Characteristics of ammonia oxidation potentials and ammonia oxidizers in mineral soil under Salix polaris–moss vegetation in Ny-Ålesund, Svalbard View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2016-04

AUTHORS

Kentaro Hayashi, Yumi Shimomura, Sho Morimoto, Masaki Uchida, Takayuki Nakatsubo, Masahito Hayatsu

ABSTRACT

Although nitrification is a unique and important process in the nitrogen cycle with respect to ammonium consumption and nitrate production, limited information on this process is available for high-Arctic soils. We elucidated the ammonia oxidation potentials (AOPs) and characteristics of ammonia-oxidizing bacteria (AOB) and archaea (AOA) in mineral soils under climax vegetation, i.e., Salix polaris (polar willow)–moss vegetation, on a coastal hill in Ny-Ålesund, Svalbard. AOPs at 10 °C were determined by incubation with sufficient substrate (2 mM ammonium). The ammonia monooxygenase subunit A (amoA) genes of AOB and AOA were analyzed by using quantitative polymerase chain reaction and pyrosequencing. AOPs ranged from 1.1 to 14.1 ng N g−1 dry soil h−1—relatively low but of a similar order to the gross nitrification rates reported in another Svalbard study. AOP was positively correlated with thickness of the moss layer (P < 0.01), soil water content, and ammonium nitrogen content (P < 0.05). The population sizes of both AOB and AOA were not significantly related to AOP or edaphic factors. For AOB-amoA, six major operational taxonomic units (OTUs) were identified, all of which were classified into the Nitrosospira Mount Everest cluster. For AOA-amoA, six major OTUs were also identified, five of which were grouped with sequences from cold environments within clade A of the Nitrososphaera cluster, i.e., species known to have low, or no, AOP. It is, therefore, possible that the AOPs measured at the study site were driven mainly by psychrotolerant AOB. More... »

PAGES

725-741

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s00300-015-1829-2

DOI

http://dx.doi.org/10.1007/s00300-015-1829-2

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1044516324


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269 https://www.grid.ac/institutes/grid.410816.a schema:alternateName National Institute of Polar Research
270 schema:name National Institute of Polar Research, 10-3 Midoricho, 190-0014, Tachikawa, Tokyo, Japan
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272 https://www.grid.ac/institutes/grid.410826.9 schema:alternateName National Institute for Agro-Environmental Sciences
273 schema:name National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, 305-8604, Tsukuba, Ibaraki, Japan
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275 https://www.grid.ac/institutes/grid.419106.b schema:alternateName National Agricultural Research Center for Hokkaido Region
276 schema:name NARO Hokkaido Agricultural Research Center, 1 Hitsujigaoka, Toyohira, 062-8555, Sapporo, Hokkaido, Japan
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