Identification of drought tolerant progenies in tea by gene expression analysis View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2012-05-05

AUTHORS

Sushmita Gupta, Raju Bharalee, Priyadarshini Bhorali, Tirthankar Bandyopadhyay, Bornali Gohain, Niraj Agarwal, Parveen Ahmed, Hemanta Saikia, Sangeeta Borchetia, M. C. Kalita, A. K. Handique, Sudripta Das

ABSTRACT

Understanding the genes that govern tea plant (Camellia sinensis) architecture and response to drought stress is urgently needed to enhance breeding in tea with improved water use efficiency. Field drought is a slow mechanism and the plants go through an adaptive process in contrast to the drastic changes of rapid dehydration in case of controlled experiments. We identified a set of drought responsive genes under controlled condition using SSH, and validated the identified genes and their pattern of expression under field drought condition. The study was at three stages of water deficit stress viz., before wilting, wilting and recovery, which revealed a set of genes with higher expression at before wilting stage including dehydrin, abscissic acid ripening protein, glutathione peroxidase, cinnamoyl CoA reductase, calmodulin binding protein. The higher expression of these genes was related with increase tolerance character of DT/TS-463 before wilting, these five tolerant progenies could withstand drought stress and thus are candidates for breeding. We observed that physiological parameter like water use efficiency formed a close group with genes such as calmodulin related, DRM3, hexose transporter, hydrogen peroxide induced protein, ACC oxidase, lipase, ethylene responsive transcription factor and diaminopimelate decarboxylase, during wilting point. Our data provides valuable information for the gene components and the dynamics of gene expression in second and third leaf against drought stress in tea, which could be regarded as candidate targets potentially associated with drought tolerance. We propose that the identified five tolerant progenies on the basis of their drought tolerance can thus be utilised for future breeding programmes. More... »

PAGES

543-563

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10142-012-0277-0

DOI

http://dx.doi.org/10.1007/s10142-012-0277-0

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1012594434

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/22562548


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37 schema:description Understanding the genes that govern tea plant (Camellia sinensis) architecture and response to drought stress is urgently needed to enhance breeding in tea with improved water use efficiency. Field drought is a slow mechanism and the plants go through an adaptive process in contrast to the drastic changes of rapid dehydration in case of controlled experiments. We identified a set of drought responsive genes under controlled condition using SSH, and validated the identified genes and their pattern of expression under field drought condition. The study was at three stages of water deficit stress viz., before wilting, wilting and recovery, which revealed a set of genes with higher expression at before wilting stage including dehydrin, abscissic acid ripening protein, glutathione peroxidase, cinnamoyl CoA reductase, calmodulin binding protein. The higher expression of these genes was related with increase tolerance character of DT/TS-463 before wilting, these five tolerant progenies could withstand drought stress and thus are candidates for breeding. We observed that physiological parameter like water use efficiency formed a close group with genes such as calmodulin related, DRM3, hexose transporter, hydrogen peroxide induced protein, ACC oxidase, lipase, ethylene responsive transcription factor and diaminopimelate decarboxylase, during wilting point. Our data provides valuable information for the gene components and the dynamics of gene expression in second and third leaf against drought stress in tea, which could be regarded as candidate targets potentially associated with drought tolerance. We propose that the identified five tolerant progenies on the basis of their drought tolerance can thus be utilised for future breeding programmes.
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45 CoA reductase
46 DRM3
47 DT/TS-463
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50 abscissic acid
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54 architecture
55 basis
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59 calmodulin
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61 candidate targets
62 candidates
63 cases
64 changes
65 character
66 cinnamoyl-CoA reductase
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68 components
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70 contrast
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73 dehydration
74 dehydrins
75 drastic changes
76 drought
77 drought conditions
78 drought stress
79 drought tolerance
80 drought tolerant progenies
81 drought-responsive genes
82 dynamics
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85 expression
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87 factors
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90 future breeding programs
91 gene components
92 gene expression
93 gene expression analysis
94 genes
95 glutathione peroxidase
96 group
97 high expression
98 hydrogen peroxide induced protein
99 identification
100 improved water use efficiency
101 increase tolerance character
102 induced proteins
103 information
104 leaves
105 lipase
106 mechanism
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108 parameters
109 pattern of expression
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111 peroxidase
112 peroxide induced protein
113 physiological parameters
114 plant architecture
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