Reliability of Pseudomonas aeruginosa semi-automated rep-PCR genotyping in various epidemiological situations View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2009-09

AUTHORS

A. Doléans-Jordheim, B. Cournoyer, E. Bergeron, J. Croizé, H. Salord, J. André, M.-A. Mazoyer, F. N. R. Renaud, J. Freney

ABSTRACT

The purpose of this study was to evaluate the possibility of using a semi-automated repetitive DNA sequences-based polymerase chain reaction (rep-PCR) for typing Pseudomonas aeruginosa isolates. rep-PCR profiles obtained by the DiversiLab system of 84 P. aeruginosa isolates from distinct epidemiological situations were obtained. rep-PCR groupings were in good agreement with the origin of these isolates. Linked rep-PCR profiles were observed for isolates recovered from a same family of cystic fibrosis (CF) patients, for the etiological agents of clustered cases of nosocomial infections, and for some isolates recovered from a same hospital room. rep-PCR and pulsed-field gel electrophoresis SpeI restricted genomic DNA (PFGE-SpeI) profiles were compared. In a few instances, rep-PCR revealed genetic divergences among isolates of a same group of PFGE-SpeI profiles. These divergences could reflect genetic drifts among closely related isolates, as illustrated by those observed between clinical and environmental isolates of a same group of PFGE-SpeI profiles. The interpretation of such differences will require further studies, but the rep-PCR analysis of P. aeruginosa diversity appeared to be an appropriate method to investigate infra-specific genetic relatedness. More... »

PAGES

1105-1111

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s10096-009-0755-z

DOI

http://dx.doi.org/10.1007/s10096-009-0755-z

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1002377196

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/19449044


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