Towards a saturated sorghum map using RFLP and AFLP markers View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1999-02

AUTHORS

K. Boivin, M. Deu, J.-F. Rami, G. Trouche, P. Hamon

ABSTRACT

A near-saturated sorghum genetic linkage map was produced using RFLP, AFLP and morphological markers. First a composite, essentially RFLP-based genetic linkage map was obtained from analyses of two recombinant inbred populations. This map includes 343 loci for 11 linkage groups spanning 1352 cM. Since this map was constructed with many previously mapped heterologous probes, it offers a good basis for synteny studies. Separately, an AFLP map was obtained from the analysis of 168 bands revealed from 12 primer pair combinations. It includes 137 loci for 11 linkage groups spanning 849 cM. Taking into account the different data sets, we constructed a combined genetic linkage map including 443 loci spanning 1899 cM. Two main features are to be noted: (1) the distribution of AFLPs along the genome is not uniform; (2) an important stretching of the former core map is induced after adding the AFLPs. More... »

PAGES

320-328

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s001220051076

DOI

http://dx.doi.org/10.1007/s001220051076

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1019815274


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "name": [
            "CIRAD-CA, BP 5035, F-34032 Montpellier cedex, France, FR"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Boivin", 
        "givenName": "K.", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "CIRAD-CA, BP 5035, F-34032 Montpellier cedex, France, FR"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Deu", 
        "givenName": "M.", 
        "id": "sg:person.01023335211.07", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01023335211.07"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "RUSTICA PROGRAIN GENETIQUE, 7 rue herm\u00e8s, Parc technologique du canal, F-31520 Ramonville St-Agne, France, FR"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rami", 
        "givenName": "J.-F.", 
        "id": "sg:person.0677432145.45", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677432145.45"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "CIRAD/INERA, 01 BP596, Ougadougou, Burkina Faso, BF"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Trouche", 
        "givenName": "G.", 
        "id": "sg:person.010002563627.69", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010002563627.69"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Universit\u00e9 P Valery, route de Mende, F-34199 Montpellier cedex 5, France/CIRAD, BP 5035, Montpellier cedex, France, FR"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hamon", 
        "givenName": "P.", 
        "id": "sg:person.0653726260.70", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0653726260.70"
        ], 
        "type": "Person"
      }
    ], 
    "datePublished": "1999-02", 
    "datePublishedReg": "1999-02-01", 
    "description": "A near-saturated sorghum genetic linkage map was produced using RFLP, AFLP and morphological markers. First a composite, essentially RFLP-based genetic linkage map was obtained from analyses of two recombinant inbred populations. This map includes 343 loci for 11 linkage groups spanning 1352\u2004cM. Since this map was constructed with many previously mapped heterologous probes, it offers a good basis for synteny studies. Separately, an AFLP map was obtained from the analysis of 168 bands revealed from 12 primer pair combinations. It includes 137 loci for 11 linkage groups spanning 849\u2004cM. Taking into account the different data sets, we constructed a combined genetic linkage map including 443 loci spanning 1899\u2004cM. Two main features are to be noted: (1) the distribution of AFLPs along the genome is not uniform; (2) an important stretching of the former core map is induced after adding the AFLPs.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s001220051076", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1135804", 
        "issn": [
          "0040-5752", 
          "1432-2242"
        ], 
        "name": "Theoretical and Applied Genetics", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "2", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "98"
      }
    ], 
    "name": "Towards a saturated sorghum map using RFLP and AFLP markers", 
    "pagination": "320-328", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "5e693e020f1be0765c7d24e575ecb99182cf6bcf4cbe28ecdfc6f128b8891d2a"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s001220051076"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1019815274"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s001220051076", 
      "https://app.dimensions.ai/details/publication/pub.1019815274"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:30", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13093_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs001220051076"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s001220051076'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s001220051076'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s001220051076'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s001220051076'


 

This table displays all metadata directly associated to this object as RDF triples.

95 TRIPLES      20 PREDICATES      27 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s001220051076 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N8706fb4ecd8e462d83147308f3bb6156
4 schema:datePublished 1999-02
5 schema:datePublishedReg 1999-02-01
6 schema:description A near-saturated sorghum genetic linkage map was produced using RFLP, AFLP and morphological markers. First a composite, essentially RFLP-based genetic linkage map was obtained from analyses of two recombinant inbred populations. This map includes 343 loci for 11 linkage groups spanning 1352 cM. Since this map was constructed with many previously mapped heterologous probes, it offers a good basis for synteny studies. Separately, an AFLP map was obtained from the analysis of 168 bands revealed from 12 primer pair combinations. It includes 137 loci for 11 linkage groups spanning 849 cM. Taking into account the different data sets, we constructed a combined genetic linkage map including 443 loci spanning 1899 cM. Two main features are to be noted: (1) the distribution of AFLPs along the genome is not uniform; (2) an important stretching of the former core map is induced after adding the AFLPs.
7 schema:genre research_article
8 schema:inLanguage en
9 schema:isAccessibleForFree false
10 schema:isPartOf Na0f03ed6e890450bb825a88eaeb6e6ab
11 Nfe4fbcda5463449189b94f31c1c85a74
12 sg:journal.1135804
13 schema:name Towards a saturated sorghum map using RFLP and AFLP markers
14 schema:pagination 320-328
15 schema:productId N6440db09056149e89aed3ea4d05afa81
16 Ne6d4567a421649049c0dca62c315952d
17 Nff14f93edd7540049c28c7c4a8a854ce
18 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019815274
19 https://doi.org/10.1007/s001220051076
20 schema:sdDatePublished 2019-04-11T14:30
21 schema:sdLicense https://scigraph.springernature.com/explorer/license/
22 schema:sdPublisher Nf96ccabed5184dad9922d214862cd807
23 schema:url http://link.springer.com/10.1007%2Fs001220051076
24 sgo:license sg:explorer/license/
25 sgo:sdDataset articles
26 rdf:type schema:ScholarlyArticle
27 N26133f934ffa4679ba3ac23d7cf663cd schema:name CIRAD-CA, BP 5035, F-34032 Montpellier cedex, France, FR
28 rdf:type schema:Organization
29 N2c879d5140f445cf86f3195546a7ddbb schema:name Université P Valery, route de Mende, F-34199 Montpellier cedex 5, France/CIRAD, BP 5035, Montpellier cedex, France, FR
30 rdf:type schema:Organization
31 N31f9fa79e2944e2daa40dab447ff76e3 rdf:first sg:person.0653726260.70
32 rdf:rest rdf:nil
33 N440772ada7b24b42823b046ecf6180d7 schema:name CIRAD-CA, BP 5035, F-34032 Montpellier cedex, France, FR
34 rdf:type schema:Organization
35 N44ae395f10dd483d947d777f5be35488 schema:affiliation N440772ada7b24b42823b046ecf6180d7
36 schema:familyName Boivin
37 schema:givenName K.
38 rdf:type schema:Person
39 N6440db09056149e89aed3ea4d05afa81 schema:name readcube_id
40 schema:value 5e693e020f1be0765c7d24e575ecb99182cf6bcf4cbe28ecdfc6f128b8891d2a
41 rdf:type schema:PropertyValue
42 N8706fb4ecd8e462d83147308f3bb6156 rdf:first N44ae395f10dd483d947d777f5be35488
43 rdf:rest Ne92598e25d904208bb9d37b18f174d00
44 N8952fa9df01d45498a85c31b1c05f231 rdf:first sg:person.010002563627.69
45 rdf:rest N31f9fa79e2944e2daa40dab447ff76e3
46 N8a3e955e6c6f461eae2568f39b5c5125 schema:name RUSTICA PROGRAIN GENETIQUE, 7 rue hermès, Parc technologique du canal, F-31520 Ramonville St-Agne, France, FR
47 rdf:type schema:Organization
48 N9d5d3d356c1540f1aa97ac5cb0c4e5dd rdf:first sg:person.0677432145.45
49 rdf:rest N8952fa9df01d45498a85c31b1c05f231
50 Na0f03ed6e890450bb825a88eaeb6e6ab schema:issueNumber 2
51 rdf:type schema:PublicationIssue
52 Ne6d4567a421649049c0dca62c315952d schema:name doi
53 schema:value 10.1007/s001220051076
54 rdf:type schema:PropertyValue
55 Ne92598e25d904208bb9d37b18f174d00 rdf:first sg:person.01023335211.07
56 rdf:rest N9d5d3d356c1540f1aa97ac5cb0c4e5dd
57 Nf96ccabed5184dad9922d214862cd807 schema:name Springer Nature - SN SciGraph project
58 rdf:type schema:Organization
59 Nfe464a82ca954ca1a3374090bc01a912 schema:name CIRAD/INERA, 01 BP596, Ougadougou, Burkina Faso, BF
60 rdf:type schema:Organization
61 Nfe4fbcda5463449189b94f31c1c85a74 schema:volumeNumber 98
62 rdf:type schema:PublicationVolume
63 Nff14f93edd7540049c28c7c4a8a854ce schema:name dimensions_id
64 schema:value pub.1019815274
65 rdf:type schema:PropertyValue
66 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
67 schema:name Biological Sciences
68 rdf:type schema:DefinedTerm
69 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
70 schema:name Genetics
71 rdf:type schema:DefinedTerm
72 sg:journal.1135804 schema:issn 0040-5752
73 1432-2242
74 schema:name Theoretical and Applied Genetics
75 rdf:type schema:Periodical
76 sg:person.010002563627.69 schema:affiliation Nfe464a82ca954ca1a3374090bc01a912
77 schema:familyName Trouche
78 schema:givenName G.
79 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010002563627.69
80 rdf:type schema:Person
81 sg:person.01023335211.07 schema:affiliation N26133f934ffa4679ba3ac23d7cf663cd
82 schema:familyName Deu
83 schema:givenName M.
84 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01023335211.07
85 rdf:type schema:Person
86 sg:person.0653726260.70 schema:affiliation N2c879d5140f445cf86f3195546a7ddbb
87 schema:familyName Hamon
88 schema:givenName P.
89 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0653726260.70
90 rdf:type schema:Person
91 sg:person.0677432145.45 schema:affiliation N8a3e955e6c6f461eae2568f39b5c5125
92 schema:familyName Rami
93 schema:givenName J.-F.
94 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677432145.45
95 rdf:type schema:Person
 




Preview window. Press ESC to close (or click here)


...