Occurrence of lignin degradation genotypes and phenotypes among prokaryotes View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2014-12

AUTHORS

Jiang-Hao Tian, Anne-Marie Pourcher, Théodore Bouchez, Eric Gelhaye, Pascal Peu

ABSTRACT

A number of prokaryotes actively contribute to lignin degradation in nature and their activity could be of interest for many applications including the production of biogas/biofuel from lignocellulosic biomass and biopulping. This review compares the reliability and efficiency of the culture-dependent screening methods currently used for the isolation of ligninolytic prokaryotes. Isolated prokaryotes exhibiting lignin-degrading potential are presented according to their phylogenetic groups. With the development of bioinformatics, culture-independent techniques are emerging that allow larger-scale data mining for ligninolytic prokaryotic functions but today, these techniques still have some limits. In this work, two phylogenetic affiliations of isolated prokaryotes exhibiting ligninolytic potential and laccase-encoding prokaryotes were determined on the basis of 16S rDNA sequences, providing a comparative view of results obtained by the two types of screening techniques. The combination of laboratory culture and bioinformatics approaches is a promising way to explore lignin-degrading prokaryotes. More... »

PAGES

9527-9544

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  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s00253-014-6142-4

    DOI

    http://dx.doi.org/10.1007/s00253-014-6142-4

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1052535169

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/25343973


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