The species of Oxytropis DC. of section Gloeocephala Bunge (Fabaceae) from Northeast Asia: genetic diversity and relationships based on sequencing ... View Full Text


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Article Info

DATE

2022-02-25

AUTHORS

Alla Kholina, Marina Kozyrenko, Elena Artyukova, Valentin Yakubov, Mariya Khoreva, Elena Andrianova, Olga Mochalova, Denis Sandanov

ABSTRACT

Phylogenetic relationships within Oxytropis DC. sect. Gloeocephala Bunge from Northeast Asia were studied using plastid intergenic spacers (psbA–trnH + trnL–trnF + trnS–trnG) and ITS nrDNA. Populations of O. anadyrensis Vass., O. borealis DC., O. middendorffii Trautv., O. trautvetteri Meinsh., and O. vasskovskyi Jurtz. were monomorphic or characterised by a low level of chloroplast genetic diversity (h varied from 0.143 to 0.692, and π from 0.0001 to 0.0005). Presumably, the low genetic diversity was a result of the severe bottlenecks during Pleistocene glaciation-interglacial cycles. Twenty chlorotypes were identified; species studied had no shared chlorotypes. Chlorotypes of O. anadyrensis, O. borealis, and O. middendorffii formed two lineages each, while the chlorotypes of O. trautvetteri and O. vasskovskyi formed one separate lineage each in the phylogenetic network. There were specific diagnostic markers of cpDNA in each lineage, excluding O. vasskovskyi. The presence of a species-specific diagnostic marker in O. trautvetteri and specific markers in two lineages of O. anadyrensis support circumscribing these taxa as independent species. Regarding ITS nrDNA polymorphism, five ribotypes were detected. The differences revealed in plastid and nuclear genomes of Oxytropis sect. Gloeocephala confirmed that the Asian sector of Megaberingia was the main centre of diversification of arctic legumes. More... »

PAGES

117-128

References to SciGraph publications

  • 2021-03-12. Genetic diversity of Oxytropis section Xerobia (Fabaceae) in one of the centres of speciation in GENETICA
  • 2012-02-20. Phylogenetic relationships of Oxytropis chankaensis Jurtz. and Oxytropis oxyphylla (Pall.) DC. (Fabaceae) inferred from the data of sequencing of the ITS region of the nuclear ribosomal DNA operon and intergenic spacers of the chloroplast genome in RUSSIAN JOURNAL OF GENETICS
  • 1991-11. Universal primers for amplification of three non-coding regions of chloroplast DNA in PLANT MOLECULAR BIOLOGY
  • 2018-07-14. Modern State of Populations of Endemic Oxytropis Species from Baikal Siberia and Their Phylogenetic Relationships Based on Chloroplast DNA Markers in RUSSIAN JOURNAL OF GENETICS
  • 2021-03-01. Phylogeography and genetic structure of a subarctic-alpine shrub species, Alnus alnobetula (Ehrh.) K. Koch s. l., inferred from chloroplast DNA markers in TREE GENETICS & GENOMES
  • 2016-08. Phylogenetic relationships of the species of Oxytropis DC. subg. Oxytropis and Phacoxytropis (Fabaceae) from Asian Russia inferred from the nucleotide sequence analysis of the intergenic spacers of the chloroplast genome in RUSSIAN JOURNAL OF GENETICS
  • 2017-04-06. The demographic response of a deciduous shrub (the Indigofera bungeana complex, Fabaceae) to the Pleistocene climate changes in East Asia in SCIENTIFIC REPORTS
  • 2021-01. Variability of Chloroplast DNA in Oxytropis Section Polyadena (Fabaceae) from Asian Russia: Population Analysis and Phylogenetic Relationships in BIOLOGY BULLETIN
  • 2017-10-25. Molecular phylogeny and divergence times of Astragalus section Hymenostegis: An analysis of a rapidly diversifying species group in Fabaceae in SCIENTIFIC REPORTS
  • 2020-12. Phylogenetic Relationships of Oxytropis Section Arctobia of Northeast Asia according to Sequencing of the Intergenic Spacers of Chloroplast and ITS of Nuclear Genomes in RUSSIAN JOURNAL OF GENETICS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s10709-022-00152-y

    DOI

    http://dx.doi.org/10.1007/s10709-022-00152-y

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1145844897

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/35212865


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