Identification of co-located QTLs and genomic regions affecting grapevine cluster architecture View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2018-12-19

AUTHORS

Robert Richter, Doreen Gabriel, Florian Rist, Reinhard Töpfer, Eva Zyprian

ABSTRACT

Loose cluster architecture is an important aim in grapevine breeding since it has high impact on the phytosanitary status of grapes. This investigation analyzed the contributions of individual cluster sub-traits to the overall trait of cluster architecture. Six sub-traits showed large impact on cluster architecture as major determinants. They explained 57% of the OIV204 descriptor for cluster compactness rating in a highly diverse cross-population of 149 genotypes. Genetic analysis revealed several genomic regions involved in the expression of this trait. Based on the linkage of phenotypic features to molecular markers, QTL calculations shed new light on the genetic determinants of cluster architecture. Eight QTL clusters harbor overlapping confidence intervals of up to four co-located QTLs. A physical projection of the QTL clusters by confidence interval-flanking markers onto the PN40024 reference genome sequence revealed genes enriched in these regions. More... »

PAGES

1159-1177

References to SciGraph publications

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  • 2003-03. Identification of a copper transporter family in Arabidopsis thaliana in PLANT MOLECULAR BIOLOGY
  • 2014-02-21. Heritability and identification of QTLs and underlying candidate genes associated with the architecture of the grapevine cluster (Vitis vinifera L.) in THEORETICAL AND APPLIED GENETICS
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  • 2016-06-28. Genetic dissection of quantitative trait loci for berry traits in interspecific hybrid grape (Vitis labruscana × Vitis vinifera) in EUPHYTICA
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s00122-018-3269-1

    DOI

    http://dx.doi.org/10.1007/s00122-018-3269-1

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1110764874

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/30569367


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