AFLP and SSR polymorphism in a Coffea interspecific backcross progeny [(C. heterocalyx × C. canephora) × C. canephora] View Full Text


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Article Info

DATE

2003-10

AUTHORS

I. Coulibaly, B. Revol, M. Noirot, V. Poncet, M. Lorieux, C. Carasco-Lacombe, J. Minier, M. Dufour, P. Hamon

ABSTRACT

An interspecific cross (BC 1) involving a species with one of the largest genomes in the Coffea genus [ Coffea heterocalyx (HET), qDNA = 1.74 pg] and a species with a medium-sized genome [ Coffea canephora (CAN), qDNA = 1.43 pg] was studied using two types of molecular markers, AFLP and SSR. One hundred and eighty eight AFLP bands and 34 SSR primer pairs were suitable for mapping. The total map length was 1,360 cM with 190 loci distributed in 15 linkage groups. The results were compared to those obtained previously on an interspecific BC 1 progeny involving a species with a medium-sized genome ( Coffea liberica var dewevrei, DEW) and a species with one of the smallest genomes ( Coffea pseudozanguebariae, PSE). They are discussed relative to three main points: (1) the relevance of the different marker types, (2) the genomic distribution of AFLP and SSR markers, and (3) the relation between AFLP polymorphism and genome size. More... »

PAGES

1148-1155

References to SciGraph publications

  • 2000-01. A saturated genetic linkage map of rubber tree (Hevea spp.) based on RFLP, AFLP, microsatellite, and isozyme markers in THEORETICAL AND APPLIED GENETICS
  • 2002-10. Studies of the transferability of microsatellites derived from Triticum tauschii to hexaploid wheat and to diploid related species using amplification, hybridization and sequence comparisons in THEORETICAL AND APPLIED GENETICS
  • 1997-06. Phylogenetic relationships of coffee-tree species (Coffea L.) as inferred from ITS sequences of nuclear ribosomal DNA in THEORETICAL AND APPLIED GENETICS
  • 2001-07. A kiwifruit (Actinidia spp.) linkage map based on microsatellites and integrated with AFLP markers in THEORETICAL AND APPLIED GENETICS
  • 1995-01. Combined mapping of AFLP and RFLP markers in barley in MOLECULAR GENETICS AND GENOMICS
  • 2002-07. Development of microsatellite markers in peach [Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry (Prunus avium L.) in THEORETICAL AND APPLIED GENETICS
  • 2000. Microsatellites in Coffea Arabica L. in COFFEE BIOTECHNOLOGY AND QUALITY
  • 1999-02. Towards a saturated sorghum map using RFLP and AFLP markers in THEORETICAL AND APPLIED GENETICS
  • 1999-09. DNA methylation and AFLP marker distribution in the soybean genome in THEORETICAL AND APPLIED GENETICS
  • 2000-09. Interspecific genetic linkage map, segregation distortion and genetic conversion in coffee (Coffea sp.) in THEORETICAL AND APPLIED GENETICS
  • 1988-01. Constraints upon the organisation and evolution of chromosomes in Allium in THEORETICAL AND APPLIED GENETICS
  • 1994-11. Hypomethylated sequences: Characterization of the duplicate soybean genome in MOLECULAR GENETICS AND GENOMICS
  • 1998-02. Relationship between parental chromosomic contribution and nuclear DNA content in the coffee interspecific hybrid C. pseudozanguebariae×C. liberica var ‘dewevrei’ in THEORETICAL AND APPLIED GENETICS
  • 2002-11. Introgression of self-compatibility from Coffea heterocalyx to the cultivated species Coffea canephora in THEORETICAL AND APPLIED GENETICS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/s00122-003-1355-4

    DOI

    http://dx.doi.org/10.1007/s00122-003-1355-4

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1009963178

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/12879256


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