Ontology type: schema:ScholarlyArticle
2008-10-14
AUTHORSL. P. Kiær, F. Felber, A. Flavell, R. Guadagnuolo, D. Guiatti, T. P. Hauser, A. M. Olivieri, I. Scotti, N. Syed, M. Vischi, C. van de Wiel, R. B. Jørgensen
ABSTRACTSpontaneous gene flow between wild and cultivated chicory, Cichorium intybus L., may have implications for the genetic structure and evolution of populations and varieties. One aspect of this crop-wild gene flow is the dispersal of transgenes from genetically modified varieties, e.g. gene flow from GM chicory to natural chicory could have unwanted consequences. With the purpose to identify and quantify crop-wild gene flow in chicory, we analysed introgression in 19 wild chicory populations and 16 accessions of chicory varieties and landraces distributed across Northern, Central and Mediterranean Europe. The analysis used 281 AFLP markers and 75 SSAP markers giving a total of 356 polymorphic markers. Results from model based assignments with the program STRUCTURE indicated many incidents of recent gene flow. Gene flow was observed both between cultivars and wild populations, between landraces and wild populations, between different wild populations as well as between cultivars. Population structure visualized by distance-based clustering showed a North–South geographical structuring of the wild populations, and a general grouping of the cultivars corresponding to known origin. The results indicated, however, that the structuring between the two groups of wild and cultivated types was weak. As crop and wild recipients are genetically close and genes are transferred between the two types rather frequently, focus on mitigating crop-wild gene flow should be increased, before transgenic varieties are cultivated openly. More... »
PAGES405-419
http://scigraph.springernature.com/pub.10.1007/s10722-008-9375-1
DOIhttp://dx.doi.org/10.1007/s10722-008-9375-1
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1048850378
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/10",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Technology",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1001",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Agricultural Biotechnology",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Biosystems Department, Ris\u00f8 National Laboratory, DTU, Frederiksborgvej 399, 4000, Roskilde, Denmark",
"id": "http://www.grid.ac/institutes/grid.5170.3",
"name": [
"Biosystems Department, Ris\u00f8 National Laboratory, DTU, Frederiksborgvej 399, 4000, Roskilde, Denmark"
],
"type": "Organization"
},
"familyName": "Ki\u00e6r",
"givenName": "L. P.",
"id": "sg:person.013136321131.96",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013136321131.96"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Institut de Biologie, Laboratoire de Botanique \u00c9volutive, Universit\u00e9 de Neuch\u00e2tel, Rue Emile-Argand 11, 2009, Neuchatel, Switzerland",
"id": "http://www.grid.ac/institutes/grid.10711.36",
"name": [
"Institut de Biologie, Laboratoire de Botanique \u00c9volutive, Universit\u00e9 de Neuch\u00e2tel, Rue Emile-Argand 11, 2009, Neuchatel, Switzerland"
],
"type": "Organization"
},
"familyName": "Felber",
"givenName": "F.",
"id": "sg:person.01261766625.25",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01261766625.25"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Division of Plant Sciences, University of Dundee at SCRI, Invergowrie, DD2 5DA, Dundee, Scotland, UK",
"id": "http://www.grid.ac/institutes/grid.8241.f",
"name": [
"Division of Plant Sciences, University of Dundee at SCRI, Invergowrie, DD2 5DA, Dundee, Scotland, UK"
],
"type": "Organization"
},
"familyName": "Flavell",
"givenName": "A.",
"id": "sg:person.0634576623.01",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0634576623.01"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy",
"id": "http://www.grid.ac/institutes/grid.5390.f",
"name": [
"Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy"
],
"type": "Organization"
},
"familyName": "Guadagnuolo",
"givenName": "R.",
"id": "sg:person.01265627725.51",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01265627725.51"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy",
"id": "http://www.grid.ac/institutes/grid.5390.f",
"name": [
"Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy"
],
"type": "Organization"
},
"familyName": "Guiatti",
"givenName": "D.",
"id": "sg:person.01062016705.37",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01062016705.37"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Department of Ecology, University of Copenhagen, Rolighedsvej 21, 1958, Frederiksberg C, Denmark",
"id": "http://www.grid.ac/institutes/grid.5254.6",
"name": [
"Department of Ecology, University of Copenhagen, Rolighedsvej 21, 1958, Frederiksberg C, Denmark"
],
"type": "Organization"
},
"familyName": "Hauser",
"givenName": "T. P.",
"id": "sg:person.0625001174.76",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0625001174.76"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy",
"id": "http://www.grid.ac/institutes/grid.5390.f",
"name": [
"Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy"
],
"type": "Organization"
},
"familyName": "Olivieri",
"givenName": "A. M.",
"id": "sg:person.013326726127.66",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013326726127.66"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Institut National de la Recherche Agronomique, National Agricultural Research Institute, UMR ECOFOG Campus Agronomique, BP 709 Avenue de France, 97387, Kourou Cedex, France",
"id": "http://www.grid.ac/institutes/None",
"name": [
"Institut National de la Recherche Agronomique, National Agricultural Research Institute, UMR ECOFOG Campus Agronomique, BP 709 Avenue de France, 97387, Kourou Cedex, France"
],
"type": "Organization"
},
"familyName": "Scotti",
"givenName": "I.",
"id": "sg:person.01032345662.28",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01032345662.28"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Division of Plant Sciences, University of Dundee at SCRI, Invergowrie, DD2 5DA, Dundee, Scotland, UK",
"id": "http://www.grid.ac/institutes/grid.8241.f",
"name": [
"Division of Plant Sciences, University of Dundee at SCRI, Invergowrie, DD2 5DA, Dundee, Scotland, UK"
],
"type": "Organization"
},
"familyName": "Syed",
"givenName": "N.",
"id": "sg:person.01124422171.40",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01124422171.40"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy",
"id": "http://www.grid.ac/institutes/grid.5390.f",
"name": [
"Dipartimento di Scienze Agrarie e Ambientali, University of Udine, Via delle Scienze 208, 33100, Udine, Italy"
],
"type": "Organization"
},
"familyName": "Vischi",
"givenName": "M.",
"id": "sg:person.0716627260.26",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0716627260.26"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Plant Research International, P.O. Box 16, 6700 AA, Wageningen, The Netherlands",
"id": "http://www.grid.ac/institutes/grid.4818.5",
"name": [
"Plant Research International, P.O. Box 16, 6700 AA, Wageningen, The Netherlands"
],
"type": "Organization"
},
"familyName": "van de Wiel",
"givenName": "C.",
"id": "sg:person.013042572727.73",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013042572727.73"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Biosystems Department, Ris\u00f8 National Laboratory, DTU, Frederiksborgvej 399, 4000, Roskilde, Denmark",
"id": "http://www.grid.ac/institutes/grid.5170.3",
"name": [
"Biosystems Department, Ris\u00f8 National Laboratory, DTU, Frederiksborgvej 399, 4000, Roskilde, Denmark"
],
"type": "Organization"
},
"familyName": "J\u00f8rgensen",
"givenName": "R. B.",
"id": "sg:person.01117272320.44",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01117272320.44"
],
"type": "Person"
}
],
"citation": [
{
"id": "sg:pub.10.1007/bf00033662",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1028310727",
"https://doi.org/10.1007/bf00033662"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00606-004-0272-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017059589",
"https://doi.org/10.1007/s00606-004-0272-6"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1023/a:1020672116652",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1001655384",
"https://doi.org/10.1023/a:1020672116652"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/sj.hdy.6800973",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1033642212",
"https://doi.org/10.1038/sj.hdy.6800973"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s001220051473",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035776881",
"https://doi.org/10.1007/s001220051473"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-003-1296-y",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010742041",
"https://doi.org/10.1007/s00122-003-1296-y"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nprot.2006.407",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1045165939",
"https://doi.org/10.1038/nprot.2006.407"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s10722-008-9354-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043972668",
"https://doi.org/10.1007/s10722-008-9354-6"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/978-3-642-73520-2_14",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002909687",
"https://doi.org/10.1007/978-3-642-73520-2_14"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-005-1948-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044889990",
"https://doi.org/10.1007/s00122-005-1948-1"
],
"type": "CreativeWork"
}
],
"datePublished": "2008-10-14",
"datePublishedReg": "2008-10-14",
"description": "Spontaneous gene flow between wild and cultivated chicory, Cichorium intybus L., may have implications for the genetic structure and evolution of populations and varieties. One aspect of this crop-wild gene flow is the dispersal of transgenes from genetically modified varieties, e.g. gene flow from GM chicory to natural chicory could have unwanted consequences. With the purpose to identify and quantify crop-wild gene flow in chicory, we analysed introgression in 19 wild chicory populations and 16 accessions of chicory varieties and landraces distributed across Northern, Central and Mediterranean Europe. The analysis used 281 AFLP markers and 75 SSAP markers giving a total of 356 polymorphic markers. Results from model based assignments with the program STRUCTURE indicated many incidents of recent gene flow. Gene flow was observed both between cultivars and wild populations, between landraces and wild populations, between different wild populations as well as between cultivars. Population structure visualized by distance-based clustering showed a North\u2013South geographical structuring of the wild populations, and a general grouping of the cultivars corresponding to known origin. The results indicated, however, that the structuring between the two groups of wild and cultivated types was weak. As crop and wild recipients are genetically close and genes are transferred between the two types rather frequently, focus on mitigating crop-wild gene flow should be increased, before transgenic varieties are cultivated openly.",
"genre": "article",
"id": "sg:pub.10.1007/s10722-008-9375-1",
"inLanguage": "en",
"isAccessibleForFree": false,
"isFundedItemOf": [
{
"id": "sg:grant.3757562",
"type": "MonetaryGrant"
}
],
"isPartOf": [
{
"id": "sg:journal.1023035",
"issn": [
"0925-9864",
"1573-5109"
],
"name": "Genetic Resources and Crop Evolution",
"publisher": "Springer Nature",
"type": "Periodical"
},
{
"issueNumber": "3",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "56"
}
],
"keywords": [
"crop-wild gene flow",
"Spontaneous gene flow",
"gene flow",
"wild populations",
"population structure",
"Cichorium intybus L.",
"dispersal of transgenes",
"recent gene flow",
"different wild populations",
"intybus L.",
"evolution of populations",
"geographical structuring",
"genetic structure",
"cultivated types",
"AFLP markers",
"transgenic varieties",
"SSAP markers",
"chicory varieties",
"polymorphic markers",
"wild recipient",
"cultivars",
"landraces",
"distance-based clustering",
"Mediterranean Europe",
"chicory",
"general groupings",
"L.",
"introgression",
"dispersal",
"markers",
"genes",
"accessions",
"structuring",
"population",
"transgene",
"crops",
"variety",
"evolution",
"structure",
"Northern",
"unwanted consequences",
"origin",
"types",
"grouping",
"consequences",
"clustering",
"Europe",
"analysis",
"results",
"implications",
"assignment",
"Central",
"aspects",
"total",
"group",
"flow",
"model",
"program structure",
"purpose",
"recipients",
"incidents",
"GM chicory",
"natural chicory",
"wild chicory populations",
"chicory populations",
"North\u2013South geographical structuring"
],
"name": "Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.",
"pagination": "405-419",
"productId": [
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1048850378"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1007/s10722-008-9375-1"
]
}
],
"sameAs": [
"https://doi.org/10.1007/s10722-008-9375-1",
"https://app.dimensions.ai/details/publication/pub.1048850378"
],
"sdDataset": "articles",
"sdDatePublished": "2022-01-01T18:17",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-springernature-scigraph/baseset/20220101/entities/gbq_results/article/article_458.jsonl",
"type": "ScholarlyArticle",
"url": "https://doi.org/10.1007/s10722-008-9375-1"
}
]Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10722-008-9375-1'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10722-008-9375-1'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10722-008-9375-1'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10722-008-9375-1'
This table displays all metadata directly associated to this object as RDF triples.
261 TRIPLES
22 PREDICATES
101 URIs
83 LITERALS
6 BLANK NODES