Database proton NMR chemical shifts for RNA signal assignment and validation View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-01

AUTHORS

Shawn Barton, Xiao Heng, Bruce A. Johnson, Michael F. Summers

ABSTRACT

The Biological Magnetic Resonance Data Bank contains NMR chemical shift depositions for 132 RNAs and RNA-containing complexes. We have analyzed the (1)H NMR chemical shifts reported for non-exchangeable protons of residues that reside within A-form helical regions of these RNAs. The analysis focused on the central base pair within a stretch of three adjacent base pairs (BP triplets), and included both Watson-Crick (WC; G:C, A:U) and G:U wobble pairs. Chemical shift values were included for all 4(3) possible WC-BP triplets, as well as 137 additional triplets that contain one or more G:U wobbles. Sequence-dependent chemical shift correlations were identified, including correlations involving terminating base pairs within the triplets and canonical and non-canonical structures adjacent to the BP triplets (i.e. bulges, loops, WC and non-WC BPs), despite the fact that the NMR data were obtained under different conditions of pH, buffer, ionic strength, and temperature. A computer program (RNAShifts) was developed that enables convenient comparison of RNA (1)H NMR assignments with database predictions, which should facilitate future signal assignment/validation efforts and enable rapid identification of non-canonical RNA structures and RNA-ligand/protein interaction sites. More... »

PAGES

33-46

References to SciGraph publications

  • 2001-09. Prediction of proton chemical shifts in RNA – Their use in structure refinement and validation in JOURNAL OF BIOMOLECULAR NMR
  • 1995-12. Calibration of ring-current effects in proteins and nucleic acids in JOURNAL OF BIOMOLECULAR NMR
  • 2004-01. New applications of 2D filtered/edited NOESY for assignment and structure elucidation of RNA and RNA-protein complexes in JOURNAL OF BIOMOLECULAR NMR
  • 2008-10. Solution structure of tRNAVal from refinement of homology model against residual dipolar coupling and SAXS data in JOURNAL OF BIOMOLECULAR NMR
  • 2008-10. Conformational signatures of 13C chemical shifts in RNA ribose in JOURNAL OF BIOMOLECULAR NMR
  • 2004-09. Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus in NATURE
  • 2010-01. Isotope labeling strategies for NMR studies of RNA in JOURNAL OF BIOMOLECULAR NMR
  • 1992-01. Three-dimensional heteronuclear NMR studies of RNA in NATURE
  • 2012-02. A procedure to validate and correct the 13C chemical shift calibration of RNA datasets in JOURNAL OF BIOMOLECULAR NMR
  • 2011-12. An equilibrium-dependent retroviral mRNA switch regulates translational recoding in NATURE
  • 2008-04-17. Isolation of an active step I spliceosome and composition of its RNP core in NATURE
  • 2007-07. The multifunctional nucleolus in NATURE REVIEWS MOLECULAR CELL BIOLOGY
  • 1994-03. The 13C Chemical-Shift Index: A simple method for the identification of protein secondary structure using 13C chemical-shift data in JOURNAL OF BIOMOLECULAR NMR
  • 1994-09. NMR View: A computer program for the visualization and analysis of NMR data in JOURNAL OF BIOMOLECULAR NMR
  • 2012-04. RNA-PAIRS: RNA probabilistic assignment of imino resonance shifts in JOURNAL OF BIOMOLECULAR NMR
  • 2012. Isotope Labeling and Segmental Labeling of Larger RNAs for NMR Structural Studies in ISOTOPE LABELING IN BIOMOLECULAR NMR
  • 2003-12. Structure of HCV IRES domain II determined by NMR in NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • 1993-03. Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins in JOURNAL OF BIOMOLECULAR NMR
  • 2008-03. A structural understanding of the dynamic ribosome machine in NATURE REVIEWS MOLECULAR CELL BIOLOGY
  • 2010-07. Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H–13C residual dipolar coupling on refinement in JOURNAL OF BIOMOLECULAR NMR
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s10858-012-9683-9

    DOI

    http://dx.doi.org/10.1007/s10858-012-9683-9

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1039168328

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/23180050


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "about": [
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Biochemistry and Cell Biology", 
            "type": "DefinedTerm"
          }, 
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Biological Sciences", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Base Pairing", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Databases, Factual", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Nuclear Magnetic Resonance, Biomolecular", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Nucleic Acid Conformation", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Protons", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "RNA", 
            "type": "DefinedTerm"
          }
        ], 
        "author": [
          {
            "affiliation": {
              "name": [
                "Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA", 
                "Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Barton", 
            "givenName": "Shawn", 
            "id": "sg:person.0605203710.90", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0605203710.90"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "name": [
                "Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA", 
                "Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Heng", 
            "givenName": "Xiao", 
            "id": "sg:person.01334565047.57", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01334565047.57"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "name": [
                "Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA", 
                "One Moon Scientific, Inc., 839 Grant Ave., 07090, Westfield, NJ, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Johnson", 
            "givenName": "Bruce A.", 
            "id": "sg:person.0661062141.02", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661062141.02"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "name": [
                "Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA", 
                "Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Summers", 
            "givenName": "Michael F.", 
            "id": "sg:person.01113612247.96", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01113612247.96"
            ], 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "sg:pub.10.1007/s10858-010-9424-x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1000207805", 
              "https://doi.org/10.1007/s10858-010-9424-x"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-010-9424-x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1000207805", 
              "https://doi.org/10.1007/s10858-010-9424-x"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00178261", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1000350149", 
              "https://doi.org/10.1007/bf00178261"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2011.04.029", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1001389763"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1074/jbc.m004974200", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1002269257"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2006.10.013", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1002414528"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00404272", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1004332552", 
              "https://doi.org/10.1007/bf00404272"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00404272", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1004332552", 
              "https://doi.org/10.1007/bf00404272"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.tibs.2007.08.005", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1006457315"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/20.17.4515", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1006707613"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.cell.2009.02.006", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1008070972"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2005.05.069", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1009947496"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2005.05.069", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1009947496"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0076-6879(88)64064-x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1010283958"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nature10657", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1010361977", 
              "https://doi.org/10.1038/nature10657"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00175245", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1010505080", 
              "https://doi.org/10.1007/bf00175245"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/978-94-007-4954-2_7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1012620000", 
              "https://doi.org/10.1007/978-94-007-4954-2_7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/jcc.20290", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1012674250"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/jcc.20290", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1012674250"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0076-6879(05)94016-0", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1014052190"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.0800256105", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1014826453"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0092-8674(02)00725-0", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1015192083"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.0506166102", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1017086753"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.0506166102", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1017086753"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1126/science.1210460", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1017308662"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nature06842", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1022307264", 
              "https://doi.org/10.1038/nature06842"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0076-6879(09)68005-8", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1022868650"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nrm2184", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1023910701", 
              "https://doi.org/10.1038/nrm2184"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2010.09.009", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1024142487"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.tig.2006.03.003", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1025450285"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2004.01.037", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1025473221"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-008-9271-1", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1025623147", 
              "https://doi.org/10.1007/s10858-008-9271-1"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.pnmrs.2010.01.002", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1026710137"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/0022-2836(91)90214-q", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1026803268"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.tibs.2007.08.002", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1027037243"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1261/rna.031138.111", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1029347734"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2009.08.001", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030095010"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/embo-reports/kvd001", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030443462"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.sbi.2007.05.004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030589711"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-008-9267-x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030900775", 
              "https://doi.org/10.1007/s10858-008-9267-x"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0092-8674(04)00045-5", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031254572"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nrm2352", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031913067", 
              "https://doi.org/10.1038/nrm2352"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.ymeth.2010.06.009", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031930104"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.ymeth.2010.06.009", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031930104"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.sbi.2010.04.001", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1032486376"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/20.17.4507", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1033622436"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/355184a0", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1033642944", 
              "https://doi.org/10.1038/355184a0"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00197633", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1035644731", 
              "https://doi.org/10.1007/bf00197633"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00197633", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1035644731", 
              "https://doi.org/10.1007/bf00197633"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s0076-6879(95)61015-4", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1036322017"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/gkn397", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1037086049"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/15.22.9109", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1037136818"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nature02944", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1038445625", 
              "https://doi.org/10.1038/nature02944"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nature02944", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1038445625", 
              "https://doi.org/10.1038/nature02944"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.0610313104", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1038680697"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-009-9375-2", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1040954153", 
              "https://doi.org/10.1007/s10858-009-9375-2"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-009-9375-2", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1040954153", 
              "https://doi.org/10.1007/s10858-009-9375-2"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.77.8.4679", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1042641882"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1006/jmbi.1996.0855", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1043706774"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1023/b:jnmr.0000012861.95939.05", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1043815631", 
              "https://doi.org/10.1023/b:jnmr.0000012861.95939.05"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/12.8.3563", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1044063281"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nsb1004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1045172309", 
              "https://doi.org/10.1038/nsb1004"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nsb1004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1045172309", 
              "https://doi.org/10.1038/nsb1004"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-012-9603-z", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1045280257", 
              "https://doi.org/10.1007/s10858-012-9603-z"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10858-011-9600-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1046259986", 
              "https://doi.org/10.1007/s10858-011-9600-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/gkn305", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1047665033"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.93.1.44", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1048283265"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1006/jmre.2001.2314", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1049381607"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1023/a:1011914132531", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1051905524", 
              "https://doi.org/10.1023/a:1011914132531"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jmb.2012.01.033", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1053637475"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bi00053a002", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055158951"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bi00121a010", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055161671"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bi200524n", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055204201"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bi200524n", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055204201"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja026647w", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055830987"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja026647w", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055830987"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja039446g", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055835057"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja039446g", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055835057"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja0727417", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055845101"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja0727417", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055845101"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja7114508", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055857667"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/ja7114508", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1055857667"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1076880564", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1077017484", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1082972581", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bk-1999-0732.ch014", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1089355007"
            ], 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "2013-01", 
        "datePublishedReg": "2013-01-01", 
        "description": "The Biological Magnetic Resonance Data Bank contains NMR chemical shift depositions for 132 RNAs and RNA-containing complexes. We have analyzed the (1)H NMR chemical shifts reported for non-exchangeable protons of residues that reside within A-form helical regions of these RNAs. The analysis focused on the central base pair within a stretch of three adjacent base pairs (BP triplets), and included both Watson-Crick (WC; G:C, A:U) and G:U wobble pairs. Chemical shift values were included for all 4(3) possible WC-BP triplets, as well as 137 additional triplets that contain one or more G:U wobbles. Sequence-dependent chemical shift correlations were identified, including correlations involving terminating base pairs within the triplets and canonical and non-canonical structures adjacent to the BP triplets (i.e. bulges, loops, WC and non-WC BPs), despite the fact that the NMR data were obtained under different conditions of pH, buffer, ionic strength, and temperature. A computer program (RNAShifts) was developed that enables convenient comparison of RNA (1)H NMR assignments with database predictions, which should facilitate future signal assignment/validation efforts and enable rapid identification of non-canonical RNA structures and RNA-ligand/protein interaction sites.", 
        "genre": "research_article", 
        "id": "sg:pub.10.1007/s10858-012-9683-9", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": true, 
        "isFundedItemOf": [
          {
            "id": "sg:grant.2685953", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2512953", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2440548", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2628483", 
            "type": "MonetaryGrant"
          }
        ], 
        "isPartOf": [
          {
            "id": "sg:journal.1101518", 
            "issn": [
              "0925-2738", 
              "1573-5001"
            ], 
            "name": "Journal of Biomolecular NMR", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "1", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "55"
          }
        ], 
        "name": "Database proton NMR chemical shifts for RNA signal assignment and validation", 
        "pagination": "33-46", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "ba93c26339eb0b67cd4c25eda44108c6389bb8c9dc1c2f29ae1dd77573fa462b"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "23180050"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "9110829"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1007/s10858-012-9683-9"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1039168328"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1007/s10858-012-9683-9", 
          "https://app.dimensions.ai/details/publication/pub.1039168328"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-11T13:06", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000367_0000000367/records_88218_00000000.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "http://link.springer.com/10.1007/s10858-012-9683-9"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10858-012-9683-9'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10858-012-9683-9'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10858-012-9683-9'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10858-012-9683-9'


     

    This table displays all metadata directly associated to this object as RDF triples.

    361 TRIPLES      21 PREDICATES      106 URIs      27 LITERALS      15 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1007/s10858-012-9683-9 schema:about N1539f8b573554de5b9ed67a986afb433
    2 N23b525742ec747b584a9fe63b37dc795
    3 N440d8d503da74f6e8c71577ac7c8bb40
    4 N517835ccaa1a485986231a9ab91b8e80
    5 N7f086479006d40b2a50b50b64f5af7c2
    6 N7f50b9e498e641a28f8e0bd0509eb615
    7 anzsrc-for:06
    8 anzsrc-for:0601
    9 schema:author N1f5a9894c4d7478ab6e148b1edeb3276
    10 schema:citation sg:pub.10.1007/978-94-007-4954-2_7
    11 sg:pub.10.1007/bf00175245
    12 sg:pub.10.1007/bf00178261
    13 sg:pub.10.1007/bf00197633
    14 sg:pub.10.1007/bf00404272
    15 sg:pub.10.1007/s10858-008-9267-x
    16 sg:pub.10.1007/s10858-008-9271-1
    17 sg:pub.10.1007/s10858-009-9375-2
    18 sg:pub.10.1007/s10858-010-9424-x
    19 sg:pub.10.1007/s10858-011-9600-7
    20 sg:pub.10.1007/s10858-012-9603-z
    21 sg:pub.10.1023/a:1011914132531
    22 sg:pub.10.1023/b:jnmr.0000012861.95939.05
    23 sg:pub.10.1038/355184a0
    24 sg:pub.10.1038/nature02944
    25 sg:pub.10.1038/nature06842
    26 sg:pub.10.1038/nature10657
    27 sg:pub.10.1038/nrm2184
    28 sg:pub.10.1038/nrm2352
    29 sg:pub.10.1038/nsb1004
    30 https://app.dimensions.ai/details/publication/pub.1076880564
    31 https://app.dimensions.ai/details/publication/pub.1077017484
    32 https://app.dimensions.ai/details/publication/pub.1082972581
    33 https://doi.org/10.1002/jcc.20290
    34 https://doi.org/10.1006/jmbi.1996.0855
    35 https://doi.org/10.1006/jmre.2001.2314
    36 https://doi.org/10.1016/0022-2836(91)90214-q
    37 https://doi.org/10.1016/j.cell.2009.02.006
    38 https://doi.org/10.1016/j.jmb.2004.01.037
    39 https://doi.org/10.1016/j.jmb.2005.05.069
    40 https://doi.org/10.1016/j.jmb.2006.10.013
    41 https://doi.org/10.1016/j.jmb.2009.08.001
    42 https://doi.org/10.1016/j.jmb.2010.09.009
    43 https://doi.org/10.1016/j.jmb.2011.04.029
    44 https://doi.org/10.1016/j.jmb.2012.01.033
    45 https://doi.org/10.1016/j.pnmrs.2010.01.002
    46 https://doi.org/10.1016/j.sbi.2007.05.004
    47 https://doi.org/10.1016/j.sbi.2010.04.001
    48 https://doi.org/10.1016/j.tibs.2007.08.002
    49 https://doi.org/10.1016/j.tibs.2007.08.005
    50 https://doi.org/10.1016/j.tig.2006.03.003
    51 https://doi.org/10.1016/j.ymeth.2010.06.009
    52 https://doi.org/10.1016/s0076-6879(05)94016-0
    53 https://doi.org/10.1016/s0076-6879(09)68005-8
    54 https://doi.org/10.1016/s0076-6879(88)64064-x
    55 https://doi.org/10.1016/s0076-6879(95)61015-4
    56 https://doi.org/10.1016/s0092-8674(02)00725-0
    57 https://doi.org/10.1016/s0092-8674(04)00045-5
    58 https://doi.org/10.1021/bi00053a002
    59 https://doi.org/10.1021/bi00121a010
    60 https://doi.org/10.1021/bi200524n
    61 https://doi.org/10.1021/bk-1999-0732.ch014
    62 https://doi.org/10.1021/ja026647w
    63 https://doi.org/10.1021/ja039446g
    64 https://doi.org/10.1021/ja0727417
    65 https://doi.org/10.1021/ja7114508
    66 https://doi.org/10.1073/pnas.0506166102
    67 https://doi.org/10.1073/pnas.0610313104
    68 https://doi.org/10.1073/pnas.0800256105
    69 https://doi.org/10.1073/pnas.77.8.4679
    70 https://doi.org/10.1073/pnas.93.1.44
    71 https://doi.org/10.1074/jbc.m004974200
    72 https://doi.org/10.1093/embo-reports/kvd001
    73 https://doi.org/10.1093/nar/12.8.3563
    74 https://doi.org/10.1093/nar/15.22.9109
    75 https://doi.org/10.1093/nar/20.17.4507
    76 https://doi.org/10.1093/nar/20.17.4515
    77 https://doi.org/10.1093/nar/gkn305
    78 https://doi.org/10.1093/nar/gkn397
    79 https://doi.org/10.1126/science.1210460
    80 https://doi.org/10.1261/rna.031138.111
    81 schema:datePublished 2013-01
    82 schema:datePublishedReg 2013-01-01
    83 schema:description The Biological Magnetic Resonance Data Bank contains NMR chemical shift depositions for 132 RNAs and RNA-containing complexes. We have analyzed the (1)H NMR chemical shifts reported for non-exchangeable protons of residues that reside within A-form helical regions of these RNAs. The analysis focused on the central base pair within a stretch of three adjacent base pairs (BP triplets), and included both Watson-Crick (WC; G:C, A:U) and G:U wobble pairs. Chemical shift values were included for all 4(3) possible WC-BP triplets, as well as 137 additional triplets that contain one or more G:U wobbles. Sequence-dependent chemical shift correlations were identified, including correlations involving terminating base pairs within the triplets and canonical and non-canonical structures adjacent to the BP triplets (i.e. bulges, loops, WC and non-WC BPs), despite the fact that the NMR data were obtained under different conditions of pH, buffer, ionic strength, and temperature. A computer program (RNAShifts) was developed that enables convenient comparison of RNA (1)H NMR assignments with database predictions, which should facilitate future signal assignment/validation efforts and enable rapid identification of non-canonical RNA structures and RNA-ligand/protein interaction sites.
    84 schema:genre research_article
    85 schema:inLanguage en
    86 schema:isAccessibleForFree true
    87 schema:isPartOf N1f6be69070b84aad87483aca5702ee83
    88 Nd9954af1d02448b4a2e25a85c2cd4c64
    89 sg:journal.1101518
    90 schema:name Database proton NMR chemical shifts for RNA signal assignment and validation
    91 schema:pagination 33-46
    92 schema:productId N26f2a0eb6abb4452a75c2a70b484ddc8
    93 N4b8c3ca778c24eaaa7f69daf7f71dc4e
    94 N4c446746a4d14054affae45f1765fbed
    95 N73b772a8412847e69cecbe27cba62754
    96 N758c4747fac24ccb8f638d3c9b06857c
    97 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039168328
    98 https://doi.org/10.1007/s10858-012-9683-9
    99 schema:sdDatePublished 2019-04-11T13:06
    100 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    101 schema:sdPublisher N4df2ba97e5474e50a180a86e8aeb4b92
    102 schema:url http://link.springer.com/10.1007/s10858-012-9683-9
    103 sgo:license sg:explorer/license/
    104 sgo:sdDataset articles
    105 rdf:type schema:ScholarlyArticle
    106 N1539f8b573554de5b9ed67a986afb433 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    107 schema:name Databases, Factual
    108 rdf:type schema:DefinedTerm
    109 N1f5a9894c4d7478ab6e148b1edeb3276 rdf:first sg:person.0605203710.90
    110 rdf:rest Na09ef87128074d31914e88041e62c071
    111 N1f6be69070b84aad87483aca5702ee83 schema:issueNumber 1
    112 rdf:type schema:PublicationIssue
    113 N23b525742ec747b584a9fe63b37dc795 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    114 schema:name RNA
    115 rdf:type schema:DefinedTerm
    116 N26f2a0eb6abb4452a75c2a70b484ddc8 schema:name doi
    117 schema:value 10.1007/s10858-012-9683-9
    118 rdf:type schema:PropertyValue
    119 N2d9e20b03f6e491d8aceea4bacc88c60 schema:name Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    120 Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    121 rdf:type schema:Organization
    122 N43c321912e25460cafd525ba2de18193 schema:name Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    123 Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    124 rdf:type schema:Organization
    125 N440d8d503da74f6e8c71577ac7c8bb40 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    126 schema:name Protons
    127 rdf:type schema:DefinedTerm
    128 N4b8c3ca778c24eaaa7f69daf7f71dc4e schema:name nlm_unique_id
    129 schema:value 9110829
    130 rdf:type schema:PropertyValue
    131 N4c446746a4d14054affae45f1765fbed schema:name dimensions_id
    132 schema:value pub.1039168328
    133 rdf:type schema:PropertyValue
    134 N4df2ba97e5474e50a180a86e8aeb4b92 schema:name Springer Nature - SN SciGraph project
    135 rdf:type schema:Organization
    136 N517835ccaa1a485986231a9ab91b8e80 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    137 schema:name Nuclear Magnetic Resonance, Biomolecular
    138 rdf:type schema:DefinedTerm
    139 N6e083f8bb41346ee9d3fab52e890af02 rdf:first sg:person.0661062141.02
    140 rdf:rest N8820a5d58a994a51b3e268d21a7b1886
    141 N73b772a8412847e69cecbe27cba62754 schema:name readcube_id
    142 schema:value ba93c26339eb0b67cd4c25eda44108c6389bb8c9dc1c2f29ae1dd77573fa462b
    143 rdf:type schema:PropertyValue
    144 N758c4747fac24ccb8f638d3c9b06857c schema:name pubmed_id
    145 schema:value 23180050
    146 rdf:type schema:PropertyValue
    147 N7d49d17db333402f98fd057587f924c4 schema:name Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    148 One Moon Scientific, Inc., 839 Grant Ave., 07090, Westfield, NJ, USA
    149 rdf:type schema:Organization
    150 N7f086479006d40b2a50b50b64f5af7c2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    151 schema:name Nucleic Acid Conformation
    152 rdf:type schema:DefinedTerm
    153 N7f50b9e498e641a28f8e0bd0509eb615 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    154 schema:name Base Pairing
    155 rdf:type schema:DefinedTerm
    156 N84cbfdbe93904edba7a293fa83044e65 schema:name Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    157 Howard Hughes Medical Institute, University of Maryland, Baltimore County, 1000 Hilltop Circle, 21250, Baltimore, MD, USA
    158 rdf:type schema:Organization
    159 N8820a5d58a994a51b3e268d21a7b1886 rdf:first sg:person.01113612247.96
    160 rdf:rest rdf:nil
    161 Na09ef87128074d31914e88041e62c071 rdf:first sg:person.01334565047.57
    162 rdf:rest N6e083f8bb41346ee9d3fab52e890af02
    163 Nd9954af1d02448b4a2e25a85c2cd4c64 schema:volumeNumber 55
    164 rdf:type schema:PublicationVolume
    165 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
    166 schema:name Biological Sciences
    167 rdf:type schema:DefinedTerm
    168 anzsrc-for:0601 schema:inDefinedTermSet anzsrc-for:
    169 schema:name Biochemistry and Cell Biology
    170 rdf:type schema:DefinedTerm
    171 sg:grant.2440548 http://pending.schema.org/fundedItem sg:pub.10.1007/s10858-012-9683-9
    172 rdf:type schema:MonetaryGrant
    173 sg:grant.2512953 http://pending.schema.org/fundedItem sg:pub.10.1007/s10858-012-9683-9
    174 rdf:type schema:MonetaryGrant
    175 sg:grant.2628483 http://pending.schema.org/fundedItem sg:pub.10.1007/s10858-012-9683-9
    176 rdf:type schema:MonetaryGrant
    177 sg:grant.2685953 http://pending.schema.org/fundedItem sg:pub.10.1007/s10858-012-9683-9
    178 rdf:type schema:MonetaryGrant
    179 sg:journal.1101518 schema:issn 0925-2738
    180 1573-5001
    181 schema:name Journal of Biomolecular NMR
    182 rdf:type schema:Periodical
    183 sg:person.01113612247.96 schema:affiliation N43c321912e25460cafd525ba2de18193
    184 schema:familyName Summers
    185 schema:givenName Michael F.
    186 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01113612247.96
    187 rdf:type schema:Person
    188 sg:person.01334565047.57 schema:affiliation N2d9e20b03f6e491d8aceea4bacc88c60
    189 schema:familyName Heng
    190 schema:givenName Xiao
    191 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01334565047.57
    192 rdf:type schema:Person
    193 sg:person.0605203710.90 schema:affiliation N84cbfdbe93904edba7a293fa83044e65
    194 schema:familyName Barton
    195 schema:givenName Shawn
    196 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0605203710.90
    197 rdf:type schema:Person
    198 sg:person.0661062141.02 schema:affiliation N7d49d17db333402f98fd057587f924c4
    199 schema:familyName Johnson
    200 schema:givenName Bruce A.
    201 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0661062141.02
    202 rdf:type schema:Person
    203 sg:pub.10.1007/978-94-007-4954-2_7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012620000
    204 https://doi.org/10.1007/978-94-007-4954-2_7
    205 rdf:type schema:CreativeWork
    206 sg:pub.10.1007/bf00175245 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010505080
    207 https://doi.org/10.1007/bf00175245
    208 rdf:type schema:CreativeWork
    209 sg:pub.10.1007/bf00178261 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000350149
    210 https://doi.org/10.1007/bf00178261
    211 rdf:type schema:CreativeWork
    212 sg:pub.10.1007/bf00197633 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035644731
    213 https://doi.org/10.1007/bf00197633
    214 rdf:type schema:CreativeWork
    215 sg:pub.10.1007/bf00404272 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004332552
    216 https://doi.org/10.1007/bf00404272
    217 rdf:type schema:CreativeWork
    218 sg:pub.10.1007/s10858-008-9267-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1030900775
    219 https://doi.org/10.1007/s10858-008-9267-x
    220 rdf:type schema:CreativeWork
    221 sg:pub.10.1007/s10858-008-9271-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025623147
    222 https://doi.org/10.1007/s10858-008-9271-1
    223 rdf:type schema:CreativeWork
    224 sg:pub.10.1007/s10858-009-9375-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040954153
    225 https://doi.org/10.1007/s10858-009-9375-2
    226 rdf:type schema:CreativeWork
    227 sg:pub.10.1007/s10858-010-9424-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1000207805
    228 https://doi.org/10.1007/s10858-010-9424-x
    229 rdf:type schema:CreativeWork
    230 sg:pub.10.1007/s10858-011-9600-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046259986
    231 https://doi.org/10.1007/s10858-011-9600-7
    232 rdf:type schema:CreativeWork
    233 sg:pub.10.1007/s10858-012-9603-z schema:sameAs https://app.dimensions.ai/details/publication/pub.1045280257
    234 https://doi.org/10.1007/s10858-012-9603-z
    235 rdf:type schema:CreativeWork
    236 sg:pub.10.1023/a:1011914132531 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051905524
    237 https://doi.org/10.1023/a:1011914132531
    238 rdf:type schema:CreativeWork
    239 sg:pub.10.1023/b:jnmr.0000012861.95939.05 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043815631
    240 https://doi.org/10.1023/b:jnmr.0000012861.95939.05
    241 rdf:type schema:CreativeWork
    242 sg:pub.10.1038/355184a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033642944
    243 https://doi.org/10.1038/355184a0
    244 rdf:type schema:CreativeWork
    245 sg:pub.10.1038/nature02944 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038445625
    246 https://doi.org/10.1038/nature02944
    247 rdf:type schema:CreativeWork
    248 sg:pub.10.1038/nature06842 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022307264
    249 https://doi.org/10.1038/nature06842
    250 rdf:type schema:CreativeWork
    251 sg:pub.10.1038/nature10657 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010361977
    252 https://doi.org/10.1038/nature10657
    253 rdf:type schema:CreativeWork
    254 sg:pub.10.1038/nrm2184 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023910701
    255 https://doi.org/10.1038/nrm2184
    256 rdf:type schema:CreativeWork
    257 sg:pub.10.1038/nrm2352 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031913067
    258 https://doi.org/10.1038/nrm2352
    259 rdf:type schema:CreativeWork
    260 sg:pub.10.1038/nsb1004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045172309
    261 https://doi.org/10.1038/nsb1004
    262 rdf:type schema:CreativeWork
    263 https://app.dimensions.ai/details/publication/pub.1076880564 schema:CreativeWork
    264 https://app.dimensions.ai/details/publication/pub.1077017484 schema:CreativeWork
    265 https://app.dimensions.ai/details/publication/pub.1082972581 schema:CreativeWork
    266 https://doi.org/10.1002/jcc.20290 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012674250
    267 rdf:type schema:CreativeWork
    268 https://doi.org/10.1006/jmbi.1996.0855 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043706774
    269 rdf:type schema:CreativeWork
    270 https://doi.org/10.1006/jmre.2001.2314 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049381607
    271 rdf:type schema:CreativeWork
    272 https://doi.org/10.1016/0022-2836(91)90214-q schema:sameAs https://app.dimensions.ai/details/publication/pub.1026803268
    273 rdf:type schema:CreativeWork
    274 https://doi.org/10.1016/j.cell.2009.02.006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008070972
    275 rdf:type schema:CreativeWork
    276 https://doi.org/10.1016/j.jmb.2004.01.037 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025473221
    277 rdf:type schema:CreativeWork
    278 https://doi.org/10.1016/j.jmb.2005.05.069 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009947496
    279 rdf:type schema:CreativeWork
    280 https://doi.org/10.1016/j.jmb.2006.10.013 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002414528
    281 rdf:type schema:CreativeWork
    282 https://doi.org/10.1016/j.jmb.2009.08.001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030095010
    283 rdf:type schema:CreativeWork
    284 https://doi.org/10.1016/j.jmb.2010.09.009 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024142487
    285 rdf:type schema:CreativeWork
    286 https://doi.org/10.1016/j.jmb.2011.04.029 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001389763
    287 rdf:type schema:CreativeWork
    288 https://doi.org/10.1016/j.jmb.2012.01.033 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053637475
    289 rdf:type schema:CreativeWork
    290 https://doi.org/10.1016/j.pnmrs.2010.01.002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026710137
    291 rdf:type schema:CreativeWork
    292 https://doi.org/10.1016/j.sbi.2007.05.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030589711
    293 rdf:type schema:CreativeWork
    294 https://doi.org/10.1016/j.sbi.2010.04.001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032486376
    295 rdf:type schema:CreativeWork
    296 https://doi.org/10.1016/j.tibs.2007.08.002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027037243
    297 rdf:type schema:CreativeWork
    298 https://doi.org/10.1016/j.tibs.2007.08.005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006457315
    299 rdf:type schema:CreativeWork
    300 https://doi.org/10.1016/j.tig.2006.03.003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025450285
    301 rdf:type schema:CreativeWork
    302 https://doi.org/10.1016/j.ymeth.2010.06.009 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031930104
    303 rdf:type schema:CreativeWork
    304 https://doi.org/10.1016/s0076-6879(05)94016-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014052190
    305 rdf:type schema:CreativeWork
    306 https://doi.org/10.1016/s0076-6879(09)68005-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022868650
    307 rdf:type schema:CreativeWork
    308 https://doi.org/10.1016/s0076-6879(88)64064-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1010283958
    309 rdf:type schema:CreativeWork
    310 https://doi.org/10.1016/s0076-6879(95)61015-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036322017
    311 rdf:type schema:CreativeWork
    312 https://doi.org/10.1016/s0092-8674(02)00725-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015192083
    313 rdf:type schema:CreativeWork
    314 https://doi.org/10.1016/s0092-8674(04)00045-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031254572
    315 rdf:type schema:CreativeWork
    316 https://doi.org/10.1021/bi00053a002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055158951
    317 rdf:type schema:CreativeWork
    318 https://doi.org/10.1021/bi00121a010 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055161671
    319 rdf:type schema:CreativeWork
    320 https://doi.org/10.1021/bi200524n schema:sameAs https://app.dimensions.ai/details/publication/pub.1055204201
    321 rdf:type schema:CreativeWork
    322 https://doi.org/10.1021/bk-1999-0732.ch014 schema:sameAs https://app.dimensions.ai/details/publication/pub.1089355007
    323 rdf:type schema:CreativeWork
    324 https://doi.org/10.1021/ja026647w schema:sameAs https://app.dimensions.ai/details/publication/pub.1055830987
    325 rdf:type schema:CreativeWork
    326 https://doi.org/10.1021/ja039446g schema:sameAs https://app.dimensions.ai/details/publication/pub.1055835057
    327 rdf:type schema:CreativeWork
    328 https://doi.org/10.1021/ja0727417 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055845101
    329 rdf:type schema:CreativeWork
    330 https://doi.org/10.1021/ja7114508 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055857667
    331 rdf:type schema:CreativeWork
    332 https://doi.org/10.1073/pnas.0506166102 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017086753
    333 rdf:type schema:CreativeWork
    334 https://doi.org/10.1073/pnas.0610313104 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038680697
    335 rdf:type schema:CreativeWork
    336 https://doi.org/10.1073/pnas.0800256105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014826453
    337 rdf:type schema:CreativeWork
    338 https://doi.org/10.1073/pnas.77.8.4679 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042641882
    339 rdf:type schema:CreativeWork
    340 https://doi.org/10.1073/pnas.93.1.44 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048283265
    341 rdf:type schema:CreativeWork
    342 https://doi.org/10.1074/jbc.m004974200 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002269257
    343 rdf:type schema:CreativeWork
    344 https://doi.org/10.1093/embo-reports/kvd001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030443462
    345 rdf:type schema:CreativeWork
    346 https://doi.org/10.1093/nar/12.8.3563 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044063281
    347 rdf:type schema:CreativeWork
    348 https://doi.org/10.1093/nar/15.22.9109 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037136818
    349 rdf:type schema:CreativeWork
    350 https://doi.org/10.1093/nar/20.17.4507 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033622436
    351 rdf:type schema:CreativeWork
    352 https://doi.org/10.1093/nar/20.17.4515 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006707613
    353 rdf:type schema:CreativeWork
    354 https://doi.org/10.1093/nar/gkn305 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047665033
    355 rdf:type schema:CreativeWork
    356 https://doi.org/10.1093/nar/gkn397 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037086049
    357 rdf:type schema:CreativeWork
    358 https://doi.org/10.1126/science.1210460 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017308662
    359 rdf:type schema:CreativeWork
    360 https://doi.org/10.1261/rna.031138.111 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029347734
    361 rdf:type schema:CreativeWork
     




    Preview window. Press ESC to close (or click here)


    ...