Ontology type: schema:ScholarlyArticle Open Access: True
2022-03-02
AUTHORS ABSTRACTHigh-throughput cell type-specific multi-omic analyses have advanced our understanding of inner ear biology in an unprecedented way. The full benefit of these data, however, is reached from their re-use. Successful re-use of data requires identifying the natural users and ensuring proper data democratization and federation for their seamless and meaningful access. Here we discuss universal challenges in access and re-use of multi-omic data, possible solutions, and introduce the gEAR (the gene Expression Analysis Resource, umgear.org)—a tool for multi-omic data visualization, sharing and access for the ear field. More... »
PAGES319-322
http://scigraph.springernature.com/pub.10.1007/s00439-022-02445-w
DOIhttp://dx.doi.org/10.1007/s00439-022-02445-w
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1145980712
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/35235019
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/11",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Medical and Health Sciences",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Genetics",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1104",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Complementary and Alternative Medicine",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1114",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Paediatrics and Reproductive Medicine",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Genomics",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Hearing",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Humans",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Institute for Genome Sciences, University of Maryland School of Medicine, 21201, Baltimore, MD, USA",
"id": "http://www.grid.ac/institutes/grid.411024.2",
"name": [
"Department of Otorhinolaryngology Head and Neck Surgery, University of Maryland School of Medicine, 21201, Baltimore, MD, USA",
"Department of Anatomy and Neurobiology, University of Maryland School of Medicine, 21201, Baltimore, MD, USA",
"Institute for Genome Sciences, University of Maryland School of Medicine, 21201, Baltimore, MD, USA"
],
"type": "Organization"
},
"familyName": "Hertzano",
"givenName": "Ronna",
"id": "sg:person.01176562041.07",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01176562041.07"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Institute for Genome Sciences, University of Maryland School of Medicine, 21201, Baltimore, MD, USA",
"id": "http://www.grid.ac/institutes/grid.411024.2",
"name": [
"Institute for Genome Sciences, University of Maryland School of Medicine, 21201, Baltimore, MD, USA"
],
"type": "Organization"
},
"familyName": "Mahurkar",
"givenName": "Anup",
"id": "sg:person.01051370761.80",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01051370761.80"
],
"type": "Person"
}
],
"citation": [
{
"id": "sg:pub.10.1038/sdata.2016.18",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005603549",
"https://doi.org/10.1038/sdata.2016.18"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nmeth.3252",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050075164",
"https://doi.org/10.1038/nmeth.3252"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41597-020-00755-0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1132769801",
"https://doi.org/10.1038/s41597-020-00755-0"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41576-021-00370-8",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1138972733",
"https://doi.org/10.1038/s41576-021-00370-8"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41586-021-03950-0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1141641290",
"https://doi.org/10.1038/s41586-021-03950-0"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/ncomms9557",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1022219872",
"https://doi.org/10.1038/ncomms9557"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41597-020-0486-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1127592323",
"https://doi.org/10.1038/s41597-020-0486-7"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nature01262",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1039854529",
"https://doi.org/10.1038/nature01262"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00439-021-02374-0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1141561013",
"https://doi.org/10.1007/s00439-021-02374-0"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41586-018-0570-8",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1107501467",
"https://doi.org/10.1038/s41586-018-0570-8"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nbt.3838",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1084741166",
"https://doi.org/10.1038/nbt.3838"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/ncomms9549",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038505009",
"https://doi.org/10.1038/ncomms9549"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41592-021-01200-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1139145122",
"https://doi.org/10.1038/s41592-021-01200-9"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/s41586-018-0728-4",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1110065971",
"https://doi.org/10.1038/s41586-018-0728-4"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/978-1-4939-3578-9_5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1030632662",
"https://doi.org/10.1007/978-1-4939-3578-9_5"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/d41586-021-03822-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1144394076",
"https://doi.org/10.1038/d41586-021-03822-7"
],
"type": "CreativeWork"
}
],
"datePublished": "2022-03-02",
"datePublishedReg": "2022-03-02",
"description": "High-throughput cell type-specific multi-omic analyses have advanced our understanding of inner ear biology in an unprecedented way. The full benefit of these data, however, is reached from their re-use. Successful re-use of data requires identifying the natural users and ensuring proper data democratization and federation for their seamless and meaningful access. Here we discuss universal challenges in access and re-use of multi-omic data, possible solutions, and introduce the gEAR (the gene Expression Analysis Resource, umgear.org)\u2014a tool for multi-omic data visualization, sharing and access for the ear field.",
"genre": "article",
"id": "sg:pub.10.1007/s00439-022-02445-w",
"inLanguage": "en",
"isAccessibleForFree": true,
"isFundedItemOf": [
{
"id": "sg:grant.9643973",
"type": "MonetaryGrant"
},
{
"id": "sg:grant.3932082",
"type": "MonetaryGrant"
},
{
"id": "sg:grant.7753610",
"type": "MonetaryGrant"
}
],
"isPartOf": [
{
"id": "sg:journal.1085982",
"issn": [
"0340-6717",
"1432-1203"
],
"name": "Human Genetics",
"publisher": "Springer Nature",
"type": "Periodical"
},
{
"issueNumber": "3-4",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "141"
}
],
"keywords": [
"multi-omics data visualization",
"data visualization",
"natural users",
"data democratization",
"multi-omics data",
"analysis resources",
"possible solutions",
"meaningful access",
"full benefits",
"access",
"multi-omics analysis",
"inner ear biology",
"users",
"sharing",
"visualization",
"unprecedented ways",
"data",
"resources",
"tool",
"challenges",
"universal challenge",
"way",
"solution",
"discovery",
"biology",
"research",
"benefits",
"field",
"Federation",
"understanding",
"analysis",
"gear",
"democratization"
],
"name": "Advancing discovery in hearing research via biologist-friendly access to multi-omic data",
"pagination": "319-322",
"productId": [
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1145980712"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1007/s00439-022-02445-w"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"35235019"
]
}
],
"sameAs": [
"https://doi.org/10.1007/s00439-022-02445-w",
"https://app.dimensions.ai/details/publication/pub.1145980712"
],
"sdDataset": "articles",
"sdDatePublished": "2022-06-01T22:24",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-springernature-scigraph/baseset/20220601/entities/gbq_results/article/article_932.jsonl",
"type": "ScholarlyArticle",
"url": "https://doi.org/10.1007/s00439-022-02445-w"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s00439-022-02445-w'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s00439-022-02445-w'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s00439-022-02445-w'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s00439-022-02445-w'
This table displays all metadata directly associated to this object as RDF triples.
198 TRIPLES
22 PREDICATES
81 URIs
54 LITERALS
10 BLANK NODES