
168 https://doi.org/10.1038/nchembio.171
169 rdf:type schema:CreativeWork
170 sg:pub.10.1038/nsmb1206 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034710036
171 https://doi.org/10.1038/nsmb1206
172 rdf:type schema:CreativeWork
173 grid-institutes:grid.136593.b schema:alternateName Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan
174 schema:name Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan
175 rdf:type schema:Organization
176 grid-institutes:grid.7597.c schema:alternateName Quantitative Biology Center, RIKEN, Suita, Osaka, Japan
177 schema:name Center for Information and Neural Network, Suita, Osaka, Japan
178 Graduate School of Frontier Biosciences, Osaka University, 6-2-3 Furuedai, 565-0874, Suita, Osaka, Japan
179 Quantitative Biology Center, RIKEN, Suita, Osaka, Japan
180 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...