Map-based cloning of the dominant genic male sterile Ms-cd1 gene in cabbage (Brassica oleracea) View Full Text


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Article Info

DATE

2017-01

AUTHORS

Jianli Liang, Yuan Ma, Jian Wu, Feng Cheng, Bo Liu, Xiaowu Wang

ABSTRACT

KEY MESSAGE: Using map-based cloning, we delimited the Ms - cd1 gene responsible for the male sterile phenotype in B. oleracea to an approximately 39-kb fragment. Expression analysis suggests that a new predicted gene, a homolog of the Arabidopsis SIED1 gene, is a potential candidate gene. A dominant genic male sterile (DGMS) mutant 79-399-3 in Brassica oleracea (B. oleracea) is controlled by a single gene named Ms-cd1, which was genetically mapped on chromosome C09. The derived DGMS lines of 79-399-3 have been successfully applied in hybrid cabbage breeding and commercial hybrid seed production of several B. oleracea cultivars in China. However, the Ms-cd1 gene responsible for the DGMS has not been identified, and the molecular basis of the DGMS is unclear, which then limits its widespread application in hybrid cabbage seed production. In the present study, a large BC9 population with 12,269 individuals was developed for map-based cloning of the Ms-cd1 gene, and Ms-cd1 was mapped to a 39.4-kb DNA fragment between two InDel markers, InDel14 and InDel24. Four genes were identified in this region, including two annotated genes based on the available B. oleracea annotation database and two new predicted open reading frames (ORFs). Finally, a newly predicted ORF designated Bol357N3 was identified as the candidate of the Ms-cd1 gene. These results will be useful to reveal the molecular mechanism of the DGMS and develop more practical DGMS lines with stable male sterility for hybrid seed production in cabbage. More... »

PAGES

71-79

References to SciGraph publications

  • 1999-05. Rates of Nucleotide Substitution in Angiosperm Mitochondrial DNA Sequences and Dates of Divergence Between Brassica and Other Angiosperm Lineages in JOURNAL OF MOLECULAR EVOLUTION
  • 2013-08. Gene identification using rice genome sequences in GENES & GENOMICS
  • 2008-01. Global analysis of gene expression in flower buds of Ms-cd1Brassica oleracea conferring male sterility by using an Arabidopsis microarray in PLANT MOLECULAR BIOLOGY
  • 2011-12. BRAD, the genetics and genomics database for Brassica plants in BMC PLANT BIOLOGY
  • 2000-04. An extended random primer amplified region (ERPAR) marker linked to a dominant male sterility gene in cabbage (Brassica oleracea var. capitata) in EUPHYTICA
  • 2011-10. The genome of the mesopolyploid crop species Brassica rapa in NATURE GENETICS
  • 2014-06. Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea in GENOME BIOLOGY
  • 1997-11. A male sterile line with dominant gene (Ms) in cabbage (Brassica oleracea var. capitata) and its utilization for hybrid seed production in EUPHYTICA
  • 2012-04. Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA in CELL RESEARCH
  • 2014-12. The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes in NATURE COMMUNICATIONS
  • 2014-12. RNase ZS1 processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice in NATURE COMMUNICATIONS
  • 2012-02. Genome sequencing reveals agronomically important loci in rice using MutMap in NATURE BIOTECHNOLOGY
  • 2011-07. Fine mapping of a male sterility gene MS-cd1 in Brassica oleracea in THEORETICAL AND APPLIED GENETICS
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    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/27704179


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