Fluorescent Properties of Pentamethine Cyanine Dyes with Cyclopentene and Cyclohexene Group in Presence of Biological Molecules View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2005-11

AUTHORS

M. Yu. Losytskyy, K. D. Volkova, V. B. Kovalska, I. E. Makovenko, Yu. L. Slominskii, O. I. Tolmachev, S. M. Yarmoluk

ABSTRACT

A series of pentamethine cyanine dyes with cyclohexene or cyclopentene group in polymethyne chain, assumed as DNA groove-binders, were studied as fluorescent probes for nucleic acids as well as for native and denatured proteins. It was revealed that the presence of methyl or dimethyl substituent in 5 position of the cyclohexene group hinders the formation of dye-DNA fluorescent complex, while the methyl substituent in 2 position leads to the increasing of the dye-DNA complex fluorescence intensity. The dyes SL-251, SL-1041, and SL-1046 containing methyl group in the 2 position of the cyclic group, are reported as bright DNA-sensitive dyes. The study of the dyes DNA-binding specificity demonstrated significant AT-preference that points to the groove-binding interaction mode. At the same time, the dyes SL-251, SL-377, and SL-957 with the 2-methyl substituted cyclohexene group were shown to be sensitive fluorescent dyes both for nonspecific (in SDS presence) proteins detection and for native BSA. More... »

PAGES

849-857

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10895-005-0002-7

DOI

http://dx.doi.org/10.1007/s10895-005-0002-7

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1025697420

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/16283530


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