High-throughput crystallization-to-structure pipeline at RIKEN SPring-8 Center View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2008-12

AUTHORS

Michihiro Sugahara, Yukuhiko Asada, Katsumi Shimizu, Hitoshi Yamamoto, Neratur K. Lokanath, Hisashi Mizutani, Bagautdin Bagautdinov, Yoshinori Matsuura, Midori Taketa, Yuichi Kageyama, Naoko Ono, Yuko Morikawa, Yukiko Tanaka, Hiroki Shimada, Takanobu Nakamoto, Mitsuaki Sugahara, Masaki Yamamoto, Naoki Kunishima

ABSTRACT

A high-throughput crystallization-to-structure pipeline for structural genomics was recently developed at the Advanced Protein Crystallography Research Group of the RIKEN SPring-8 Center in Japan. The structure determination pipeline includes three newly developed technologies for automating X-ray protein crystallography: the automated crystallization and observation robot system "TERA", the SPring-8 Precise Automatic Cryosample Exchanger "SPACE" for automated data collection, and the Package of Expert Researcher's Operation Network "PERON" for automated crystallographic computation from phasing to model checking. During the 5 years following April, 2002, this pipeline was used by seven researchers to determine 138 independent crystal structures (resulting from 437 purified proteins, 234 cryoloop-mountable crystals, and 175 diffraction data sets). The protocols used in the high-throughput pipeline are described in this paper. More... »

PAGES

21

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10969-008-9042-y

DOI

http://dx.doi.org/10.1007/s10969-008-9042-y

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1020257859

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/18677553


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