Charge sensitivity approach to mutual polarization of reactants: molecular mechanics perspective View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-10

AUTHORS

Anna Stachowicz, Marek Rogalski, Jacek Korchowiec

ABSTRACT

Charge sensitivity analysis (CSA) in force-field atoms resolution was applied to describe the mutual polarization of reactants as well as charge-transfer (CT) effects. An inclusion complex of β-cyclodextrin with salicylic acid was used as a model system. Three CSA models were taken into account and verified on a Born-Oppenheimer molecular dynamics (BOMD) trajectory. The models differed in terms of the equilibrium conditions imposed on the system. It was demonstrated that mutual polarization is an important source of stabilization, in contrast to the results obtained from static charge calculations. The energy lowering induced by CT was small and comparable to the CT stabilization that occurs in hydrogen-bonded systems. All models correctly described the main topological features of the BOMD energy surface. CSA in force-field atoms resolution qualitatively reproduced the charge reorganization accompanying hydrogen-bond formation. It was shown that CSA parameters are very sensitive to the bond formation process, which suggests that they could be applied in reactive force fields as detectors of newly formed chemical bonds. More... »

PAGES

4163-4172

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s00894-013-1757-4

DOI

http://dx.doi.org/10.1007/s00894-013-1757-4

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1033499622

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23392762


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