Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2009-09

AUTHORS

L. P. Yomano, S. W. York, K. T. Shanmugam, L. O. Ingram

ABSTRACT

The use of lignocellulose as a source of sugars for bioproducts requires the development of biocatalysts that maximize product yields by fermenting mixtures of hexose and pentose sugars to completion. In this study, we implicate mgsA encoding methylglyoxal synthase (and methylglyoxal) in the modulation of sugar metabolism. Deletion of this gene (strain LY168) resulted in the co-metabolism of glucose and xylose, and accelerated the metabolism of a 5-sugar mixture (mannose, glucose, arabinose, xylose and galactose) to ethanol. More... »

PAGES

1389-1398

References to SciGraph publications

  • 1999-06. Conversion of corn fiber to ethanol by recombinant E. coli strain FBR3 in JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
  • 2007-03. Low salt medium for lactate and ethanol production by recombinant Escherichia coli B in BIOTECHNOLOGY LETTERS
  • 2006-12. Co-utilization of L-arabinose and D-xylose by laboratory and industrial Saccharomyces cerevisiae strains in MICROBIAL CELL FACTORIES
  • 2003-12. Bacteria engineered for fuel ethanol production: current status in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2006-11. Alcoholic fermentation of carbon sources in biomass hydrolysates by Saccharomyces cerevisiae: current status in ANTONIE VAN LEEUWENHOEK
  • 1995-04. Improved strains of recombinant Escherichia coli for ethanol production from sugar mixtures in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2002-03. Cofermentation of glucose, xylose, and arabinose by genomic DNA-integrated xylose/arabinose fermenting strain of Zymomonas mobilis AX101 in APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
  • 2001-07. Use of catabolite repression mutants for fermentation of sugar mixtures to ethanol in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2006-10. Methylglyoxal Bypass Identified as Source of Chiral Contamination in l(+) and d(−)-lactate Fermentations by Recombinant Escherichia coli in BIOTECHNOLOGY LETTERS
  • 2005-12. Fermentation of 10% (w/v) Sugar to D(−)-Lactate by Engineered Escherichia coli B in BIOTECHNOLOGY LETTERS
  • 1999-04. Chemically defined media for commercial fermentations in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 1996-01. Ethanol production from hemicellulose hydrolysates of agricultural residues using genetically engineeredEscherichia coli strain KO11 in JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
  • 2008-12. Re-engineering Escherichia coli for ethanol production in BIOTECHNOLOGY LETTERS
  • 2008-08. Carbon catabolite repression in bacteria: many ways to make the most out of nutrients in NATURE REVIEWS MICROBIOLOGY
  • 2001-10. Characterization of sugar mixtures utilization by an Escherichia coli mutant devoid of the phosphotransferase system in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s10529-009-0011-8

    DOI

    http://dx.doi.org/10.1007/s10529-009-0011-8

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1017795005

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/19458924


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "about": [
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Biochemistry and Cell Biology", 
            "type": "DefinedTerm"
          }, 
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Biological Sciences", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Carbohydrate Metabolism", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Carbon-Oxygen Lyases", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "DNA, Bacterial", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Escherichia coli", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Escherichia coli Proteins", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Ethanol", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Gene Deletion", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Lignin", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Molecular Sequence Data", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Sequence Analysis, DNA", 
            "type": "DefinedTerm"
          }
        ], 
        "author": [
          {
            "affiliation": {
              "alternateName": "University of Florida", 
              "id": "https://www.grid.ac/institutes/grid.15276.37", 
              "name": [
                "Department of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Yomano", 
            "givenName": "L. P.", 
            "id": "sg:person.0716214756.77", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0716214756.77"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Florida", 
              "id": "https://www.grid.ac/institutes/grid.15276.37", 
              "name": [
                "Department of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "York", 
            "givenName": "S. W.", 
            "id": "sg:person.01317776571.63", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01317776571.63"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Florida", 
              "id": "https://www.grid.ac/institutes/grid.15276.37", 
              "name": [
                "Department of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Shanmugam", 
            "givenName": "K. T.", 
            "id": "sg:person.01160455435.97", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01160455435.97"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Florida", 
              "id": "https://www.grid.ac/institutes/grid.15276.37", 
              "name": [
                "Department of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Ingram", 
            "givenName": "L. O.", 
            "id": "sg:person.01220313432.17", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220313432.17"
            ], 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "sg:pub.10.1038/nrmicro1932", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1001013360", 
              "https://doi.org/10.1038/nrmicro1932"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/s1567-1356(03)00141-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1003426864"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/sj.jim.2900628", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1003780584", 
              "https://doi.org/10.1038/sj.jim.2900628"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.mib.2007.03.007", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1005998253"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s00253-003-1444-y", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1006952691", 
              "https://doi.org/10.1007/s00253-003-1444-y"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.95.4.1823", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1007251478"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1046/j.1365-2958.1998.00700.x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1008805724"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s002530051411", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1009576890", 
              "https://doi.org/10.1007/s002530051411"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-008-9821-3", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1009945652", 
              "https://doi.org/10.1007/s10529-008-9821-3"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-008-9821-3", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1009945652", 
              "https://doi.org/10.1007/s10529-008-9821-3"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00170625", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1012639739", 
              "https://doi.org/10.1007/bf00170625"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf00170625", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1012639739", 
              "https://doi.org/10.1007/bf00170625"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01569920", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1019100899", 
              "https://doi.org/10.1007/bf01569920"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01569920", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1019100899", 
              "https://doi.org/10.1007/bf01569920"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bp0001720", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1022469241"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1006/mben.2001.0186", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1023541896"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-006-9122-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1024890447", 
              "https://doi.org/10.1007/s10529-006-9122-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-006-9122-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1024890447", 
              "https://doi.org/10.1007/s10529-006-9122-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1021/bp050100e", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1025208599"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/aem.68.6.2651-2659.2002", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1028258548"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1385/abab:98-100:1-9:885", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1029506694", 
              "https://doi.org/10.1385/abab:98-100:1-9:885"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-006-9252-y", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030224518", 
              "https://doi.org/10.1007/s10529-006-9252-y"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-006-9252-y", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030224518", 
              "https://doi.org/10.1007/s10529-006-9252-y"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/bit.260380311", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030638137"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10482-006-9085-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1030662390", 
              "https://doi.org/10.1007/s10482-006-9085-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s002530100628", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031253667", 
              "https://doi.org/10.1007/s002530100628"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/aem.00924-08", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031368185"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/aem.71.7.3761-3769.2005", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1031844478"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-005-3899-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1032328145", 
              "https://doi.org/10.1007/s10529-005-3899-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s10529-005-3899-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1032328145", 
              "https://doi.org/10.1007/s10529-005-3899-7"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1002/(sici)1097-0290(19980420)58:2/3<204::aid-bit13>3.0.co;2-c", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1033085667"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.biortech.2005.01.018", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1035087634"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1073/pnas.120163297", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1039276805"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.jbiotec.2007.08.029", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1041325347"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1186/1475-2859-5-18", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1041956682", 
              "https://doi.org/10.1186/1475-2859-5-18"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1046/j.1365-2958.1998.00694.x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1044162997"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.femsyr.2005.04.004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1048983409"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.femsyr.2005.04.004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1048983409"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1046/j.1365-2958.1998.01035.x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1049784284"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1046/j.1365-2958.1998.01035.x", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1049784284"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/j.tibtech.2006.10.004", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1050174896"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/s002530100752", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1051780264", 
              "https://doi.org/10.1007/s002530100752"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/aem.02302-06", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1052851213"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/jb.169.6.2327-2335.1987", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1062716005"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/jb.179.13.4426-4428.1997", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1062726053"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1074548930", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1078182516", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1079210035", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1083254944", 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1083291925", 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "2009-09", 
        "datePublishedReg": "2009-09-01", 
        "description": "The use of lignocellulose as a source of sugars for bioproducts requires the development of biocatalysts that maximize product yields by fermenting mixtures of hexose and pentose sugars to completion. In this study, we implicate mgsA encoding methylglyoxal synthase (and methylglyoxal) in the modulation of sugar metabolism. Deletion of this gene (strain LY168) resulted in the co-metabolism of glucose and xylose, and accelerated the metabolism of a 5-sugar mixture (mannose, glucose, arabinose, xylose and galactose) to ethanol.", 
        "genre": "research_article", 
        "id": "sg:pub.10.1007/s10529-009-0011-8", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": true, 
        "isPartOf": [
          {
            "id": "sg:journal.1289037", 
            "issn": [
              "0951-208X", 
              "1573-6784"
            ], 
            "name": "Biotechnology Letters", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "9", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "31"
          }
        ], 
        "name": "Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli", 
        "pagination": "1389-1398", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "54c9700bec5e3f462822e685534207544352d8f9d314e1cfab0c384df22fd69a"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "19458924"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "8008051"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1007/s10529-009-0011-8"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1017795005"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1007/s10529-009-0011-8", 
          "https://app.dimensions.ai/details/publication/pub.1017795005"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-11T14:29", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13084_00000000.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2721133/"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10529-009-0011-8'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10529-009-0011-8'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10529-009-0011-8'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10529-009-0011-8'


     

    This table displays all metadata directly associated to this object as RDF triples.

    266 TRIPLES      21 PREDICATES      81 URIs      31 LITERALS      19 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1007/s10529-009-0011-8 schema:about N03924d17da664cf4ae77a7d1a58287e0
    2 N064b7ec0b777455b9584c5745f33cdbe
    3 N08cbbe630ae44c0ba98a2527b29d4a76
    4 N122a1170deb84df690562168d22feda2
    5 N22f791a39fc94f538ac55ec113e2b3f9
    6 N2cefb3d946bc4d289a4431a4e8b127cf
    7 N40fb7fbfb09343de82ab8d1a6013f314
    8 N93e5deed58b94dfd85c73c9fb32a20af
    9 Nd30162f27ce146a0a5b97b92cbf6e983
    10 Ne9915fa7c36242c9bc718e591b863591
    11 anzsrc-for:06
    12 anzsrc-for:0601
    13 schema:author Nd1c7e46f7f1845f4bd0156fc833832fd
    14 schema:citation sg:pub.10.1007/bf00170625
    15 sg:pub.10.1007/bf01569920
    16 sg:pub.10.1007/s00253-003-1444-y
    17 sg:pub.10.1007/s002530051411
    18 sg:pub.10.1007/s002530100628
    19 sg:pub.10.1007/s002530100752
    20 sg:pub.10.1007/s10482-006-9085-7
    21 sg:pub.10.1007/s10529-005-3899-7
    22 sg:pub.10.1007/s10529-006-9122-7
    23 sg:pub.10.1007/s10529-006-9252-y
    24 sg:pub.10.1007/s10529-008-9821-3
    25 sg:pub.10.1038/nrmicro1932
    26 sg:pub.10.1038/sj.jim.2900628
    27 sg:pub.10.1186/1475-2859-5-18
    28 sg:pub.10.1385/abab:98-100:1-9:885
    29 https://app.dimensions.ai/details/publication/pub.1074548930
    30 https://app.dimensions.ai/details/publication/pub.1078182516
    31 https://app.dimensions.ai/details/publication/pub.1079210035
    32 https://app.dimensions.ai/details/publication/pub.1083254944
    33 https://app.dimensions.ai/details/publication/pub.1083291925
    34 https://doi.org/10.1002/(sici)1097-0290(19980420)58:2/3<204::aid-bit13>3.0.co;2-c
    35 https://doi.org/10.1002/bit.260380311
    36 https://doi.org/10.1006/mben.2001.0186
    37 https://doi.org/10.1016/j.biortech.2005.01.018
    38 https://doi.org/10.1016/j.femsyr.2005.04.004
    39 https://doi.org/10.1016/j.jbiotec.2007.08.029
    40 https://doi.org/10.1016/j.mib.2007.03.007
    41 https://doi.org/10.1016/j.tibtech.2006.10.004
    42 https://doi.org/10.1016/s1567-1356(03)00141-7
    43 https://doi.org/10.1021/bp0001720
    44 https://doi.org/10.1021/bp050100e
    45 https://doi.org/10.1046/j.1365-2958.1998.00694.x
    46 https://doi.org/10.1046/j.1365-2958.1998.00700.x
    47 https://doi.org/10.1046/j.1365-2958.1998.01035.x
    48 https://doi.org/10.1073/pnas.120163297
    49 https://doi.org/10.1073/pnas.95.4.1823
    50 https://doi.org/10.1128/aem.00924-08
    51 https://doi.org/10.1128/aem.02302-06
    52 https://doi.org/10.1128/aem.68.6.2651-2659.2002
    53 https://doi.org/10.1128/aem.71.7.3761-3769.2005
    54 https://doi.org/10.1128/jb.169.6.2327-2335.1987
    55 https://doi.org/10.1128/jb.179.13.4426-4428.1997
    56 schema:datePublished 2009-09
    57 schema:datePublishedReg 2009-09-01
    58 schema:description The use of lignocellulose as a source of sugars for bioproducts requires the development of biocatalysts that maximize product yields by fermenting mixtures of hexose and pentose sugars to completion. In this study, we implicate mgsA encoding methylglyoxal synthase (and methylglyoxal) in the modulation of sugar metabolism. Deletion of this gene (strain LY168) resulted in the co-metabolism of glucose and xylose, and accelerated the metabolism of a 5-sugar mixture (mannose, glucose, arabinose, xylose and galactose) to ethanol.
    59 schema:genre research_article
    60 schema:inLanguage en
    61 schema:isAccessibleForFree true
    62 schema:isPartOf Nad289bd9701c47c1bdf1b89159662dc9
    63 Ndb1d483039394cafb462cc00d3957b52
    64 sg:journal.1289037
    65 schema:name Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli
    66 schema:pagination 1389-1398
    67 schema:productId N14e59ac3261a457fae6aec0b4342eafe
    68 N41d70bc1e2cc409b97a787e9fa0eb874
    69 N4c0d6675fbfa49e0be6939b7aa22065a
    70 Nec9275417c8243638641d6933fdbea05
    71 Nf662851643324067b1354b14f818d5b2
    72 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017795005
    73 https://doi.org/10.1007/s10529-009-0011-8
    74 schema:sdDatePublished 2019-04-11T14:29
    75 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    76 schema:sdPublisher Nc72c6c593e2c4bef9679f22a4db85261
    77 schema:url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2721133/
    78 sgo:license sg:explorer/license/
    79 sgo:sdDataset articles
    80 rdf:type schema:ScholarlyArticle
    81 N03924d17da664cf4ae77a7d1a58287e0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    82 schema:name Ethanol
    83 rdf:type schema:DefinedTerm
    84 N064b7ec0b777455b9584c5745f33cdbe schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    85 schema:name Molecular Sequence Data
    86 rdf:type schema:DefinedTerm
    87 N08cbbe630ae44c0ba98a2527b29d4a76 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    88 schema:name Escherichia coli Proteins
    89 rdf:type schema:DefinedTerm
    90 N122a1170deb84df690562168d22feda2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    91 schema:name Sequence Analysis, DNA
    92 rdf:type schema:DefinedTerm
    93 N14e59ac3261a457fae6aec0b4342eafe schema:name doi
    94 schema:value 10.1007/s10529-009-0011-8
    95 rdf:type schema:PropertyValue
    96 N22f791a39fc94f538ac55ec113e2b3f9 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    97 schema:name Carbon-Oxygen Lyases
    98 rdf:type schema:DefinedTerm
    99 N2cefb3d946bc4d289a4431a4e8b127cf schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    100 schema:name Carbohydrate Metabolism
    101 rdf:type schema:DefinedTerm
    102 N40fb7fbfb09343de82ab8d1a6013f314 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    103 schema:name Gene Deletion
    104 rdf:type schema:DefinedTerm
    105 N41d70bc1e2cc409b97a787e9fa0eb874 schema:name dimensions_id
    106 schema:value pub.1017795005
    107 rdf:type schema:PropertyValue
    108 N4c0d6675fbfa49e0be6939b7aa22065a schema:name pubmed_id
    109 schema:value 19458924
    110 rdf:type schema:PropertyValue
    111 N81ad67f7d9ec4831bda1caa48983886c rdf:first sg:person.01317776571.63
    112 rdf:rest Nd0dfea18d7144d688bdc812112778241
    113 N93e5deed58b94dfd85c73c9fb32a20af schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    114 schema:name DNA, Bacterial
    115 rdf:type schema:DefinedTerm
    116 Nad289bd9701c47c1bdf1b89159662dc9 schema:issueNumber 9
    117 rdf:type schema:PublicationIssue
    118 Nc72c6c593e2c4bef9679f22a4db85261 schema:name Springer Nature - SN SciGraph project
    119 rdf:type schema:Organization
    120 Nd0dfea18d7144d688bdc812112778241 rdf:first sg:person.01160455435.97
    121 rdf:rest Nd1693bbe42db4835a5cc206cf4bb5f6c
    122 Nd1693bbe42db4835a5cc206cf4bb5f6c rdf:first sg:person.01220313432.17
    123 rdf:rest rdf:nil
    124 Nd1c7e46f7f1845f4bd0156fc833832fd rdf:first sg:person.0716214756.77
    125 rdf:rest N81ad67f7d9ec4831bda1caa48983886c
    126 Nd30162f27ce146a0a5b97b92cbf6e983 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    127 schema:name Escherichia coli
    128 rdf:type schema:DefinedTerm
    129 Ndb1d483039394cafb462cc00d3957b52 schema:volumeNumber 31
    130 rdf:type schema:PublicationVolume
    131 Ne9915fa7c36242c9bc718e591b863591 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    132 schema:name Lignin
    133 rdf:type schema:DefinedTerm
    134 Nec9275417c8243638641d6933fdbea05 schema:name nlm_unique_id
    135 schema:value 8008051
    136 rdf:type schema:PropertyValue
    137 Nf662851643324067b1354b14f818d5b2 schema:name readcube_id
    138 schema:value 54c9700bec5e3f462822e685534207544352d8f9d314e1cfab0c384df22fd69a
    139 rdf:type schema:PropertyValue
    140 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
    141 schema:name Biological Sciences
    142 rdf:type schema:DefinedTerm
    143 anzsrc-for:0601 schema:inDefinedTermSet anzsrc-for:
    144 schema:name Biochemistry and Cell Biology
    145 rdf:type schema:DefinedTerm
    146 sg:journal.1289037 schema:issn 0951-208X
    147 1573-6784
    148 schema:name Biotechnology Letters
    149 rdf:type schema:Periodical
    150 sg:person.01160455435.97 schema:affiliation https://www.grid.ac/institutes/grid.15276.37
    151 schema:familyName Shanmugam
    152 schema:givenName K. T.
    153 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01160455435.97
    154 rdf:type schema:Person
    155 sg:person.01220313432.17 schema:affiliation https://www.grid.ac/institutes/grid.15276.37
    156 schema:familyName Ingram
    157 schema:givenName L. O.
    158 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220313432.17
    159 rdf:type schema:Person
    160 sg:person.01317776571.63 schema:affiliation https://www.grid.ac/institutes/grid.15276.37
    161 schema:familyName York
    162 schema:givenName S. W.
    163 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01317776571.63
    164 rdf:type schema:Person
    165 sg:person.0716214756.77 schema:affiliation https://www.grid.ac/institutes/grid.15276.37
    166 schema:familyName Yomano
    167 schema:givenName L. P.
    168 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0716214756.77
    169 rdf:type schema:Person
    170 sg:pub.10.1007/bf00170625 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012639739
    171 https://doi.org/10.1007/bf00170625
    172 rdf:type schema:CreativeWork
    173 sg:pub.10.1007/bf01569920 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019100899
    174 https://doi.org/10.1007/bf01569920
    175 rdf:type schema:CreativeWork
    176 sg:pub.10.1007/s00253-003-1444-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1006952691
    177 https://doi.org/10.1007/s00253-003-1444-y
    178 rdf:type schema:CreativeWork
    179 sg:pub.10.1007/s002530051411 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009576890
    180 https://doi.org/10.1007/s002530051411
    181 rdf:type schema:CreativeWork
    182 sg:pub.10.1007/s002530100628 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031253667
    183 https://doi.org/10.1007/s002530100628
    184 rdf:type schema:CreativeWork
    185 sg:pub.10.1007/s002530100752 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051780264
    186 https://doi.org/10.1007/s002530100752
    187 rdf:type schema:CreativeWork
    188 sg:pub.10.1007/s10482-006-9085-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030662390
    189 https://doi.org/10.1007/s10482-006-9085-7
    190 rdf:type schema:CreativeWork
    191 sg:pub.10.1007/s10529-005-3899-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032328145
    192 https://doi.org/10.1007/s10529-005-3899-7
    193 rdf:type schema:CreativeWork
    194 sg:pub.10.1007/s10529-006-9122-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024890447
    195 https://doi.org/10.1007/s10529-006-9122-7
    196 rdf:type schema:CreativeWork
    197 sg:pub.10.1007/s10529-006-9252-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1030224518
    198 https://doi.org/10.1007/s10529-006-9252-y
    199 rdf:type schema:CreativeWork
    200 sg:pub.10.1007/s10529-008-9821-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009945652
    201 https://doi.org/10.1007/s10529-008-9821-3
    202 rdf:type schema:CreativeWork
    203 sg:pub.10.1038/nrmicro1932 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001013360
    204 https://doi.org/10.1038/nrmicro1932
    205 rdf:type schema:CreativeWork
    206 sg:pub.10.1038/sj.jim.2900628 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003780584
    207 https://doi.org/10.1038/sj.jim.2900628
    208 rdf:type schema:CreativeWork
    209 sg:pub.10.1186/1475-2859-5-18 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041956682
    210 https://doi.org/10.1186/1475-2859-5-18
    211 rdf:type schema:CreativeWork
    212 sg:pub.10.1385/abab:98-100:1-9:885 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029506694
    213 https://doi.org/10.1385/abab:98-100:1-9:885
    214 rdf:type schema:CreativeWork
    215 https://app.dimensions.ai/details/publication/pub.1074548930 schema:CreativeWork
    216 https://app.dimensions.ai/details/publication/pub.1078182516 schema:CreativeWork
    217 https://app.dimensions.ai/details/publication/pub.1079210035 schema:CreativeWork
    218 https://app.dimensions.ai/details/publication/pub.1083254944 schema:CreativeWork
    219 https://app.dimensions.ai/details/publication/pub.1083291925 schema:CreativeWork
    220 https://doi.org/10.1002/(sici)1097-0290(19980420)58:2/3<204::aid-bit13>3.0.co;2-c schema:sameAs https://app.dimensions.ai/details/publication/pub.1033085667
    221 rdf:type schema:CreativeWork
    222 https://doi.org/10.1002/bit.260380311 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030638137
    223 rdf:type schema:CreativeWork
    224 https://doi.org/10.1006/mben.2001.0186 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023541896
    225 rdf:type schema:CreativeWork
    226 https://doi.org/10.1016/j.biortech.2005.01.018 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035087634
    227 rdf:type schema:CreativeWork
    228 https://doi.org/10.1016/j.femsyr.2005.04.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048983409
    229 rdf:type schema:CreativeWork
    230 https://doi.org/10.1016/j.jbiotec.2007.08.029 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041325347
    231 rdf:type schema:CreativeWork
    232 https://doi.org/10.1016/j.mib.2007.03.007 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005998253
    233 rdf:type schema:CreativeWork
    234 https://doi.org/10.1016/j.tibtech.2006.10.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050174896
    235 rdf:type schema:CreativeWork
    236 https://doi.org/10.1016/s1567-1356(03)00141-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003426864
    237 rdf:type schema:CreativeWork
    238 https://doi.org/10.1021/bp0001720 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022469241
    239 rdf:type schema:CreativeWork
    240 https://doi.org/10.1021/bp050100e schema:sameAs https://app.dimensions.ai/details/publication/pub.1025208599
    241 rdf:type schema:CreativeWork
    242 https://doi.org/10.1046/j.1365-2958.1998.00694.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1044162997
    243 rdf:type schema:CreativeWork
    244 https://doi.org/10.1046/j.1365-2958.1998.00700.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1008805724
    245 rdf:type schema:CreativeWork
    246 https://doi.org/10.1046/j.1365-2958.1998.01035.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1049784284
    247 rdf:type schema:CreativeWork
    248 https://doi.org/10.1073/pnas.120163297 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039276805
    249 rdf:type schema:CreativeWork
    250 https://doi.org/10.1073/pnas.95.4.1823 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007251478
    251 rdf:type schema:CreativeWork
    252 https://doi.org/10.1128/aem.00924-08 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031368185
    253 rdf:type schema:CreativeWork
    254 https://doi.org/10.1128/aem.02302-06 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052851213
    255 rdf:type schema:CreativeWork
    256 https://doi.org/10.1128/aem.68.6.2651-2659.2002 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028258548
    257 rdf:type schema:CreativeWork
    258 https://doi.org/10.1128/aem.71.7.3761-3769.2005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031844478
    259 rdf:type schema:CreativeWork
    260 https://doi.org/10.1128/jb.169.6.2327-2335.1987 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062716005
    261 rdf:type schema:CreativeWork
    262 https://doi.org/10.1128/jb.179.13.4426-4428.1997 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062726053
    263 rdf:type schema:CreativeWork
    264 https://www.grid.ac/institutes/grid.15276.37 schema:alternateName University of Florida
    265 schema:name Department of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 USA
    266 rdf:type schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...