Relation between phylogenetic position, lipid metabolism and butyrate production by different Butyrivibrio-like bacteria from the rumen View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2007-05

AUTHORS

Delphine Paillard, Nest McKain, Lal C. Chaudhary, Nicola D. Walker, Florian Pizette, Ingrid Koppova, Neil R. McEwan, Jan Kopečný, Philip E. Vercoe, Petra Louis, R. John Wallace

ABSTRACT

The Butyrivibrio group comprises Butyrivibrio fibrisolvens and related Gram-positive bacteria isolated mainly from the rumen of cattle and sheep. The aim of this study was to investigate phenotypic characteristics that discriminate between different phylotypes. The phylogenetic position, derived from 16S rDNA sequence data, of 45 isolates from different species and different countries was compared with their fermentation products, mechanism of butyrate formation, lipid metabolism and sensitivity to growth inhibition by linoleic acid (LA). Three clear sub-groups were evident, both phylogenetically and metabolically. Group VA1 typified most Butyrivibrio and Pseudobutyrivibrio isolates, while Groups VA2 and SA comprised Butyrivibrio hungatei and Clostridium proteoclasticum, respectively. All produced butyrate but strains of group VA1 had a butyrate kinase activity <40 U (mg protein)(-1), while strains in groups VA2 and SA all exhibited activities >600 U (mg protein)(-1). The butyrate kinase gene was present in all VA2 and SA bacteria tested but not in strains of group VA1, all of which were positive for the butyryl-CoA CoA-transferase gene. None of the bacteria tested possessed both genes. Lipase activity, measured by tributyrin hydrolysis, was high in group VA2 and SA strains and low in Group VA1 strains. Only the SA group formed stearic acid from LA. Linoleate isomerase activity, on the other hand, did not correspond with phylogenetic position. Group VA1 bacteria all grew in the presence of 200 microg LA ml(-1), while members of Groups VA2 and SA were inhibited by lower concentrations, some as low as 5 microg ml(-1). This information provides strong links between phenotypic and phylogenetic properties of this group of clostridial cluster XIVa Gram-positive bacteria. More... »

PAGES

417-422

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10482-006-9121-7

DOI

http://dx.doi.org/10.1007/s10482-006-9121-7

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1044768060

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/17077990


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0605", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Animals", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Butyrates", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Butyrivibrio", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Cattle", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Lipid Metabolism", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Ribosomal, 16S", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Rumen", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Sheep", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Paillard", 
        "givenName": "Delphine", 
        "id": "sg:person.01327776523.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01327776523.09"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McKain", 
        "givenName": "Nest", 
        "id": "sg:person.0611216224.29", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611216224.29"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Indian Veterinary Research Institute", 
          "id": "https://www.grid.ac/institutes/grid.417990.2", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK", 
            "Centre of Advanced Studies in Animal Nutrition, Indian Veterinary Research Institute, 243 122, Izatnagar, India"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Chaudhary", 
        "givenName": "Lal C.", 
        "id": "sg:person.0622451717.17", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0622451717.17"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK", 
            "Unit\u00e9 de Microbiologie, INRA de Clermont-Ferrand-Theix, 63122, St-Gen\u00e8s Champanelle, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Walker", 
        "givenName": "Nicola D.", 
        "id": "sg:person.01030162066.30", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01030162066.30"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Pizette", 
        "givenName": "Florian", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Animal Physiology and Genetics", 
          "id": "https://www.grid.ac/institutes/grid.435109.a", 
          "name": [
            "Institute of Animal Physiology & Genetics, Videnska 1083, 142 20, Prague 4, Krc, Czech Republic"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Koppova", 
        "givenName": "Ingrid", 
        "id": "sg:person.01102105147.32", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01102105147.32"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Wales", 
          "id": "https://www.grid.ac/institutes/grid.8155.9", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK", 
            "Institute of Rural Science, University of Wales, Llanbadarn Campus, SY23 3AL, Aberystwyth, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McEwan", 
        "givenName": "Neil R.", 
        "id": "sg:person.0612630542.47", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0612630542.47"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Animal Physiology and Genetics", 
          "id": "https://www.grid.ac/institutes/grid.435109.a", 
          "name": [
            "Institute of Animal Physiology & Genetics, Videnska 1083, 142 20, Prague 4, Krc, Czech Republic"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kope\u010dn\u00fd", 
        "givenName": "Jan", 
        "id": "sg:person.016253757233.66", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016253757233.66"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Western Australia", 
          "id": "https://www.grid.ac/institutes/grid.1012.2", 
          "name": [
            "Animal Science Group, University of Western Australia, 6009, Crawley, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Vercoe", 
        "givenName": "Philip E.", 
        "id": "sg:person.01341167071.86", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01341167071.86"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Louis", 
        "givenName": "Petra", 
        "id": "sg:person.0715265632.22", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0715265632.22"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Aberdeen", 
          "id": "https://www.grid.ac/institutes/grid.7107.1", 
          "name": [
            "Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wallace", 
        "givenName": "R. John", 
        "id": "sg:person.01363765111.07", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01363765111.07"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1111/j.1472-765x.1989.tb00278.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001500077"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2323/jgam.51.105", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002622933"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2323/jgam.51.105", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002622933"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1079/bjn20061783", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004605011"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-94-009-1453-7_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007603967", 
          "https://doi.org/10.1007/978-94-009-1453-7_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-94-009-1453-7_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007603967", 
          "https://doi.org/10.1007/978-94-009-1453-7_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1110591", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008274652"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1046/j.1472-765x.2003.01421.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014375672"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.186.7.2099-2106.2004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017876452"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0580-9517(08)70504-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028182913"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s002030050717", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034985038", 
          "https://doi.org/10.1007/s002030050717"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1472-765x.1995.tb00435.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042728813"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1574-6968.2006.00487.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048237958"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00261539", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048266028", 
          "https://doi.org/10.1007/bf00261539"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00261539", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048266028", 
          "https://doi.org/10.1007/bf00261539"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0076-6879(55)01102-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049651755"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1472-765x.1996.tb00069.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052700069"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00207713-26-2-238", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060347065"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00207713-46-1-195", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060349240"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00207713-46-2-559", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060349318"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00207713-46-3-753", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060349357"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00221287-131-10-2601", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060365523"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00221287-131-4-821", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060365690"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/ijs.0.02345-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060383364"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/mic.0.28412-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060397605"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1076346936", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1076524938", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1079567330", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1079732812", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1081234384", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1082009610", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1082811930", 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2007-05", 
    "datePublishedReg": "2007-05-01", 
    "description": "The Butyrivibrio group comprises Butyrivibrio fibrisolvens and related Gram-positive bacteria isolated mainly from the rumen of cattle and sheep. The aim of this study was to investigate phenotypic characteristics that discriminate between different phylotypes. The phylogenetic position, derived from 16S rDNA sequence data, of 45 isolates from different species and different countries was compared with their fermentation products, mechanism of butyrate formation, lipid metabolism and sensitivity to growth inhibition by linoleic acid (LA). Three clear sub-groups were evident, both phylogenetically and metabolically. Group VA1 typified most Butyrivibrio and Pseudobutyrivibrio isolates, while Groups VA2 and SA comprised Butyrivibrio hungatei and Clostridium proteoclasticum, respectively. All produced butyrate but strains of group VA1 had a butyrate kinase activity <40 U (mg protein)(-1), while strains in groups VA2 and SA all exhibited activities >600 U (mg protein)(-1). The butyrate kinase gene was present in all VA2 and SA bacteria tested but not in strains of group VA1, all of which were positive for the butyryl-CoA CoA-transferase gene. None of the bacteria tested possessed both genes. Lipase activity, measured by tributyrin hydrolysis, was high in group VA2 and SA strains and low in Group VA1 strains. Only the SA group formed stearic acid from LA. Linoleate isomerase activity, on the other hand, did not correspond with phylogenetic position. Group VA1 bacteria all grew in the presence of 200 microg LA ml(-1), while members of Groups VA2 and SA were inhibited by lower concentrations, some as low as 5 microg ml(-1). This information provides strong links between phenotypic and phylogenetic properties of this group of clostridial cluster XIVa Gram-positive bacteria.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s10482-006-9121-7", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.6887904", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1017348", 
        "issn": [
          "0003-6072", 
          "1572-9699"
        ], 
        "name": "Antonie van Leeuwenhoek", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "4", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "91"
      }
    ], 
    "name": "Relation between phylogenetic position, lipid metabolism and butyrate production by different Butyrivibrio-like bacteria from the rumen", 
    "pagination": "417-422", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "d53f2ab43c27360b5854ceb13e6ba566e11405706482f86dc27c6946b873174c"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "17077990"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "0372625"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s10482-006-9121-7"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1044768060"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s10482-006-9121-7", 
      "https://app.dimensions.ai/details/publication/pub.1044768060"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:28", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13078_00000001.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs10482-006-9121-7"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s10482-006-9121-7'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s10482-006-9121-7'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s10482-006-9121-7'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s10482-006-9121-7'


 

This table displays all metadata directly associated to this object as RDF triples.

278 TRIPLES      21 PREDICATES      68 URIs      31 LITERALS      19 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s10482-006-9121-7 schema:about N1e0b39ec3b6c438195a630a80042038e
2 N260b551d9d014ce583aa2639b04c066a
3 N40725acba298459db06d0fb4558e9523
4 N6aad2b51db0f4dfe948e752420a79807
5 N84723fc969974e0e89c15b9235f76a84
6 N9c61d82633d746d2a45b2e3ef54fbc94
7 Na149a35bada84bec9b1047d142d95fae
8 Na83f844f6a0c485b959b3d63a98ea001
9 Ndbe0e91fe1de46b1a7f6f10171af13f9
10 Nf216fa39bca244bc819ecfa32d4d60fc
11 anzsrc-for:06
12 anzsrc-for:0605
13 schema:author N000b74aab7b8419d88b8d3adbd27bf91
14 schema:citation sg:pub.10.1007/978-94-009-1453-7_2
15 sg:pub.10.1007/bf00261539
16 sg:pub.10.1007/s002030050717
17 https://app.dimensions.ai/details/publication/pub.1076346936
18 https://app.dimensions.ai/details/publication/pub.1076524938
19 https://app.dimensions.ai/details/publication/pub.1079567330
20 https://app.dimensions.ai/details/publication/pub.1079732812
21 https://app.dimensions.ai/details/publication/pub.1081234384
22 https://app.dimensions.ai/details/publication/pub.1082009610
23 https://app.dimensions.ai/details/publication/pub.1082811930
24 https://doi.org/10.1016/0076-6879(55)01102-6
25 https://doi.org/10.1016/s0580-9517(08)70504-x
26 https://doi.org/10.1046/j.1472-765x.2003.01421.x
27 https://doi.org/10.1079/bjn20061783
28 https://doi.org/10.1099/00207713-26-2-238
29 https://doi.org/10.1099/00207713-46-1-195
30 https://doi.org/10.1099/00207713-46-2-559
31 https://doi.org/10.1099/00207713-46-3-753
32 https://doi.org/10.1099/00221287-131-10-2601
33 https://doi.org/10.1099/00221287-131-4-821
34 https://doi.org/10.1099/ijs.0.02345-0
35 https://doi.org/10.1099/mic.0.28412-0
36 https://doi.org/10.1111/j.1472-765x.1989.tb00278.x
37 https://doi.org/10.1111/j.1472-765x.1995.tb00435.x
38 https://doi.org/10.1111/j.1472-765x.1996.tb00069.x
39 https://doi.org/10.1111/j.1574-6968.2006.00487.x
40 https://doi.org/10.1126/science.1110591
41 https://doi.org/10.1128/jb.186.7.2099-2106.2004
42 https://doi.org/10.2323/jgam.51.105
43 schema:datePublished 2007-05
44 schema:datePublishedReg 2007-05-01
45 schema:description The Butyrivibrio group comprises Butyrivibrio fibrisolvens and related Gram-positive bacteria isolated mainly from the rumen of cattle and sheep. The aim of this study was to investigate phenotypic characteristics that discriminate between different phylotypes. The phylogenetic position, derived from 16S rDNA sequence data, of 45 isolates from different species and different countries was compared with their fermentation products, mechanism of butyrate formation, lipid metabolism and sensitivity to growth inhibition by linoleic acid (LA). Three clear sub-groups were evident, both phylogenetically and metabolically. Group VA1 typified most Butyrivibrio and Pseudobutyrivibrio isolates, while Groups VA2 and SA comprised Butyrivibrio hungatei and Clostridium proteoclasticum, respectively. All produced butyrate but strains of group VA1 had a butyrate kinase activity <40 U (mg protein)(-1), while strains in groups VA2 and SA all exhibited activities >600 U (mg protein)(-1). The butyrate kinase gene was present in all VA2 and SA bacteria tested but not in strains of group VA1, all of which were positive for the butyryl-CoA CoA-transferase gene. None of the bacteria tested possessed both genes. Lipase activity, measured by tributyrin hydrolysis, was high in group VA2 and SA strains and low in Group VA1 strains. Only the SA group formed stearic acid from LA. Linoleate isomerase activity, on the other hand, did not correspond with phylogenetic position. Group VA1 bacteria all grew in the presence of 200 microg LA ml(-1), while members of Groups VA2 and SA were inhibited by lower concentrations, some as low as 5 microg ml(-1). This information provides strong links between phenotypic and phylogenetic properties of this group of clostridial cluster XIVa Gram-positive bacteria.
46 schema:genre research_article
47 schema:inLanguage en
48 schema:isAccessibleForFree false
49 schema:isPartOf N72488be4559d42fd830e20d32ded815f
50 Nb20f852bdf704aba975429ab40403578
51 sg:journal.1017348
52 schema:name Relation between phylogenetic position, lipid metabolism and butyrate production by different Butyrivibrio-like bacteria from the rumen
53 schema:pagination 417-422
54 schema:productId N37b4703ca5cc474186ed26c298f259be
55 N8954ad1872a64a16a9f653d77918933d
56 N985102cfdffb4bbfaa5e71efa37c2fac
57 Ncfd011ca9be44a86a728d55a74727603
58 Nf4c72ce40cdf4cd7b76d334b7c6b3671
59 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044768060
60 https://doi.org/10.1007/s10482-006-9121-7
61 schema:sdDatePublished 2019-04-11T14:28
62 schema:sdLicense https://scigraph.springernature.com/explorer/license/
63 schema:sdPublisher Na7a6a2ec86db4615b83c5988741bb7a5
64 schema:url http://link.springer.com/10.1007%2Fs10482-006-9121-7
65 sgo:license sg:explorer/license/
66 sgo:sdDataset articles
67 rdf:type schema:ScholarlyArticle
68 N000b74aab7b8419d88b8d3adbd27bf91 rdf:first sg:person.01327776523.09
69 rdf:rest N6b6923d8c689472f963810d48093f87e
70 N1e0b39ec3b6c438195a630a80042038e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
71 schema:name RNA, Ribosomal, 16S
72 rdf:type schema:DefinedTerm
73 N2409ba53d6ff4bf0999cca52c3dcb6f1 rdf:first sg:person.01030162066.30
74 rdf:rest N9bcc4b176f79402eab392c61931acc82
75 N260b551d9d014ce583aa2639b04c066a schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
76 schema:name Sheep
77 rdf:type schema:DefinedTerm
78 N3569d68cd99d4bd0a7a06a15e0c14549 rdf:first sg:person.01102105147.32
79 rdf:rest N546255d41d6d43ab9b9ba6a59eb0eaac
80 N37b4703ca5cc474186ed26c298f259be schema:name nlm_unique_id
81 schema:value 0372625
82 rdf:type schema:PropertyValue
83 N40725acba298459db06d0fb4558e9523 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
84 schema:name Rumen
85 rdf:type schema:DefinedTerm
86 N40ab681627d54a46890431d1195567a1 rdf:first sg:person.0715265632.22
87 rdf:rest Nee34137ae8c144de9e5a656e2065eb52
88 N4f72c690aeec4642bb7ef72c9422e71a schema:affiliation https://www.grid.ac/institutes/grid.7107.1
89 schema:familyName Pizette
90 schema:givenName Florian
91 rdf:type schema:Person
92 N546255d41d6d43ab9b9ba6a59eb0eaac rdf:first sg:person.0612630542.47
93 rdf:rest N77fea465170b4f5a8fa3658bdb5945fb
94 N6aad2b51db0f4dfe948e752420a79807 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
95 schema:name Lipid Metabolism
96 rdf:type schema:DefinedTerm
97 N6b6923d8c689472f963810d48093f87e rdf:first sg:person.0611216224.29
98 rdf:rest Nb1f26972cb1743788c07e80d34dcb0c0
99 N72488be4559d42fd830e20d32ded815f schema:volumeNumber 91
100 rdf:type schema:PublicationVolume
101 N77fea465170b4f5a8fa3658bdb5945fb rdf:first sg:person.016253757233.66
102 rdf:rest Nb4601fc8e94d4c45bb664370db022576
103 N84723fc969974e0e89c15b9235f76a84 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
104 schema:name Cattle
105 rdf:type schema:DefinedTerm
106 N8954ad1872a64a16a9f653d77918933d schema:name pubmed_id
107 schema:value 17077990
108 rdf:type schema:PropertyValue
109 N985102cfdffb4bbfaa5e71efa37c2fac schema:name doi
110 schema:value 10.1007/s10482-006-9121-7
111 rdf:type schema:PropertyValue
112 N9bcc4b176f79402eab392c61931acc82 rdf:first N4f72c690aeec4642bb7ef72c9422e71a
113 rdf:rest N3569d68cd99d4bd0a7a06a15e0c14549
114 N9c61d82633d746d2a45b2e3ef54fbc94 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
115 schema:name Animals
116 rdf:type schema:DefinedTerm
117 Na149a35bada84bec9b1047d142d95fae schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
118 schema:name Butyrivibrio
119 rdf:type schema:DefinedTerm
120 Na7a6a2ec86db4615b83c5988741bb7a5 schema:name Springer Nature - SN SciGraph project
121 rdf:type schema:Organization
122 Na83f844f6a0c485b959b3d63a98ea001 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
123 schema:name Phylogeny
124 rdf:type schema:DefinedTerm
125 Nb1f26972cb1743788c07e80d34dcb0c0 rdf:first sg:person.0622451717.17
126 rdf:rest N2409ba53d6ff4bf0999cca52c3dcb6f1
127 Nb20f852bdf704aba975429ab40403578 schema:issueNumber 4
128 rdf:type schema:PublicationIssue
129 Nb4601fc8e94d4c45bb664370db022576 rdf:first sg:person.01341167071.86
130 rdf:rest N40ab681627d54a46890431d1195567a1
131 Ncfd011ca9be44a86a728d55a74727603 schema:name readcube_id
132 schema:value d53f2ab43c27360b5854ceb13e6ba566e11405706482f86dc27c6946b873174c
133 rdf:type schema:PropertyValue
134 Ndbe0e91fe1de46b1a7f6f10171af13f9 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
135 schema:name Butyrates
136 rdf:type schema:DefinedTerm
137 Nee34137ae8c144de9e5a656e2065eb52 rdf:first sg:person.01363765111.07
138 rdf:rest rdf:nil
139 Nf216fa39bca244bc819ecfa32d4d60fc schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
140 schema:name RNA, Bacterial
141 rdf:type schema:DefinedTerm
142 Nf4c72ce40cdf4cd7b76d334b7c6b3671 schema:name dimensions_id
143 schema:value pub.1044768060
144 rdf:type schema:PropertyValue
145 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
146 schema:name Biological Sciences
147 rdf:type schema:DefinedTerm
148 anzsrc-for:0605 schema:inDefinedTermSet anzsrc-for:
149 schema:name Microbiology
150 rdf:type schema:DefinedTerm
151 sg:grant.6887904 http://pending.schema.org/fundedItem sg:pub.10.1007/s10482-006-9121-7
152 rdf:type schema:MonetaryGrant
153 sg:journal.1017348 schema:issn 0003-6072
154 1572-9699
155 schema:name Antonie van Leeuwenhoek
156 rdf:type schema:Periodical
157 sg:person.01030162066.30 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
158 schema:familyName Walker
159 schema:givenName Nicola D.
160 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01030162066.30
161 rdf:type schema:Person
162 sg:person.01102105147.32 schema:affiliation https://www.grid.ac/institutes/grid.435109.a
163 schema:familyName Koppova
164 schema:givenName Ingrid
165 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01102105147.32
166 rdf:type schema:Person
167 sg:person.01327776523.09 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
168 schema:familyName Paillard
169 schema:givenName Delphine
170 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01327776523.09
171 rdf:type schema:Person
172 sg:person.01341167071.86 schema:affiliation https://www.grid.ac/institutes/grid.1012.2
173 schema:familyName Vercoe
174 schema:givenName Philip E.
175 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01341167071.86
176 rdf:type schema:Person
177 sg:person.01363765111.07 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
178 schema:familyName Wallace
179 schema:givenName R. John
180 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01363765111.07
181 rdf:type schema:Person
182 sg:person.016253757233.66 schema:affiliation https://www.grid.ac/institutes/grid.435109.a
183 schema:familyName Kopečný
184 schema:givenName Jan
185 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016253757233.66
186 rdf:type schema:Person
187 sg:person.0611216224.29 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
188 schema:familyName McKain
189 schema:givenName Nest
190 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611216224.29
191 rdf:type schema:Person
192 sg:person.0612630542.47 schema:affiliation https://www.grid.ac/institutes/grid.8155.9
193 schema:familyName McEwan
194 schema:givenName Neil R.
195 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0612630542.47
196 rdf:type schema:Person
197 sg:person.0622451717.17 schema:affiliation https://www.grid.ac/institutes/grid.417990.2
198 schema:familyName Chaudhary
199 schema:givenName Lal C.
200 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0622451717.17
201 rdf:type schema:Person
202 sg:person.0715265632.22 schema:affiliation https://www.grid.ac/institutes/grid.7107.1
203 schema:familyName Louis
204 schema:givenName Petra
205 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0715265632.22
206 rdf:type schema:Person
207 sg:pub.10.1007/978-94-009-1453-7_2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007603967
208 https://doi.org/10.1007/978-94-009-1453-7_2
209 rdf:type schema:CreativeWork
210 sg:pub.10.1007/bf00261539 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048266028
211 https://doi.org/10.1007/bf00261539
212 rdf:type schema:CreativeWork
213 sg:pub.10.1007/s002030050717 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034985038
214 https://doi.org/10.1007/s002030050717
215 rdf:type schema:CreativeWork
216 https://app.dimensions.ai/details/publication/pub.1076346936 schema:CreativeWork
217 https://app.dimensions.ai/details/publication/pub.1076524938 schema:CreativeWork
218 https://app.dimensions.ai/details/publication/pub.1079567330 schema:CreativeWork
219 https://app.dimensions.ai/details/publication/pub.1079732812 schema:CreativeWork
220 https://app.dimensions.ai/details/publication/pub.1081234384 schema:CreativeWork
221 https://app.dimensions.ai/details/publication/pub.1082009610 schema:CreativeWork
222 https://app.dimensions.ai/details/publication/pub.1082811930 schema:CreativeWork
223 https://doi.org/10.1016/0076-6879(55)01102-6 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049651755
224 rdf:type schema:CreativeWork
225 https://doi.org/10.1016/s0580-9517(08)70504-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1028182913
226 rdf:type schema:CreativeWork
227 https://doi.org/10.1046/j.1472-765x.2003.01421.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1014375672
228 rdf:type schema:CreativeWork
229 https://doi.org/10.1079/bjn20061783 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004605011
230 rdf:type schema:CreativeWork
231 https://doi.org/10.1099/00207713-26-2-238 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060347065
232 rdf:type schema:CreativeWork
233 https://doi.org/10.1099/00207713-46-1-195 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060349240
234 rdf:type schema:CreativeWork
235 https://doi.org/10.1099/00207713-46-2-559 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060349318
236 rdf:type schema:CreativeWork
237 https://doi.org/10.1099/00207713-46-3-753 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060349357
238 rdf:type schema:CreativeWork
239 https://doi.org/10.1099/00221287-131-10-2601 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060365523
240 rdf:type schema:CreativeWork
241 https://doi.org/10.1099/00221287-131-4-821 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060365690
242 rdf:type schema:CreativeWork
243 https://doi.org/10.1099/ijs.0.02345-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060383364
244 rdf:type schema:CreativeWork
245 https://doi.org/10.1099/mic.0.28412-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060397605
246 rdf:type schema:CreativeWork
247 https://doi.org/10.1111/j.1472-765x.1989.tb00278.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1001500077
248 rdf:type schema:CreativeWork
249 https://doi.org/10.1111/j.1472-765x.1995.tb00435.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1042728813
250 rdf:type schema:CreativeWork
251 https://doi.org/10.1111/j.1472-765x.1996.tb00069.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1052700069
252 rdf:type schema:CreativeWork
253 https://doi.org/10.1111/j.1574-6968.2006.00487.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1048237958
254 rdf:type schema:CreativeWork
255 https://doi.org/10.1126/science.1110591 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008274652
256 rdf:type schema:CreativeWork
257 https://doi.org/10.1128/jb.186.7.2099-2106.2004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017876452
258 rdf:type schema:CreativeWork
259 https://doi.org/10.2323/jgam.51.105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002622933
260 rdf:type schema:CreativeWork
261 https://www.grid.ac/institutes/grid.1012.2 schema:alternateName University of Western Australia
262 schema:name Animal Science Group, University of Western Australia, 6009, Crawley, WA, Australia
263 rdf:type schema:Organization
264 https://www.grid.ac/institutes/grid.417990.2 schema:alternateName Indian Veterinary Research Institute
265 schema:name Centre of Advanced Studies in Animal Nutrition, Indian Veterinary Research Institute, 243 122, Izatnagar, India
266 Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK
267 rdf:type schema:Organization
268 https://www.grid.ac/institutes/grid.435109.a schema:alternateName Institute of Animal Physiology and Genetics
269 schema:name Institute of Animal Physiology & Genetics, Videnska 1083, 142 20, Prague 4, Krc, Czech Republic
270 rdf:type schema:Organization
271 https://www.grid.ac/institutes/grid.7107.1 schema:alternateName University of Aberdeen
272 schema:name Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK
273 Unité de Microbiologie, INRA de Clermont-Ferrand-Theix, 63122, St-Genès Champanelle, France
274 rdf:type schema:Organization
275 https://www.grid.ac/institutes/grid.8155.9 schema:alternateName University of Wales
276 schema:name Institute of Rural Science, University of Wales, Llanbadarn Campus, SY23 3AL, Aberystwyth, UK
277 Rowett Research Institute, Greenburn Road, AB21 9SB, Bucksburn, Aberdeen, UK
278 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...