Changes in the bacterial populations of the highly alkaline saline soil of the former lake Texcoco (Mexico) following flooding View Full Text


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Article Info

DATE

2009-04-23

AUTHORS

César Valenzuela-Encinas, Isabel Neria-González, Rocio J. Alcántara-Hernández, Isabel Estrada-Alvarado, Francisco Javier Zavala-Díaz de la Serna, Luc Dendooven, Rodolfo Marsch

ABSTRACT

Flooding an extreme alkaline-saline soil decreased alkalinity and salinity, which will change the bacterial populations. Bacterial 16S rDNA libraries were generated of three soils with different electrolytic conductivity (EC), i.e. soil with EC 1.7 dS m−1 and pH 7.80 (LOW soil), with EC 56 dS m−1 and pH 10.11 (MEDIUM soil) and with EC 159 dS m−1 and pH 10.02 (HIGH soil), using universal bacterial oligonucleotide primers, and 463 clone 16S rDNA sequences were analyzed phylogenetically. Library proportions and clone identification of the phyla Proteobacteria, Actinobacteria, Acidobacteria, Cyanobacteria, Bacteroidetes, Firmicutes and Cloroflexi showed that the bacterial communities were different. Species and genera of the Rhizobiales, Rhodobacterales and Xanthomonadales orders of the α- and γ-subdivision of Proteobacteria were found at the three sites. Species and genera of the Rhodospirillales, Sphingobacteriales, Clostridiales, Oscillatoriales and Caldilineales were found only in the HIGH soil, Sphingomonadales, Burkholderiales and Pseudomonadales in the MEDIUM soil, Myxococcales in the LOW soil, and Actinomycetales in the MEDIUM and LOW soils. It was found that the largest diversity at the order and species level was found in the MEDIUM soil as bacteria of both the HIGH and LOW soils were found in it. More... »

PAGES

609-621

References to SciGraph publications

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  • 2007-09-09. Unique diversity of carotenoid-producing bacteria isolated from Misasa, a radioactive site in Japan in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2000-10. Chemical and biological characteristics of alkaline saline soils from the former Lake Texcoco as affected by artificial drainage in BIOLOGY AND FERTILITY OF SOILS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s00792-009-0244-4

    DOI

    http://dx.doi.org/10.1007/s00792-009-0244-4

    DIMENSIONS

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    https://www.ncbi.nlm.nih.gov/pubmed/19387766


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    37 schema:description Flooding an extreme alkaline-saline soil decreased alkalinity and salinity, which will change the bacterial populations. Bacterial 16S rDNA libraries were generated of three soils with different electrolytic conductivity (EC), i.e. soil with EC 1.7 dS m−1 and pH 7.80 (LOW soil), with EC 56 dS m−1 and pH 10.11 (MEDIUM soil) and with EC 159 dS m−1 and pH 10.02 (HIGH soil), using universal bacterial oligonucleotide primers, and 463 clone 16S rDNA sequences were analyzed phylogenetically. Library proportions and clone identification of the phyla Proteobacteria, Actinobacteria, Acidobacteria, Cyanobacteria, Bacteroidetes, Firmicutes and Cloroflexi showed that the bacterial communities were different. Species and genera of the Rhizobiales, Rhodobacterales and Xanthomonadales orders of the α- and γ-subdivision of Proteobacteria were found at the three sites. Species and genera of the Rhodospirillales, Sphingobacteriales, Clostridiales, Oscillatoriales and Caldilineales were found only in the HIGH soil, Sphingomonadales, Burkholderiales and Pseudomonadales in the MEDIUM soil, Myxococcales in the LOW soil, and Actinomycetales in the MEDIUM and LOW soils. It was found that the largest diversity at the order and species level was found in the MEDIUM soil as bacteria of both the HIGH and LOW soils were found in it.
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