Genetic basis of low-temperature-sensitive sterility in indica-japonica hybrids of rice as determined by RFLP analysis View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1997-11

AUTHORS

H. B. Li, J. Wang, A. M. Liu, K. D. Liu, Qifa Zhang, J. S. Zou

ABSTRACT

Low-temperature-sensitive sterility (LTSS) has become one of the major obstacles in indica-japonica hybrid rice breeding. In this study, we determined, using RFLP markers, the genetic basis of LTSS in two populations derived from crosses between indica and japonica parents, the BC1F1 of 3037/02428//3037 and the F2 of 3037/02428. The fertility segregation in the two populations under low-temperature conditions was used as a measurement of the temperature sensitivity of the various genotypes in the populations. A RFLP survey of bulked extremes from the BC1F1 population identified three genomic regions, two on chromosome 1 and one on chromosome 12, that were likely to contain genes for LTSS (or Ste loci). One-way ANOVA and QTL analysis using a total of 19 markers from these three genomic regions resolved three Ste loci in the BC1F1 population and two Ste loci in the F2 population. On the basis of chromosomal location these loci were distinct from those governing wide-compatibility identified in previous studies. Two- and three-way ANOVA showed that these loci acted essentially independent of each other in conditioning LTSS. The main mode of gene action was an interaction between the indica and the japonica alleles within each locus. For each respective locus this resulted in a drastic fertility reduction in the heterozygote state relative to the homozygote state. The results have significant implications in indica-japonica hybrid rice breeding programs. More... »

PAGES

1092-1097

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s001220050667

DOI

http://dx.doi.org/10.1007/s001220050667

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1003560198


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "name": [
            "Institute of Food Crops, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li", 
        "givenName": "H. B.", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Huazhong Agricultural University", 
          "id": "https://www.grid.ac/institutes/grid.35155.37", 
          "name": [
            "National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wang", 
        "givenName": "J.", 
        "id": "sg:person.010334725131.27", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010334725131.27"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Institute of Genetics, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Liu", 
        "givenName": "A. M.", 
        "id": "sg:person.011727666131.64", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.011727666131.64"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Huazhong Agricultural University", 
          "id": "https://www.grid.ac/institutes/grid.35155.37", 
          "name": [
            "National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Liu", 
        "givenName": "K. D.", 
        "id": "sg:person.010065057704.06", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010065057704.06"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Huazhong Agricultural University", 
          "id": "https://www.grid.ac/institutes/grid.35155.37", 
          "name": [
            "National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Zhang", 
        "givenName": "Qifa", 
        "id": "sg:person.0743740501.10", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0743740501.10"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Institute of Food Crops, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Zou", 
        "givenName": "J. S.", 
        "id": "sg:person.016310531131.98", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016310531131.98"
        ], 
        "type": "Person"
      }
    ], 
    "datePublished": "1997-11", 
    "datePublishedReg": "1997-11-01", 
    "description": "Low-temperature-sensitive sterility (LTSS) has become one of the major obstacles in indica-japonica hybrid rice breeding. In this study, we determined, using RFLP markers, the genetic basis of LTSS in two populations derived from crosses between indica and japonica parents, the BC1F1 of 3037/02428//3037 and the F2 of 3037/02428. The fertility segregation in the two populations under low-temperature conditions was used as a measurement of the temperature sensitivity of the various genotypes in the populations. A RFLP survey of bulked extremes from the BC1F1 population identified three genomic regions, two on chromosome 1 and one on chromosome 12, that were likely to contain genes for LTSS (or Ste loci). One-way ANOVA and QTL analysis using a total of 19 markers from these three genomic regions resolved three Ste loci in the BC1F1 population and two Ste loci in the F2 population. On the basis of chromosomal location these loci were distinct from those governing wide-compatibility identified in previous studies. Two- and three-way ANOVA showed that these loci acted essentially independent of each other in conditioning LTSS. The main mode of gene action was an interaction between the indica and the japonica alleles within each locus. For each respective locus this resulted in a drastic fertility reduction in the heterozygote state relative to the homozygote state. The results have significant implications in indica-japonica hybrid rice breeding programs.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s001220050667", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1135804", 
        "issn": [
          "0040-5752", 
          "1432-2242"
        ], 
        "name": "Theoretical and Applied Genetics", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "7", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "95"
      }
    ], 
    "name": "Genetic basis of low-temperature-sensitive sterility in indica-japonica hybrids of rice as determined by RFLP analysis", 
    "pagination": "1092-1097", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "10f5ec1ac6ca1fc734c5767d4f755e4591eec6c30f170e120aa3c755609f5c60"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s001220050667"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1003560198"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s001220050667", 
      "https://app.dimensions.ai/details/publication/pub.1003560198"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:33", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13104_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007%2Fs001220050667"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s001220050667'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s001220050667'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s001220050667'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s001220050667'


 

This table displays all metadata directly associated to this object as RDF triples.

101 TRIPLES      20 PREDICATES      27 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s001220050667 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author Nc128adbeb2d24b5faf37697f8e49b111
4 schema:datePublished 1997-11
5 schema:datePublishedReg 1997-11-01
6 schema:description Low-temperature-sensitive sterility (LTSS) has become one of the major obstacles in indica-japonica hybrid rice breeding. In this study, we determined, using RFLP markers, the genetic basis of LTSS in two populations derived from crosses between indica and japonica parents, the BC1F1 of 3037/02428//3037 and the F2 of 3037/02428. The fertility segregation in the two populations under low-temperature conditions was used as a measurement of the temperature sensitivity of the various genotypes in the populations. A RFLP survey of bulked extremes from the BC1F1 population identified three genomic regions, two on chromosome 1 and one on chromosome 12, that were likely to contain genes for LTSS (or Ste loci). One-way ANOVA and QTL analysis using a total of 19 markers from these three genomic regions resolved three Ste loci in the BC1F1 population and two Ste loci in the F2 population. On the basis of chromosomal location these loci were distinct from those governing wide-compatibility identified in previous studies. Two- and three-way ANOVA showed that these loci acted essentially independent of each other in conditioning LTSS. The main mode of gene action was an interaction between the indica and the japonica alleles within each locus. For each respective locus this resulted in a drastic fertility reduction in the heterozygote state relative to the homozygote state. The results have significant implications in indica-japonica hybrid rice breeding programs.
7 schema:genre research_article
8 schema:inLanguage en
9 schema:isAccessibleForFree false
10 schema:isPartOf Nefa101ffa51b42798903629ae1804b77
11 Nff25821415f0443f8ae50da4dfddb369
12 sg:journal.1135804
13 schema:name Genetic basis of low-temperature-sensitive sterility in indica-japonica hybrids of rice as determined by RFLP analysis
14 schema:pagination 1092-1097
15 schema:productId Na510b2da76d54e5e8e6fb57efef30778
16 Nd971cf9af7604d8d8cbb6558aeb7ce47
17 Nef7170eba48b4d8eb7f997de11709a3b
18 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003560198
19 https://doi.org/10.1007/s001220050667
20 schema:sdDatePublished 2019-04-11T14:33
21 schema:sdLicense https://scigraph.springernature.com/explorer/license/
22 schema:sdPublisher N2b5f8205e1cb4dd590043d626a3074e1
23 schema:url http://link.springer.com/10.1007%2Fs001220050667
24 sgo:license sg:explorer/license/
25 sgo:sdDataset articles
26 rdf:type schema:ScholarlyArticle
27 N15d40bf728c24f5bada01b94b47cf70c schema:affiliation N5b14fae061f940d3a365e6dcc8c03372
28 schema:familyName Li
29 schema:givenName H. B.
30 rdf:type schema:Person
31 N2b5f8205e1cb4dd590043d626a3074e1 schema:name Springer Nature - SN SciGraph project
32 rdf:type schema:Organization
33 N399162545a6e4f948f291220fae4afdb schema:name Institute of Genetics, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN
34 rdf:type schema:Organization
35 N5852b71a45eb419ca975ab95848d487c rdf:first sg:person.016310531131.98
36 rdf:rest rdf:nil
37 N5b14fae061f940d3a365e6dcc8c03372 schema:name Institute of Food Crops, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN
38 rdf:type schema:Organization
39 Na510b2da76d54e5e8e6fb57efef30778 schema:name dimensions_id
40 schema:value pub.1003560198
41 rdf:type schema:PropertyValue
42 Na721642d80f04b4493a6997184a7e0df rdf:first sg:person.011727666131.64
43 rdf:rest Ne8564ae17b6543c49480f9a93cc6edd2
44 Nc128adbeb2d24b5faf37697f8e49b111 rdf:first N15d40bf728c24f5bada01b94b47cf70c
45 rdf:rest Ncbb31907fcf5418291f279d366b05f02
46 Ncbb31907fcf5418291f279d366b05f02 rdf:first sg:person.010334725131.27
47 rdf:rest Na721642d80f04b4493a6997184a7e0df
48 Nd971cf9af7604d8d8cbb6558aeb7ce47 schema:name readcube_id
49 schema:value 10f5ec1ac6ca1fc734c5767d4f755e4591eec6c30f170e120aa3c755609f5c60
50 rdf:type schema:PropertyValue
51 Ne8564ae17b6543c49480f9a93cc6edd2 rdf:first sg:person.010065057704.06
52 rdf:rest Nf4e0b02871714351be99fd784ffefb58
53 Ne9bcd29bc42146ffa6a8a01f4f901be9 schema:name Institute of Food Crops, Agricultural Academy of Jiangsu Province, Nanjing 210014, China, CN
54 rdf:type schema:Organization
55 Nef7170eba48b4d8eb7f997de11709a3b schema:name doi
56 schema:value 10.1007/s001220050667
57 rdf:type schema:PropertyValue
58 Nefa101ffa51b42798903629ae1804b77 schema:volumeNumber 95
59 rdf:type schema:PublicationVolume
60 Nf4e0b02871714351be99fd784ffefb58 rdf:first sg:person.0743740501.10
61 rdf:rest N5852b71a45eb419ca975ab95848d487c
62 Nff25821415f0443f8ae50da4dfddb369 schema:issueNumber 7
63 rdf:type schema:PublicationIssue
64 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
65 schema:name Biological Sciences
66 rdf:type schema:DefinedTerm
67 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
68 schema:name Genetics
69 rdf:type schema:DefinedTerm
70 sg:journal.1135804 schema:issn 0040-5752
71 1432-2242
72 schema:name Theoretical and Applied Genetics
73 rdf:type schema:Periodical
74 sg:person.010065057704.06 schema:affiliation https://www.grid.ac/institutes/grid.35155.37
75 schema:familyName Liu
76 schema:givenName K. D.
77 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010065057704.06
78 rdf:type schema:Person
79 sg:person.010334725131.27 schema:affiliation https://www.grid.ac/institutes/grid.35155.37
80 schema:familyName Wang
81 schema:givenName J.
82 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010334725131.27
83 rdf:type schema:Person
84 sg:person.011727666131.64 schema:affiliation N399162545a6e4f948f291220fae4afdb
85 schema:familyName Liu
86 schema:givenName A. M.
87 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.011727666131.64
88 rdf:type schema:Person
89 sg:person.016310531131.98 schema:affiliation Ne9bcd29bc42146ffa6a8a01f4f901be9
90 schema:familyName Zou
91 schema:givenName J. S.
92 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016310531131.98
93 rdf:type schema:Person
94 sg:person.0743740501.10 schema:affiliation https://www.grid.ac/institutes/grid.35155.37
95 schema:familyName Zhang
96 schema:givenName Qifa
97 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0743740501.10
98 rdf:type schema:Person
99 https://www.grid.ac/institutes/grid.35155.37 schema:alternateName Huazhong Agricultural University
100 schema:name National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China, CN
101 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...