Combination of Culture-Dependent and -Independent Methods Reveals Diverse Acyl Homoserine Lactone-Producers from Rhizosphere of Wetland Plants View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2013-12-27

AUTHORS

Yanhua Zeng, Zhiliang Yu, Yili Huang

ABSTRACT

The culture-dependent method and a degenerate primer-based culture-independent method were combined in an effort to identify N-acyl homoserine lactone (AHL) producers in rhizosphere of wetland plants, Salix babylonica (willow) and Phragmitesaustralis (reed). Overall, eight potential AHL-producing genera were found, which were Aeromonas, Pseudomonas, Polymorphum, Agrobacterium, Rhizobium, Sinorhizobium, Ensifer, and Pectobacterium. Thin layer chromatograph assay revealed various AHL profiles from cultivable AHL-producers. The degenerate primer pair RAHL352F and RAHL461R was found to cover AHL synthetase genes from families Rhizobiaceae and Rhodobacteraceae. Little overlap was found in taxa of potential AHL-producers obtained by the two methods, indicating that they were well complement to each other. This is the first survey for AHL-producers that employed combined culture-dependent and -independent methods. More... »

PAGES

587-593

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s00284-013-0513-4

DOI

http://dx.doi.org/10.1007/s00284-013-0513-4

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1007728182

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/24370628


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