Ontology type: schema:ScholarlyArticle Open Access: True
2012-01
AUTHORSDebbie Montjean, Pierre De La Grange, David Gentien, Audrey Rapinat, Stéphanie Belloc, Paul Cohen-Bacrie, Yves Menezo, Moncef Benkhalifa
ABSTRACTPURPOSE: Investigate in what extent sperm transcriptome of infertile men is different from that of fertile individuals. METHODS: Semen samples were collected for determination of sperm parameters as well as for RNA isolation. Gene expression profile was investigated in spermatozoa of 8 infertile and 3 fertile men by microarray analysis using the Affymetrix Chip HG-U133 Plus 2.0. RESULT(S): We observed up to 33-fold reduction expression of genes involved in spermatogenesis and sperm motility. Furthermore, there is an important decrease in expression of genes involved in DNA repair as well as oxidative stress regulation. In this study, we also show a striking drop in expression of histone modification genes. CONCLUSION(S): We found that transcription profile in germ cells of men with idiopathic infertility is different from that of fertile individuals. Interestingly, about 15% of the regulated genes (Eddy Rev Reprod 4:23-30, 1999) play a role in spermatogenesis. More... »
PAGES3-10
http://scigraph.springernature.com/pub.10.1007/s10815-011-9644-3
DOIhttp://dx.doi.org/10.1007/s10815-011-9644-3
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1018633697
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/21989496
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Genetics",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "DNA Repair",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Gene Expression Regulation",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Humans",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Infertility, Male",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Male",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Oligonucleotide Array Sequence Analysis",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Oligospermia",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Oxidative Stress",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Sperm Motility",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Spermatogenesis",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Spermatozoa",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Transcriptome",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"name": [
"Advanced Technology Laboratory, ZA de l\u2019Agiot 4 rue Louis Lormand, 78320, Paris, La Verri\u00e8re, France",
"Laboratoire d\u2019Eylau, Unilabs, Paris, France"
],
"type": "Organization"
},
"familyName": "Montjean",
"givenName": "Debbie",
"id": "sg:person.0657153665.87",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0657153665.87"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"GenoSplice Technology, Paris, France"
],
"type": "Organization"
},
"familyName": "De La Grange",
"givenName": "Pierre",
"id": "sg:person.0621444377.10",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0621444377.10"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Institute Curie",
"id": "https://www.grid.ac/institutes/grid.418596.7",
"name": [
"Platform of Molecular Biology Facilities, Translational Research Department, Research center, Institut Curie, Paris, France"
],
"type": "Organization"
},
"familyName": "Gentien",
"givenName": "David",
"id": "sg:person.0735672777.57",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0735672777.57"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Institute Curie",
"id": "https://www.grid.ac/institutes/grid.418596.7",
"name": [
"Platform of Molecular Biology Facilities, Translational Research Department, Research center, Institut Curie, Paris, France"
],
"type": "Organization"
},
"familyName": "Rapinat",
"givenName": "Audrey",
"id": "sg:person.01052121377.22",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01052121377.22"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Laboratoire d\u2019Eylau, Unilabs, Paris, France"
],
"type": "Organization"
},
"familyName": "Belloc",
"givenName": "St\u00e9phanie",
"id": "sg:person.01226444715.38",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01226444715.38"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Laboratoire d\u2019Eylau, Unilabs, Paris, France"
],
"type": "Organization"
},
"familyName": "Cohen-Bacrie",
"givenName": "Paul",
"id": "sg:person.01321454061.00",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01321454061.00"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Laboratoire d\u2019Eylau, Unilabs, Paris, France"
],
"type": "Organization"
},
"familyName": "Menezo",
"givenName": "Yves",
"id": "sg:person.0107741266.43",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0107741266.43"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Advanced Technology Laboratory, ZA de l\u2019Agiot 4 rue Louis Lormand, 78320, Paris, La Verri\u00e8re, France",
"Laboratoire d\u2019Eylau, Unilabs, Paris, France"
],
"type": "Organization"
},
"familyName": "Benkhalifa",
"givenName": "Moncef",
"id": "sg:person.01073056063.93",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01073056063.93"
],
"type": "Person"
}
],
"citation": [
{
"id": "https://doi.org/10.1074/jbc.m109.066845",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002107407"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1091/mbc.e02-07-0391",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002733873"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/jcb.21756",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1003025897"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.semcdb.2003.09.021",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010087023"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s1472-6483(10)60454-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011089573"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1242/jcs.00975",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1012043849"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0140-6736(02)09899-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1012401940"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.fertnstert.2007.12.033",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1012580116"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/molehr/gah163",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013882446"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.rbmo.2010.06.022",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017504113"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.gyobfe.2009.04.003",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017582467"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/hmg/ddm012",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1022971766"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.rbmo.2010.09.013",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1024575917"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.fertnstert.2009.10.045",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025388414"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/molehr/gam093",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1030591985"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1101/gr.772403",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1030905286"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0140-6736(04)16256-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1032966113"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1095/biolreprod.101.002550",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035867291"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0378-1119(99)00324-8",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035869354"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.rbmo.2010.12.001",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1036232839"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2605.2009.01000.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037900677"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2605.2009.01000.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037900677"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/429154a",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038278786",
"https://doi.org/10.1038/429154a"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/429154a",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038278786",
"https://doi.org/10.1038/429154a"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/hmg/ddm187",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1040002330"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/gkg115",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1040195449"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/ejhg.2009.68",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1042927680",
"https://doi.org/10.1038/ejhg.2009.68"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00109-009-0485-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047181599",
"https://doi.org/10.1007/s00109-009-0485-9"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00109-009-0485-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047181599",
"https://doi.org/10.1007/s00109-009-0485-9"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00109-009-0485-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047181599",
"https://doi.org/10.1007/s00109-009-0485-9"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.rbmo.2010.12.009",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1048585234"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.bbrc.2006.03.208",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1049550533"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/molehr/gap056",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050322303"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/molehr/gap056",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050322303"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.bbrc.2004.04.160",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1053332779"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1530/ror.0.0040023",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1067730888"
],
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1077610954",
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/oxfordjournals.humrep.a138607",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1082569850"
],
"type": "CreativeWork"
}
],
"datePublished": "2012-01",
"datePublishedReg": "2012-01-01",
"description": "PURPOSE: Investigate in what extent sperm transcriptome of infertile men is different from that of fertile individuals.\nMETHODS: Semen samples were collected for determination of sperm parameters as well as for RNA isolation. Gene expression profile was investigated in spermatozoa of 8 infertile and 3 fertile men by microarray analysis using the Affymetrix Chip HG-U133 Plus 2.0.\nRESULT(S): We observed up to 33-fold reduction expression of genes involved in spermatogenesis and sperm motility. Furthermore, there is an important decrease in expression of genes involved in DNA repair as well as oxidative stress regulation. In this study, we also show a striking drop in expression of histone modification genes.\nCONCLUSION(S): We found that transcription profile in germ cells of men with idiopathic infertility is different from that of fertile individuals. Interestingly, about 15% of the regulated genes (Eddy Rev Reprod 4:23-30, 1999) play a role in spermatogenesis.",
"genre": "research_article",
"id": "sg:pub.10.1007/s10815-011-9644-3",
"inLanguage": [
"en"
],
"isAccessibleForFree": true,
"isPartOf": [
{
"id": "sg:journal.1095018",
"issn": [
"1058-0468",
"1573-7330"
],
"name": "Journal of Assisted Reproduction and Genetics",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "29"
}
],
"name": "Sperm transcriptome profiling in oligozoospermia",
"pagination": "3-10",
"productId": [
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"58c83caec2d619fd752358bebe15d52114f0a2bb50d896b4a47774744159b897"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"21989496"
]
},
{
"name": "nlm_unique_id",
"type": "PropertyValue",
"value": [
"9206495"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1007/s10815-011-9644-3"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1018633697"
]
}
],
"sameAs": [
"https://doi.org/10.1007/s10815-011-9644-3",
"https://app.dimensions.ai/details/publication/pub.1018633697"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-10T17:31",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8672_00000512.jsonl",
"type": "ScholarlyArticle",
"url": "http://link.springer.com/10.1007%2Fs10815-011-9644-3"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10815-011-9644-3'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10815-011-9644-3'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10815-011-9644-3'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10815-011-9644-3'
This table displays all metadata directly associated to this object as RDF triples.
281 TRIPLES
21 PREDICATES
74 URIs
33 LITERALS
21 BLANK NODES