A 3D Individual-Based Model to Study Effects of Chemotaxis, Competition and Diffusion on the Motile-Phytoplankton Aggregation View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2018-12

AUTHORS

Ilhem Bouderbala, Nadjia El Saadi, Alassane Bah, Pierre Auger

ABSTRACT

In this paper, we develop a 3D-individual-based model (IBM) to understand effect of various small-scale mechanisms in phytoplankton cells, on the cellular aggregation process. These mechanisms are: spatial interactions between cells due to their chemosensory abilities (chemotaxis), a molecular diffusion and a demographical process. The latter is considered as a branching process with a density-dependent death rate to take into account the local competition on resources. We implement the IBM and simulate various scenarios under real parameter values for phytoplankton cells. To quantify the effects of the different processes quoted above on the spatial and temporal distribution of phytoplankton, we used two spatial statistics: the Clark-Evans index and the group belonging percentage. Our simulation study highlights the role of the branching process with a weak-to-medium competition in reinforcing the aggregating structure that forms from attraction mechanisms (under suitable conditions for diffusion and attraction forces), and shows by contrast that aggregations cannot form when competition is high. More... »

PAGES

257-278

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10441-018-9318-y

DOI

http://dx.doi.org/10.1007/s10441-018-9318-y

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1101545117

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/29546657


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