Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2012-02

AUTHORS

Stephen J. Wylie, Hao Luo, Hua Li, Michael G. K. Jones

ABSTRACT

RNA extracted from 120 leaf specimens from 17 plant species was pooled, and polyadenylated RNA species were sequenced together without barcoding in one lane using massively parallel sequencing technology. After analysis, complete or partial genome sequences representing 20 virus isolates of 16 polyadenylated RNA species were identified. In three cases, 2-3 distinct isolates of a virus species co-infected the same plant. Twelve of the viruses identified were described previously and belonged to the genera Potyvirus, Nepovirus, Allexivirus, and Carlavirus. Four were unknown and are proposed as members of the genera Potyvirus, Sadwavirus, and Trichovirus. Virus sequences were subsequently matched to original host plants using RT-PCR assays. More... »

PAGES

271-284

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s00705-011-1166-x

DOI

http://dx.doi.org/10.1007/s00705-011-1166-x

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1015389738

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/22075920


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Viral", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Molecular Sequence Data", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Plants", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA Viruses", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Messenger", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "RNA, Viral", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wylie", 
        "givenName": "Stephen J.", 
        "id": "sg:person.01220764536.14", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220764536.14"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Luo", 
        "givenName": "Hao", 
        "id": "sg:person.01224124245.51", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01224124245.51"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li", 
        "givenName": "Hua", 
        "id": "sg:person.01335213136.20", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335213136.20"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Murdoch University", 
          "id": "https://www.grid.ac/institutes/grid.1025.6", 
          "name": [
            "Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Jones", 
        "givenName": "Michael G. K.", 
        "id": "sg:person.016427007024.24", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/s00705-008-0134-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000140388", 
          "https://doi.org/10.1007/s00705-008-0134-6"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-008-0134-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000140388", 
          "https://doi.org/10.1007/s00705-008-0134-6"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0014-5793(90)80175-i", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000566553"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-011-0963-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001201055", 
          "https://doi.org/10.1007/s00705-011-0963-6"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-011-0979-y", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003412352", 
          "https://doi.org/10.1007/s00705-011-0979-y"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jviromet.2009.08.009", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004290369"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2009.03.024", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005323433"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2009.02.028", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006609607"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-010-0670-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006767300", 
          "https://doi.org/10.1007/s00705-010-0670-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-010-0670-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006767300", 
          "https://doi.org/10.1007/s00705-010-0670-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10327-006-0304-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008637190", 
          "https://doi.org/10.1007/s10327-006-0304-x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10327-006-0304-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008637190", 
          "https://doi.org/10.1007/s10327-006-0304-x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1071/app9900046", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010247565", 
          "https://doi.org/10.1071/app9900046"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2010.01.023", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010675207"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-003-0234-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011846372", 
          "https://doi.org/10.1007/s00705-003-0234-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0050082", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011958085"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1744-7348.1986.tb05322.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012331799"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.phyto.45.062806.094401", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014409204"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10530-007-9138-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016424938", 
          "https://doi.org/10.1007/s10530-007-9138-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10530-007-9138-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016424938", 
          "https://doi.org/10.1007/s10530-007-9138-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1439-0434.2009.01601.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016572129"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1439-0434.2009.01601.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016572129"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0800468105", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017705749"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01310028", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024205422", 
          "https://doi.org/10.1007/bf01310028"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01310028", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024205422", 
          "https://doi.org/10.1007/bf01310028"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0014-5793(89)80109-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026719880"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-3059.2007.01653.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026757070"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2009.07.005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028315939"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s007050050271", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028514428", 
          "https://doi.org/10.1007/s007050050271"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jviromet.2006.01.017", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029605385"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0014-5793(94)01092-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029691400"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jviromet.2008.05.030", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032467807"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-010-0845-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1033611054", 
          "https://doi.org/10.1007/s00705-010-0845-3"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-003-0207-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037070971", 
          "https://doi.org/10.1007/s00705-003-0207-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-007-1015-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037512469", 
          "https://doi.org/10.1007/s00705-007-1015-0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-007-1015-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037512469", 
          "https://doi.org/10.1007/s00705-007-1015-0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jviromet.2008.06.001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038140603"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-009-0547-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039044044", 
          "https://doi.org/10.1007/s00705-009-0547-x"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-294x.2009.04470.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039638344"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-294x.2009.04470.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039638344"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-009-0367-z", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040189707", 
          "https://doi.org/10.1007/s00705-009-0367-z"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-004-0440-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041246410", 
          "https://doi.org/10.1007/s00705-004-0440-6"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-011-1002-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041325963", 
          "https://doi.org/10.1007/s00705-011-1002-3"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3186/jjphytopath.52.302", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043273805"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-004-0304-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043812721", 
          "https://doi.org/10.1007/s00705-004-0304-0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1364-3703.2009.00545.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044201320"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1364-3703.2009.00545.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044201320"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0040080", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046626850"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0040080", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046626850"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/25.17.3389", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047265454"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msr121", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049273973"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0911353107", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051091411"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.074492.107", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051720574"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jviromet.2010.01.022", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053201283"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1094/pd-72-0375", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060084377"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/0022-1317-72-10-2357", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060357728"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/0022-1317-73-1-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060358120"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/0022-1317-76-2-465", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060359550"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/3558334", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1070372064"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/j.1460-2075.1987.tb04716.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1079819476"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-02", 
    "datePublishedReg": "2012-02-01", 
    "description": "RNA extracted from 120 leaf specimens from 17 plant species was pooled, and polyadenylated RNA species were sequenced together without barcoding in one lane using massively parallel sequencing technology. After analysis, complete or partial genome sequences representing 20 virus isolates of 16 polyadenylated RNA species were identified. In three cases, 2-3 distinct isolates of a virus species co-infected the same plant. Twelve of the viruses identified were described previously and belonged to the genera Potyvirus, Nepovirus,                         Allexivirus, and Carlavirus. Four were unknown and are proposed as members of the genera Potyvirus, Sadwavirus, and Trichovirus. Virus sequences were subsequently matched to original host plants using RT-PCR assays.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s00705-011-1166-x", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.3565097", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1083335", 
        "issn": [
          "0304-8608", 
          "1432-8798"
        ], 
        "name": "Archives of Virology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "2", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "157"
      }
    ], 
    "name": "Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples", 
    "pagination": "271-284", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "49539ee0d92b875e6db98afd856624d213f90c8f290d20748cc164d4e65a18c9"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "22075920"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "7506870"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s00705-011-1166-x"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1015389738"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s00705-011-1166-x", 
      "https://app.dimensions.ai/details/publication/pub.1015389738"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T01:06", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8697_00000511.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs00705-011-1166-x"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s00705-011-1166-x'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s00705-011-1166-x'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s00705-011-1166-x'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s00705-011-1166-x'


 

This table displays all metadata directly associated to this object as RDF triples.

288 TRIPLES      21 PREDICATES      86 URIs      28 LITERALS      16 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s00705-011-1166-x schema:about N21c4b83d93f04eb4aa28d5a8d5664b71
2 N2e9a4d8899764a0c81189f4fad8a31f9
3 N4260e54e308c49dda3d1fb5b4369094d
4 N8e5c6c9184304328a50918778482c985
5 Ncb1d20864ad3449e8b9ccce06ad0705b
6 Nd2ae5f8818a045efad72392922007e4d
7 Ndd215206f7244ed8b4ae1c3c0627795d
8 anzsrc-for:06
9 anzsrc-for:0604
10 schema:author N2edec2e5f0834fed902d4f5e0884f197
11 schema:citation sg:pub.10.1007/bf01310028
12 sg:pub.10.1007/s00705-003-0207-5
13 sg:pub.10.1007/s00705-003-0234-2
14 sg:pub.10.1007/s00705-004-0304-0
15 sg:pub.10.1007/s00705-004-0440-6
16 sg:pub.10.1007/s00705-007-1015-0
17 sg:pub.10.1007/s00705-008-0134-6
18 sg:pub.10.1007/s00705-009-0367-z
19 sg:pub.10.1007/s00705-009-0547-x
20 sg:pub.10.1007/s00705-010-0670-8
21 sg:pub.10.1007/s00705-010-0845-3
22 sg:pub.10.1007/s00705-011-0963-6
23 sg:pub.10.1007/s00705-011-0979-y
24 sg:pub.10.1007/s00705-011-1002-3
25 sg:pub.10.1007/s007050050271
26 sg:pub.10.1007/s10327-006-0304-x
27 sg:pub.10.1007/s10530-007-9138-5
28 sg:pub.10.1071/app9900046
29 https://doi.org/10.1002/j.1460-2075.1987.tb04716.x
30 https://doi.org/10.1016/0014-5793(89)80109-7
31 https://doi.org/10.1016/0014-5793(90)80175-i
32 https://doi.org/10.1016/0014-5793(94)01092-7
33 https://doi.org/10.1016/j.jviromet.2006.01.017
34 https://doi.org/10.1016/j.jviromet.2008.05.030
35 https://doi.org/10.1016/j.jviromet.2008.06.001
36 https://doi.org/10.1016/j.jviromet.2009.08.009
37 https://doi.org/10.1016/j.jviromet.2010.01.022
38 https://doi.org/10.1016/j.virol.2009.02.028
39 https://doi.org/10.1016/j.virol.2009.03.024
40 https://doi.org/10.1016/j.virol.2009.07.005
41 https://doi.org/10.1016/j.virol.2010.01.023
42 https://doi.org/10.1073/pnas.0800468105
43 https://doi.org/10.1073/pnas.0911353107
44 https://doi.org/10.1093/molbev/msr121
45 https://doi.org/10.1093/nar/25.17.3389
46 https://doi.org/10.1094/pd-72-0375
47 https://doi.org/10.1099/0022-1317-72-10-2357
48 https://doi.org/10.1099/0022-1317-73-1-1
49 https://doi.org/10.1099/0022-1317-76-2-465
50 https://doi.org/10.1101/gr.074492.107
51 https://doi.org/10.1111/j.1364-3703.2009.00545.x
52 https://doi.org/10.1111/j.1365-294x.2009.04470.x
53 https://doi.org/10.1111/j.1365-3059.2007.01653.x
54 https://doi.org/10.1111/j.1439-0434.2009.01601.x
55 https://doi.org/10.1111/j.1744-7348.1986.tb05322.x
56 https://doi.org/10.1146/annurev.phyto.45.062806.094401
57 https://doi.org/10.1371/journal.pbio.0040080
58 https://doi.org/10.1371/journal.pbio.0050082
59 https://doi.org/10.2307/3558334
60 https://doi.org/10.3186/jjphytopath.52.302
61 schema:datePublished 2012-02
62 schema:datePublishedReg 2012-02-01
63 schema:description RNA extracted from 120 leaf specimens from 17 plant species was pooled, and polyadenylated RNA species were sequenced together without barcoding in one lane using massively parallel sequencing technology. After analysis, complete or partial genome sequences representing 20 virus isolates of 16 polyadenylated RNA species were identified. In three cases, 2-3 distinct isolates of a virus species co-infected the same plant. Twelve of the viruses identified were described previously and belonged to the genera Potyvirus, Nepovirus, Allexivirus, and Carlavirus. Four were unknown and are proposed as members of the genera Potyvirus, Sadwavirus, and Trichovirus. Virus sequences were subsequently matched to original host plants using RT-PCR assays.
64 schema:genre research_article
65 schema:inLanguage en
66 schema:isAccessibleForFree false
67 schema:isPartOf N1987148172f944168cccab416b2f3e7a
68 N8e87ae1d7ecd4eb0a2829132d0d1dd7b
69 sg:journal.1083335
70 schema:name Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples
71 schema:pagination 271-284
72 schema:productId N482a19d5fb924c6883dd536fc724cd0c
73 N5c2be46d9a524856bae81f7f8a657838
74 N6e85cd6bac074a8baf92db12744ca4d5
75 Nb069904961e74e308ef813ee90a4f43b
76 Ne00a94849c88484382ea6402d8fa38ad
77 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015389738
78 https://doi.org/10.1007/s00705-011-1166-x
79 schema:sdDatePublished 2019-04-11T01:06
80 schema:sdLicense https://scigraph.springernature.com/explorer/license/
81 schema:sdPublisher Nf895d0868db246089623a9904951b5d7
82 schema:url http://link.springer.com/10.1007%2Fs00705-011-1166-x
83 sgo:license sg:explorer/license/
84 sgo:sdDataset articles
85 rdf:type schema:ScholarlyArticle
86 N1987148172f944168cccab416b2f3e7a schema:issueNumber 2
87 rdf:type schema:PublicationIssue
88 N21c4b83d93f04eb4aa28d5a8d5664b71 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
89 schema:name RNA, Messenger
90 rdf:type schema:DefinedTerm
91 N265e316062674082a6701b8f96eecb04 rdf:first sg:person.016427007024.24
92 rdf:rest rdf:nil
93 N2e9a4d8899764a0c81189f4fad8a31f9 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
94 schema:name Genome, Viral
95 rdf:type schema:DefinedTerm
96 N2edec2e5f0834fed902d4f5e0884f197 rdf:first sg:person.01220764536.14
97 rdf:rest N440249dddfef486e8e43015642a54e46
98 N4260e54e308c49dda3d1fb5b4369094d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
99 schema:name Plants
100 rdf:type schema:DefinedTerm
101 N440249dddfef486e8e43015642a54e46 rdf:first sg:person.01224124245.51
102 rdf:rest Nb27f2803b3da41d2a9604eae84bdf2f9
103 N482a19d5fb924c6883dd536fc724cd0c schema:name pubmed_id
104 schema:value 22075920
105 rdf:type schema:PropertyValue
106 N5c2be46d9a524856bae81f7f8a657838 schema:name readcube_id
107 schema:value 49539ee0d92b875e6db98afd856624d213f90c8f290d20748cc164d4e65a18c9
108 rdf:type schema:PropertyValue
109 N6e85cd6bac074a8baf92db12744ca4d5 schema:name nlm_unique_id
110 schema:value 7506870
111 rdf:type schema:PropertyValue
112 N8e5c6c9184304328a50918778482c985 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
113 schema:name RNA, Viral
114 rdf:type schema:DefinedTerm
115 N8e87ae1d7ecd4eb0a2829132d0d1dd7b schema:volumeNumber 157
116 rdf:type schema:PublicationVolume
117 Nb069904961e74e308ef813ee90a4f43b schema:name doi
118 schema:value 10.1007/s00705-011-1166-x
119 rdf:type schema:PropertyValue
120 Nb27f2803b3da41d2a9604eae84bdf2f9 rdf:first sg:person.01335213136.20
121 rdf:rest N265e316062674082a6701b8f96eecb04
122 Ncb1d20864ad3449e8b9ccce06ad0705b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
123 schema:name Phylogeny
124 rdf:type schema:DefinedTerm
125 Nd2ae5f8818a045efad72392922007e4d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
126 schema:name RNA Viruses
127 rdf:type schema:DefinedTerm
128 Ndd215206f7244ed8b4ae1c3c0627795d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
129 schema:name Molecular Sequence Data
130 rdf:type schema:DefinedTerm
131 Ne00a94849c88484382ea6402d8fa38ad schema:name dimensions_id
132 schema:value pub.1015389738
133 rdf:type schema:PropertyValue
134 Nf895d0868db246089623a9904951b5d7 schema:name Springer Nature - SN SciGraph project
135 rdf:type schema:Organization
136 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
137 schema:name Biological Sciences
138 rdf:type schema:DefinedTerm
139 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
140 schema:name Genetics
141 rdf:type schema:DefinedTerm
142 sg:grant.3565097 http://pending.schema.org/fundedItem sg:pub.10.1007/s00705-011-1166-x
143 rdf:type schema:MonetaryGrant
144 sg:journal.1083335 schema:issn 0304-8608
145 1432-8798
146 schema:name Archives of Virology
147 rdf:type schema:Periodical
148 sg:person.01220764536.14 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
149 schema:familyName Wylie
150 schema:givenName Stephen J.
151 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01220764536.14
152 rdf:type schema:Person
153 sg:person.01224124245.51 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
154 schema:familyName Luo
155 schema:givenName Hao
156 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01224124245.51
157 rdf:type schema:Person
158 sg:person.01335213136.20 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
159 schema:familyName Li
160 schema:givenName Hua
161 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335213136.20
162 rdf:type schema:Person
163 sg:person.016427007024.24 schema:affiliation https://www.grid.ac/institutes/grid.1025.6
164 schema:familyName Jones
165 schema:givenName Michael G. K.
166 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24
167 rdf:type schema:Person
168 sg:pub.10.1007/bf01310028 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024205422
169 https://doi.org/10.1007/bf01310028
170 rdf:type schema:CreativeWork
171 sg:pub.10.1007/s00705-003-0207-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037070971
172 https://doi.org/10.1007/s00705-003-0207-5
173 rdf:type schema:CreativeWork
174 sg:pub.10.1007/s00705-003-0234-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011846372
175 https://doi.org/10.1007/s00705-003-0234-2
176 rdf:type schema:CreativeWork
177 sg:pub.10.1007/s00705-004-0304-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043812721
178 https://doi.org/10.1007/s00705-004-0304-0
179 rdf:type schema:CreativeWork
180 sg:pub.10.1007/s00705-004-0440-6 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041246410
181 https://doi.org/10.1007/s00705-004-0440-6
182 rdf:type schema:CreativeWork
183 sg:pub.10.1007/s00705-007-1015-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037512469
184 https://doi.org/10.1007/s00705-007-1015-0
185 rdf:type schema:CreativeWork
186 sg:pub.10.1007/s00705-008-0134-6 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000140388
187 https://doi.org/10.1007/s00705-008-0134-6
188 rdf:type schema:CreativeWork
189 sg:pub.10.1007/s00705-009-0367-z schema:sameAs https://app.dimensions.ai/details/publication/pub.1040189707
190 https://doi.org/10.1007/s00705-009-0367-z
191 rdf:type schema:CreativeWork
192 sg:pub.10.1007/s00705-009-0547-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1039044044
193 https://doi.org/10.1007/s00705-009-0547-x
194 rdf:type schema:CreativeWork
195 sg:pub.10.1007/s00705-010-0670-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006767300
196 https://doi.org/10.1007/s00705-010-0670-8
197 rdf:type schema:CreativeWork
198 sg:pub.10.1007/s00705-010-0845-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033611054
199 https://doi.org/10.1007/s00705-010-0845-3
200 rdf:type schema:CreativeWork
201 sg:pub.10.1007/s00705-011-0963-6 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001201055
202 https://doi.org/10.1007/s00705-011-0963-6
203 rdf:type schema:CreativeWork
204 sg:pub.10.1007/s00705-011-0979-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1003412352
205 https://doi.org/10.1007/s00705-011-0979-y
206 rdf:type schema:CreativeWork
207 sg:pub.10.1007/s00705-011-1002-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041325963
208 https://doi.org/10.1007/s00705-011-1002-3
209 rdf:type schema:CreativeWork
210 sg:pub.10.1007/s007050050271 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028514428
211 https://doi.org/10.1007/s007050050271
212 rdf:type schema:CreativeWork
213 sg:pub.10.1007/s10327-006-0304-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1008637190
214 https://doi.org/10.1007/s10327-006-0304-x
215 rdf:type schema:CreativeWork
216 sg:pub.10.1007/s10530-007-9138-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016424938
217 https://doi.org/10.1007/s10530-007-9138-5
218 rdf:type schema:CreativeWork
219 sg:pub.10.1071/app9900046 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010247565
220 https://doi.org/10.1071/app9900046
221 rdf:type schema:CreativeWork
222 https://doi.org/10.1002/j.1460-2075.1987.tb04716.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1079819476
223 rdf:type schema:CreativeWork
224 https://doi.org/10.1016/0014-5793(89)80109-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026719880
225 rdf:type schema:CreativeWork
226 https://doi.org/10.1016/0014-5793(90)80175-i schema:sameAs https://app.dimensions.ai/details/publication/pub.1000566553
227 rdf:type schema:CreativeWork
228 https://doi.org/10.1016/0014-5793(94)01092-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029691400
229 rdf:type schema:CreativeWork
230 https://doi.org/10.1016/j.jviromet.2006.01.017 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029605385
231 rdf:type schema:CreativeWork
232 https://doi.org/10.1016/j.jviromet.2008.05.030 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032467807
233 rdf:type schema:CreativeWork
234 https://doi.org/10.1016/j.jviromet.2008.06.001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038140603
235 rdf:type schema:CreativeWork
236 https://doi.org/10.1016/j.jviromet.2009.08.009 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004290369
237 rdf:type schema:CreativeWork
238 https://doi.org/10.1016/j.jviromet.2010.01.022 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053201283
239 rdf:type schema:CreativeWork
240 https://doi.org/10.1016/j.virol.2009.02.028 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006609607
241 rdf:type schema:CreativeWork
242 https://doi.org/10.1016/j.virol.2009.03.024 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005323433
243 rdf:type schema:CreativeWork
244 https://doi.org/10.1016/j.virol.2009.07.005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028315939
245 rdf:type schema:CreativeWork
246 https://doi.org/10.1016/j.virol.2010.01.023 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010675207
247 rdf:type schema:CreativeWork
248 https://doi.org/10.1073/pnas.0800468105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017705749
249 rdf:type schema:CreativeWork
250 https://doi.org/10.1073/pnas.0911353107 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051091411
251 rdf:type schema:CreativeWork
252 https://doi.org/10.1093/molbev/msr121 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049273973
253 rdf:type schema:CreativeWork
254 https://doi.org/10.1093/nar/25.17.3389 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047265454
255 rdf:type schema:CreativeWork
256 https://doi.org/10.1094/pd-72-0375 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060084377
257 rdf:type schema:CreativeWork
258 https://doi.org/10.1099/0022-1317-72-10-2357 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060357728
259 rdf:type schema:CreativeWork
260 https://doi.org/10.1099/0022-1317-73-1-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060358120
261 rdf:type schema:CreativeWork
262 https://doi.org/10.1099/0022-1317-76-2-465 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060359550
263 rdf:type schema:CreativeWork
264 https://doi.org/10.1101/gr.074492.107 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051720574
265 rdf:type schema:CreativeWork
266 https://doi.org/10.1111/j.1364-3703.2009.00545.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1044201320
267 rdf:type schema:CreativeWork
268 https://doi.org/10.1111/j.1365-294x.2009.04470.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1039638344
269 rdf:type schema:CreativeWork
270 https://doi.org/10.1111/j.1365-3059.2007.01653.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1026757070
271 rdf:type schema:CreativeWork
272 https://doi.org/10.1111/j.1439-0434.2009.01601.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1016572129
273 rdf:type schema:CreativeWork
274 https://doi.org/10.1111/j.1744-7348.1986.tb05322.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1012331799
275 rdf:type schema:CreativeWork
276 https://doi.org/10.1146/annurev.phyto.45.062806.094401 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014409204
277 rdf:type schema:CreativeWork
278 https://doi.org/10.1371/journal.pbio.0040080 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046626850
279 rdf:type schema:CreativeWork
280 https://doi.org/10.1371/journal.pbio.0050082 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011958085
281 rdf:type schema:CreativeWork
282 https://doi.org/10.2307/3558334 schema:sameAs https://app.dimensions.ai/details/publication/pub.1070372064
283 rdf:type schema:CreativeWork
284 https://doi.org/10.3186/jjphytopath.52.302 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043273805
285 rdf:type schema:CreativeWork
286 https://www.grid.ac/institutes/grid.1025.6 schema:alternateName Murdoch University
287 schema:name Plant Virology Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia
288 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...