On the chemical synthesis of new topological structures View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-01

AUTHORS

Nils A. Baas, Nadrian C. Seeman

ABSTRACT

The construction of chemical species with topological properties is an area of increasing interest. Numerous such structures have been synthesized in recent years, particularly from DNA, which is a natural synthon for these molecules. Recently, higher-order topological structures have been introduced. These hyper-structures consist of combinations of simple structures, such as a Brunnian Link of Brunnian Links or a Hopf Ring of Hopf Rings, or combinations thereof. In this article, we discuss the possibilities of constructing these hyper-structures with real molecules, particularly emphasizing the tools that result from the double helical structure of DNA. More... »

PAGES

220-232

References to SciGraph publications

  • 1994-12. On Borromean links in JOURNAL OF MATHEMATICAL CHEMISTRY
  • 1992-09. The design of single-stranded nucleic acid knots in MOLECULAR ENGINEERING
  • 2000-08. A DNA-fuelled molecular machine made of DNA in NATURE
  • 2009-11. New structures in complex systems in THE EUROPEAN PHYSICAL JOURNAL SPECIAL TOPICS
  • 2005. Molecular Knots in TEMPLATES IN CHEMISTRY II
  • 1997-03. Assembly of Borromean rings from DNA in NATURE
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s10910-011-9907-3

    DOI

    http://dx.doi.org/10.1007/s10910-011-9907-3

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1038386249

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/22544990


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "about": [
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0905", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Civil Engineering", 
            "type": "DefinedTerm"
          }, 
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/09", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Engineering", 
            "type": "DefinedTerm"
          }
        ], 
        "author": [
          {
            "affiliation": {
              "alternateName": "Norwegian University of Science and Technology", 
              "id": "https://www.grid.ac/institutes/grid.5947.f", 
              "name": [
                "Department of Mathematical Sciences, NTNU, 7491, Trondheim, Norway"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Baas", 
            "givenName": "Nils A.", 
            "id": "sg:person.010704501247.17", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010704501247.17"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "New York University", 
              "id": "https://www.grid.ac/institutes/grid.137628.9", 
              "name": [
                "Department of Chemistry, New York University, 10003, New York, NY, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Seeman", 
            "givenName": "Nadrian C.", 
            "id": "sg:person.01155412761.86", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01155412761.86"
            ], 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "sg:pub.10.1038/386137b0", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1002822779", 
              "https://doi.org/10.1038/386137b0"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1039/b819333a", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1011784637"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1039/b819333a", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1011784637"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/anie.201007685", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1018199848"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1140/epjst/e2010-01180-8", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1018300841", 
              "https://doi.org/10.1140/epjst/e2010-01180-8"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01169193", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1027997324", 
              "https://doi.org/10.1007/bf01169193"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01169193", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1027997324", 
              "https://doi.org/10.1007/bf01169193"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/35020524", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030103352", 
              "https://doi.org/10.1038/35020524"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/35020524", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030103352", 
              "https://doi.org/10.1038/35020524"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00999532", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1033444969", 
              "https://doi.org/10.1007/bf00999532"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1146/annurev.bi.53.070184.004043", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1037144329"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/bip.360340105", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1047664906"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/bip.360340105", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1047664906"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1006/jmbi.1994.1121", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1049442230"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja00050a053", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055702289"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja00109a002", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055707649"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1142/s0219525906000732", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1062998314"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/b104331", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1086218005", 
              "https://doi.org/10.1007/b104331"
            ], 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "2012-01", 
        "datePublishedReg": "2012-01-01", 
        "description": "The construction of chemical species with topological properties is an area of increasing interest. Numerous such structures have been synthesized in recent years, particularly from DNA, which is a natural synthon for these molecules. Recently, higher-order topological structures have been introduced. These hyper-structures consist of combinations of simple structures, such as a Brunnian Link of Brunnian Links or a Hopf Ring of Hopf Rings, or combinations thereof. In this article, we discuss the possibilities of constructing these hyper-structures with real molecules, particularly emphasizing the tools that result from the double helical structure of DNA.", 
        "genre": "research_article", 
        "id": "sg:pub.10.1007/s10910-011-9907-3", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": true, 
        "isFundedItemOf": [
          {
            "id": "sg:grant.2509838", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2635128", 
            "type": "MonetaryGrant"
          }
        ], 
        "isPartOf": [
          {
            "id": "sg:journal.1026076", 
            "issn": [
              "0259-9791", 
              "1572-8897"
            ], 
            "name": "Journal of Mathematical Chemistry", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "1", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "50"
          }
        ], 
        "name": "On the chemical synthesis of new topological structures", 
        "pagination": "220-232", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "b6db2b72ff9c4fe6e9e638b7bd5cc9e563e715d690f1f204e6ae5b38ec54ae8b"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "22544990"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "100971281"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1007/s10910-011-9907-3"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1038386249"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1007/s10910-011-9907-3", 
          "https://app.dimensions.ai/details/publication/pub.1038386249"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-10T15:52", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8664_00000514.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "http://link.springer.com/10.1007%2Fs10910-011-9907-3"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10910-011-9907-3'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10910-011-9907-3'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10910-011-9907-3'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10910-011-9907-3'


     

    This table displays all metadata directly associated to this object as RDF triples.

    131 TRIPLES      21 PREDICATES      43 URIs      21 LITERALS      9 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1007/s10910-011-9907-3 schema:about anzsrc-for:09
    2 anzsrc-for:0905
    3 schema:author Nc99371d524ee447599a3c4ab57276f36
    4 schema:citation sg:pub.10.1007/b104331
    5 sg:pub.10.1007/bf00999532
    6 sg:pub.10.1007/bf01169193
    7 sg:pub.10.1038/35020524
    8 sg:pub.10.1038/386137b0
    9 sg:pub.10.1140/epjst/e2010-01180-8
    10 https://doi.org/10.1002/anie.201007685
    11 https://doi.org/10.1002/bip.360340105
    12 https://doi.org/10.1006/jmbi.1994.1121
    13 https://doi.org/10.1021/ja00050a053
    14 https://doi.org/10.1021/ja00109a002
    15 https://doi.org/10.1039/b819333a
    16 https://doi.org/10.1142/s0219525906000732
    17 https://doi.org/10.1146/annurev.bi.53.070184.004043
    18 schema:datePublished 2012-01
    19 schema:datePublishedReg 2012-01-01
    20 schema:description The construction of chemical species with topological properties is an area of increasing interest. Numerous such structures have been synthesized in recent years, particularly from DNA, which is a natural synthon for these molecules. Recently, higher-order topological structures have been introduced. These hyper-structures consist of combinations of simple structures, such as a Brunnian Link of Brunnian Links or a Hopf Ring of Hopf Rings, or combinations thereof. In this article, we discuss the possibilities of constructing these hyper-structures with real molecules, particularly emphasizing the tools that result from the double helical structure of DNA.
    21 schema:genre research_article
    22 schema:inLanguage en
    23 schema:isAccessibleForFree true
    24 schema:isPartOf N09d15569053749c4b0e93a73059d0b96
    25 Nfaae3d192708479c95c10863d62371af
    26 sg:journal.1026076
    27 schema:name On the chemical synthesis of new topological structures
    28 schema:pagination 220-232
    29 schema:productId N54f28cfd48b645d2b2c111b184b8bd2e
    30 N70c3fc8cc2ab420291a92b0266e67e36
    31 N776a0f855c5f49cc91ae227299073f13
    32 N99f95774b7c34a6ba7fe6a8f0caa6f55
    33 Nb6ed8d53caca4283bf73b88f8e55e30c
    34 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038386249
    35 https://doi.org/10.1007/s10910-011-9907-3
    36 schema:sdDatePublished 2019-04-10T15:52
    37 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    38 schema:sdPublisher Ndf5c3ed3fadc4beb96ab87e301191a44
    39 schema:url http://link.springer.com/10.1007%2Fs10910-011-9907-3
    40 sgo:license sg:explorer/license/
    41 sgo:sdDataset articles
    42 rdf:type schema:ScholarlyArticle
    43 N09d15569053749c4b0e93a73059d0b96 schema:issueNumber 1
    44 rdf:type schema:PublicationIssue
    45 N54f28cfd48b645d2b2c111b184b8bd2e schema:name dimensions_id
    46 schema:value pub.1038386249
    47 rdf:type schema:PropertyValue
    48 N70c3fc8cc2ab420291a92b0266e67e36 schema:name doi
    49 schema:value 10.1007/s10910-011-9907-3
    50 rdf:type schema:PropertyValue
    51 N776a0f855c5f49cc91ae227299073f13 schema:name nlm_unique_id
    52 schema:value 100971281
    53 rdf:type schema:PropertyValue
    54 N99f95774b7c34a6ba7fe6a8f0caa6f55 schema:name readcube_id
    55 schema:value b6db2b72ff9c4fe6e9e638b7bd5cc9e563e715d690f1f204e6ae5b38ec54ae8b
    56 rdf:type schema:PropertyValue
    57 Nb6ed8d53caca4283bf73b88f8e55e30c schema:name pubmed_id
    58 schema:value 22544990
    59 rdf:type schema:PropertyValue
    60 Nc99371d524ee447599a3c4ab57276f36 rdf:first sg:person.010704501247.17
    61 rdf:rest Nec722a3c40ab495a9352f1a589585dce
    62 Ndf5c3ed3fadc4beb96ab87e301191a44 schema:name Springer Nature - SN SciGraph project
    63 rdf:type schema:Organization
    64 Nec722a3c40ab495a9352f1a589585dce rdf:first sg:person.01155412761.86
    65 rdf:rest rdf:nil
    66 Nfaae3d192708479c95c10863d62371af schema:volumeNumber 50
    67 rdf:type schema:PublicationVolume
    68 anzsrc-for:09 schema:inDefinedTermSet anzsrc-for:
    69 schema:name Engineering
    70 rdf:type schema:DefinedTerm
    71 anzsrc-for:0905 schema:inDefinedTermSet anzsrc-for:
    72 schema:name Civil Engineering
    73 rdf:type schema:DefinedTerm
    74 sg:grant.2509838 http://pending.schema.org/fundedItem sg:pub.10.1007/s10910-011-9907-3
    75 rdf:type schema:MonetaryGrant
    76 sg:grant.2635128 http://pending.schema.org/fundedItem sg:pub.10.1007/s10910-011-9907-3
    77 rdf:type schema:MonetaryGrant
    78 sg:journal.1026076 schema:issn 0259-9791
    79 1572-8897
    80 schema:name Journal of Mathematical Chemistry
    81 rdf:type schema:Periodical
    82 sg:person.010704501247.17 schema:affiliation https://www.grid.ac/institutes/grid.5947.f
    83 schema:familyName Baas
    84 schema:givenName Nils A.
    85 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010704501247.17
    86 rdf:type schema:Person
    87 sg:person.01155412761.86 schema:affiliation https://www.grid.ac/institutes/grid.137628.9
    88 schema:familyName Seeman
    89 schema:givenName Nadrian C.
    90 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01155412761.86
    91 rdf:type schema:Person
    92 sg:pub.10.1007/b104331 schema:sameAs https://app.dimensions.ai/details/publication/pub.1086218005
    93 https://doi.org/10.1007/b104331
    94 rdf:type schema:CreativeWork
    95 sg:pub.10.1007/bf00999532 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033444969
    96 https://doi.org/10.1007/bf00999532
    97 rdf:type schema:CreativeWork
    98 sg:pub.10.1007/bf01169193 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027997324
    99 https://doi.org/10.1007/bf01169193
    100 rdf:type schema:CreativeWork
    101 sg:pub.10.1038/35020524 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030103352
    102 https://doi.org/10.1038/35020524
    103 rdf:type schema:CreativeWork
    104 sg:pub.10.1038/386137b0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002822779
    105 https://doi.org/10.1038/386137b0
    106 rdf:type schema:CreativeWork
    107 sg:pub.10.1140/epjst/e2010-01180-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018300841
    108 https://doi.org/10.1140/epjst/e2010-01180-8
    109 rdf:type schema:CreativeWork
    110 https://doi.org/10.1002/anie.201007685 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018199848
    111 rdf:type schema:CreativeWork
    112 https://doi.org/10.1002/bip.360340105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047664906
    113 rdf:type schema:CreativeWork
    114 https://doi.org/10.1006/jmbi.1994.1121 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049442230
    115 rdf:type schema:CreativeWork
    116 https://doi.org/10.1021/ja00050a053 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055702289
    117 rdf:type schema:CreativeWork
    118 https://doi.org/10.1021/ja00109a002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055707649
    119 rdf:type schema:CreativeWork
    120 https://doi.org/10.1039/b819333a schema:sameAs https://app.dimensions.ai/details/publication/pub.1011784637
    121 rdf:type schema:CreativeWork
    122 https://doi.org/10.1142/s0219525906000732 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062998314
    123 rdf:type schema:CreativeWork
    124 https://doi.org/10.1146/annurev.bi.53.070184.004043 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037144329
    125 rdf:type schema:CreativeWork
    126 https://www.grid.ac/institutes/grid.137628.9 schema:alternateName New York University
    127 schema:name Department of Chemistry, New York University, 10003, New York, NY, USA
    128 rdf:type schema:Organization
    129 https://www.grid.ac/institutes/grid.5947.f schema:alternateName Norwegian University of Science and Technology
    130 schema:name Department of Mathematical Sciences, NTNU, 7491, Trondheim, Norway
    131 rdf:type schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...