Genetic diversity of Bradysia difformis (Sciaridae: Diptera) populations reflects movement of an invasive insect between forestry nurseries View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2010-04

AUTHORS

B. P. Hurley, B. Slippers, B. D. Wingfield, P. Govender, J. E. Smith, M. J. Wingfield

ABSTRACT

The fungus gnat, Bradysia difformis (Sciaridae: Diptera) has recently been recorded for the first time from South Africa where it has been found in forestry nurseries. The presence of this insect in all the major forestry nurseries as the dominant and only sciarid species raises intriguing questions regarding its origin and population genetic structure. A 395 bp portion of the mitochondrial COI gene was analysed from B. difformis individuals collected from four nursery populations in South Africa and three nursery populations in Europe. Shared haplotypes between South African and European populations indicated a historical connection. South African populations showed high genetic diversity and low genetic differentiation. These patterns most likely reflect multiple and/or relatively large introductions of B. difformis into South Africa from its origin combined with subsequent and continued movement of plants between nurseries. More... »

PAGES

729-733

Journal

TITLE

Biological Invasions

ISSUE

4

VOLUME

12

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10530-009-9509-1

DOI

http://dx.doi.org/10.1007/s10530-009-9509-1

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1016006327


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "University of Pretoria", 
          "id": "https://www.grid.ac/institutes/grid.49697.35", 
          "name": [
            "Department of Zoology and Entomology, University of Pretoria, 0002, Pretoria, South Africa", 
            "Forestry and Agricultural Biotechnology Institute, University of Pretoria, 0002, Pretoria, South Africa"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hurley", 
        "givenName": "B. P.", 
        "id": "sg:person.01321144717.54", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01321144717.54"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Pretoria", 
          "id": "https://www.grid.ac/institutes/grid.49697.35", 
          "name": [
            "Department of Genetics, University of Pretoria, 0002, Pretoria, South Africa", 
            "Forestry and Agricultural Biotechnology Institute, University of Pretoria, 0002, Pretoria, South Africa"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Slippers", 
        "givenName": "B.", 
        "id": "sg:person.0631641754.61", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0631641754.61"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Pretoria", 
          "id": "https://www.grid.ac/institutes/grid.49697.35", 
          "name": [
            "Department of Genetics, University of Pretoria, 0002, Pretoria, South Africa", 
            "Forestry and Agricultural Biotechnology Institute, University of Pretoria, 0002, Pretoria, South Africa"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wingfield", 
        "givenName": "B. D.", 
        "id": "sg:person.01173620303.80", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01173620303.80"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Pretoria", 
          "id": "https://www.grid.ac/institutes/grid.49697.35", 
          "name": [
            "Department of Zoology and Entomology, University of Pretoria, 0002, Pretoria, South Africa"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Govender", 
        "givenName": "P.", 
        "id": "sg:person.014014104051.70", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014014104051.70"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Warwick", 
          "id": "https://www.grid.ac/institutes/grid.7372.1", 
          "name": [
            "Warwick HRI, University of Warwick, CV4 7AL, Coventry, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Smith", 
        "givenName": "J. E.", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Pretoria", 
          "id": "https://www.grid.ac/institutes/grid.49697.35", 
          "name": [
            "Forestry and Agricultural Biotechnology Institute, University of Pretoria, 0002, Pretoria, South Africa"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wingfield", 
        "givenName": "M. J.", 
        "id": "sg:person.010703026062.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010703026062.09"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1046/j.1365-294x.2000.01020.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002156210"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1046/j.1365-3059.2002.00710.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005592090"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1603/0013-8746(2003)096[0448:bdfabo]2.0.co;2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019837652"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1439-0418.1994.tb00766.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028184545"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1439-0418.1994.tb00766.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028184545"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btg359", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030077759"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/25.24.4876", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041279110"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/25.17.3389", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047265454"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/aesa/87.6.651", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1059364332"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/jee/9.6.538", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1059782613"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1094/pd-78-0309", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060086377"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1077879113", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1177/117693430500100003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1092625821"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1177/117693430500100003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1092625821"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2010-04", 
    "datePublishedReg": "2010-04-01", 
    "description": "The fungus gnat, Bradysia difformis (Sciaridae: Diptera) has recently been recorded for the first time from South Africa where it has been found in forestry nurseries. The presence of this insect in all the major forestry nurseries as the dominant and only sciarid species raises intriguing questions regarding its origin and population genetic structure. A 395 bp portion of the mitochondrial COI gene was analysed from B. difformis individuals collected from four nursery populations in South Africa and three nursery populations in Europe. Shared haplotypes between South African and European populations indicated a historical connection. South African populations showed high genetic diversity and low genetic differentiation. These patterns most likely reflect multiple and/or relatively large introductions of B. difformis into South Africa from its origin combined with subsequent and continued movement of plants between nurseries.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s10530-009-9509-1", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1023142", 
        "issn": [
          "1387-3547", 
          "1573-1464"
        ], 
        "name": "Biological Invasions", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "4", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "12"
      }
    ], 
    "name": "Genetic diversity of Bradysia difformis (Sciaridae: Diptera) populations reflects movement of an invasive insect between forestry nurseries", 
    "pagination": "729-733", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "4c4421bb2fb53ca2270e34a31aea4a917372475090d56fe9a1a8f4dabff9b6bf"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s10530-009-9509-1"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1016006327"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s10530-009-9509-1", 
      "https://app.dimensions.ai/details/publication/pub.1016006327"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:25", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13068_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs10530-009-9509-1"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10530-009-9509-1'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10530-009-9509-1'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10530-009-9509-1'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10530-009-9509-1'


 

This table displays all metadata directly associated to this object as RDF triples.

135 TRIPLES      21 PREDICATES      39 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s10530-009-9509-1 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N1e8b6684484a448695e13a4b54ae62df
4 schema:citation https://app.dimensions.ai/details/publication/pub.1077879113
5 https://doi.org/10.1046/j.1365-294x.2000.01020.x
6 https://doi.org/10.1046/j.1365-3059.2002.00710.x
7 https://doi.org/10.1093/aesa/87.6.651
8 https://doi.org/10.1093/bioinformatics/btg359
9 https://doi.org/10.1093/jee/9.6.538
10 https://doi.org/10.1093/nar/25.17.3389
11 https://doi.org/10.1093/nar/25.24.4876
12 https://doi.org/10.1094/pd-78-0309
13 https://doi.org/10.1111/j.1439-0418.1994.tb00766.x
14 https://doi.org/10.1177/117693430500100003
15 https://doi.org/10.1603/0013-8746(2003)096[0448:bdfabo]2.0.co;2
16 schema:datePublished 2010-04
17 schema:datePublishedReg 2010-04-01
18 schema:description The fungus gnat, Bradysia difformis (Sciaridae: Diptera) has recently been recorded for the first time from South Africa where it has been found in forestry nurseries. The presence of this insect in all the major forestry nurseries as the dominant and only sciarid species raises intriguing questions regarding its origin and population genetic structure. A 395 bp portion of the mitochondrial COI gene was analysed from B. difformis individuals collected from four nursery populations in South Africa and three nursery populations in Europe. Shared haplotypes between South African and European populations indicated a historical connection. South African populations showed high genetic diversity and low genetic differentiation. These patterns most likely reflect multiple and/or relatively large introductions of B. difformis into South Africa from its origin combined with subsequent and continued movement of plants between nurseries.
19 schema:genre research_article
20 schema:inLanguage en
21 schema:isAccessibleForFree true
22 schema:isPartOf N515d96f0448949b6889f6413bed00ae1
23 Nf57669d9ef7244709b4b9eea39aeec96
24 sg:journal.1023142
25 schema:name Genetic diversity of Bradysia difformis (Sciaridae: Diptera) populations reflects movement of an invasive insect between forestry nurseries
26 schema:pagination 729-733
27 schema:productId N8378635ef16d4f5fae31f827d2058b7c
28 N86ac8279b5a3418fb4cdb07cc2fc19ec
29 Nb0716f9cb0bb45f0b660e52c4ffed157
30 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016006327
31 https://doi.org/10.1007/s10530-009-9509-1
32 schema:sdDatePublished 2019-04-11T14:25
33 schema:sdLicense https://scigraph.springernature.com/explorer/license/
34 schema:sdPublisher N5a485d16a799450096ce1cbbe2955bb0
35 schema:url http://link.springer.com/10.1007%2Fs10530-009-9509-1
36 sgo:license sg:explorer/license/
37 sgo:sdDataset articles
38 rdf:type schema:ScholarlyArticle
39 N02a8dd26e2b94b3a83ffa49d226730c7 rdf:first sg:person.0631641754.61
40 rdf:rest N413e3970a76f441ca2b9434d670ef6d5
41 N1e8b6684484a448695e13a4b54ae62df rdf:first sg:person.01321144717.54
42 rdf:rest N02a8dd26e2b94b3a83ffa49d226730c7
43 N3c6e6c850dbf4edebdee19b14ca4df30 rdf:first Nfd6726d154bf456290b2bcf39d8e86f2
44 rdf:rest Nc238b38de05746b7b7574280aa347cdd
45 N413e3970a76f441ca2b9434d670ef6d5 rdf:first sg:person.01173620303.80
46 rdf:rest Nabef4df9822b4ad086b8e21797d76b38
47 N515d96f0448949b6889f6413bed00ae1 schema:issueNumber 4
48 rdf:type schema:PublicationIssue
49 N5a485d16a799450096ce1cbbe2955bb0 schema:name Springer Nature - SN SciGraph project
50 rdf:type schema:Organization
51 N8378635ef16d4f5fae31f827d2058b7c schema:name doi
52 schema:value 10.1007/s10530-009-9509-1
53 rdf:type schema:PropertyValue
54 N86ac8279b5a3418fb4cdb07cc2fc19ec schema:name dimensions_id
55 schema:value pub.1016006327
56 rdf:type schema:PropertyValue
57 Nabef4df9822b4ad086b8e21797d76b38 rdf:first sg:person.014014104051.70
58 rdf:rest N3c6e6c850dbf4edebdee19b14ca4df30
59 Nb0716f9cb0bb45f0b660e52c4ffed157 schema:name readcube_id
60 schema:value 4c4421bb2fb53ca2270e34a31aea4a917372475090d56fe9a1a8f4dabff9b6bf
61 rdf:type schema:PropertyValue
62 Nc238b38de05746b7b7574280aa347cdd rdf:first sg:person.010703026062.09
63 rdf:rest rdf:nil
64 Nf57669d9ef7244709b4b9eea39aeec96 schema:volumeNumber 12
65 rdf:type schema:PublicationVolume
66 Nfd6726d154bf456290b2bcf39d8e86f2 schema:affiliation https://www.grid.ac/institutes/grid.7372.1
67 schema:familyName Smith
68 schema:givenName J. E.
69 rdf:type schema:Person
70 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
71 schema:name Biological Sciences
72 rdf:type schema:DefinedTerm
73 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
74 schema:name Genetics
75 rdf:type schema:DefinedTerm
76 sg:journal.1023142 schema:issn 1387-3547
77 1573-1464
78 schema:name Biological Invasions
79 rdf:type schema:Periodical
80 sg:person.010703026062.09 schema:affiliation https://www.grid.ac/institutes/grid.49697.35
81 schema:familyName Wingfield
82 schema:givenName M. J.
83 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010703026062.09
84 rdf:type schema:Person
85 sg:person.01173620303.80 schema:affiliation https://www.grid.ac/institutes/grid.49697.35
86 schema:familyName Wingfield
87 schema:givenName B. D.
88 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01173620303.80
89 rdf:type schema:Person
90 sg:person.01321144717.54 schema:affiliation https://www.grid.ac/institutes/grid.49697.35
91 schema:familyName Hurley
92 schema:givenName B. P.
93 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01321144717.54
94 rdf:type schema:Person
95 sg:person.014014104051.70 schema:affiliation https://www.grid.ac/institutes/grid.49697.35
96 schema:familyName Govender
97 schema:givenName P.
98 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014014104051.70
99 rdf:type schema:Person
100 sg:person.0631641754.61 schema:affiliation https://www.grid.ac/institutes/grid.49697.35
101 schema:familyName Slippers
102 schema:givenName B.
103 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0631641754.61
104 rdf:type schema:Person
105 https://app.dimensions.ai/details/publication/pub.1077879113 schema:CreativeWork
106 https://doi.org/10.1046/j.1365-294x.2000.01020.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1002156210
107 rdf:type schema:CreativeWork
108 https://doi.org/10.1046/j.1365-3059.2002.00710.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1005592090
109 rdf:type schema:CreativeWork
110 https://doi.org/10.1093/aesa/87.6.651 schema:sameAs https://app.dimensions.ai/details/publication/pub.1059364332
111 rdf:type schema:CreativeWork
112 https://doi.org/10.1093/bioinformatics/btg359 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030077759
113 rdf:type schema:CreativeWork
114 https://doi.org/10.1093/jee/9.6.538 schema:sameAs https://app.dimensions.ai/details/publication/pub.1059782613
115 rdf:type schema:CreativeWork
116 https://doi.org/10.1093/nar/25.17.3389 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047265454
117 rdf:type schema:CreativeWork
118 https://doi.org/10.1093/nar/25.24.4876 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041279110
119 rdf:type schema:CreativeWork
120 https://doi.org/10.1094/pd-78-0309 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060086377
121 rdf:type schema:CreativeWork
122 https://doi.org/10.1111/j.1439-0418.1994.tb00766.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1028184545
123 rdf:type schema:CreativeWork
124 https://doi.org/10.1177/117693430500100003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1092625821
125 rdf:type schema:CreativeWork
126 https://doi.org/10.1603/0013-8746(2003)096[0448:bdfabo]2.0.co;2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019837652
127 rdf:type schema:CreativeWork
128 https://www.grid.ac/institutes/grid.49697.35 schema:alternateName University of Pretoria
129 schema:name Department of Genetics, University of Pretoria, 0002, Pretoria, South Africa
130 Department of Zoology and Entomology, University of Pretoria, 0002, Pretoria, South Africa
131 Forestry and Agricultural Biotechnology Institute, University of Pretoria, 0002, Pretoria, South Africa
132 rdf:type schema:Organization
133 https://www.grid.ac/institutes/grid.7372.1 schema:alternateName University of Warwick
134 schema:name Warwick HRI, University of Warwick, CV4 7AL, Coventry, UK
135 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...