QTL analysis reveals context-dependent loci for seed glucosinolate trait in the oilseed Brassica juncea: importance of recurrent selection backcross scheme ... View Full Text


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Article Info

DATE

2007-12

AUTHORS

N. Ramchiary, N. C. Bisht, V. Gupta, A. Mukhopadhyay, N. Arumugam, Y. S. Sodhi, D. Pental, A. K. Pradhan

ABSTRACT

Seed glucosinolate content in Brassica juncea is a complex quantitative trait. A recurrent selection backcross (RSB) method with a doubled haploid (DH) generation interspersing backcross generations was used for the introgression of low glucosinolate alleles from an east European gene pool B. juncea line, Heera into an Indian gene pool variety, Varuna. Phenotypic comparisons among the DH populations derived from early to advanced backcrosses revealed a shift in the mean values for various glucosinolates with the advancement of backcrossing, indicating a change in the selective values of the alleles with change in the genetic background due to the existence of epistasis and context dependencies. QTL mapping for various seed glucosinolates from early (F(1)DH) and advanced generation (BC(4)DH) populations confirmed the presence of epistasis and context dependency. The common QTL detected in both F(1)DH and BC(4)DH changed their R (2) values from the former to the later generation. Some of the QTL detected in the F(1)DH became irrelevant in the BC(4)DH population. Further, new QTL were detected in the BC(4)DH population for various glucosinolates. A validation study on a population of low glucosinolate DH lines derived from all the backcross generations of the RSB breeding programme revealed that the QTL detected in BC(4)DH were the 'true' QTL. Using glucosinolate as an example, the study provides strong evidence for the importance of the RSB method for the identification of the 'true' QTL which would be significant for marker assisted introgression of a complex quantitative trait whose expression is influenced by epistatic interactions. More... »

PAGES

77-85

References to SciGraph publications

  • 1993-01. Heterosis breeding in Indian mustard (Brassica juncea L. Czern & Coss): Analysis of component characters contributing to heterosis for yield in EUPHYTICA
  • 1994. Extraction of total cellular DNA from plants, algae and fungi in PLANT MOLECULAR BIOLOGY MANUAL
  • 2001-02. AFLP-based genetic diversity assessment amongst agronomically important natural and some newly synthesized lines of Brassica juncea in THEORETICAL AND APPLIED GENETICS
  • 2004-08. Genetic analysis of agronomic and quality traits in mustard (Brassica juncea) in THEORETICAL AND APPLIED GENETICS
  • 2007-07. High-density Brassica oleracea linkage map: identification of useful new linkages in THEORETICAL AND APPLIED GENETICS
  • 2003-02. A high-density linkage map in Brassica juncea (Indian mustard) using AFLP and RFLP markers in THEORETICAL AND APPLIED GENETICS
  • 2004-08. Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds in THEORETICAL AND APPLIED GENETICS
  • 2007-10. Mapping of yield influencing QTL in Brassica juncea: implications for breeding of a major oilseed crop of dryland areas in THEORETICAL AND APPLIED GENETICS
  • 2001-07. Evaluation of near-isogenic lines of rice introgressed with QTLs for root depth through marker-aided selection in THEORETICAL AND APPLIED GENETICS
  • 2006-08. Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 1. Identification of genomic regions from winter germplasm in THEORETICAL AND APPLIED GENETICS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s00122-007-0648-4

    DOI

    http://dx.doi.org/10.1007/s00122-007-0648-4

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1024421095

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/17898985


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